Nucleotide Global Alignment

Description

Query:
TRCN0000473331
Subject:
NM_001142570.1
Aligned Length:
1882
Identities:
1192
Gaps:
551

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGTCTCTGCACCTCCGGTGATCTCTGCAACTTCCAGCAGCGCCGGCGTCCCGGGGGGTTTATTCCGGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGAACCCCTGTATTCGTCTCCAGGAGAGCCCCCTCGCCTAACCCCTAACATGATCAACAGTTTCATGGCCAATA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACCATAACGGCAGTGTCTTGGGTGGCGGGATTGGTGGTGGCAGCGGTGGCAGCAGCAACACCAACACAAACGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCCGGATGGTCGACATGCACGGGGTGAAGGTAGCTTCATTCCTGATGGATGGCCAGGAACTGATCTGCCTGCC  296

Query    1  ----------------------------------------------------------ATGC--CAGAGTTTCG  14
                                                                      |.||  .||||..|||
Sbjct  297  GCAAGTCTTTGACCTTTTCCTCAAGCACCTGGTGGGAGGGTTGCACACAGTGTACACTAAGCTGAAGAGACTCG  370

Query   15  ------CTC---TGTTGCCCAGGCTGCAGTGCA--------------GTGGTGTG------ATC---------T  50
                  |||   ||.||..||  |||.||.|||              ||||..||      |||         .
Sbjct  371  ACATATCTCCGGTGGTGTGCA--CTGTAGAGCAAGTTCGAATCCTCCGTGGGCTGGGGGCCATCCAGCCAGGGG  442

Query   51  TGGCTCGCTGCAA-CTTCCGCCTC-CCAGG-------TTCAAGGGATTCTTGTGCCTCAGCCTCCCGAGTAGCT  115
            ||..|||.||||| ||    |.|| |||||       ||.||   |.| ||||   |||     |||| |.||.
Sbjct  443  TGAATCGTTGCAAGCT----CATCACCAGGAAAGACTTTGAA---ACT-TTGT---TCA-----CCGA-TTGCA  499

Query  116  GGAATTACAGTTCAAGACCCGGCAGGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCTG  189
            ..||...|||||||||.||.|||||||||||||||||||||||||||||.|||||.||.||||||||.||||||
Sbjct  500  CCAACGCCAGTTCAAGGCCTGGCAGGCCCCCTAAGCGTTCTTTGGGAGTATTGCAAGATAATGCCCGACTTCTG  573

Query  190  ACCCATGCAGTCCCAGGCCTCTTATCGCCAGGACTTATCACTCCGACAGGTATAACAGCTGCAGCGATGGCTGA  263
            .|||||||||||||||||||||||||.||||||||.||||||||.||||||||.||||||||||||||||||||
Sbjct  574  CCCCATGCAGTCCCAGGCCTCTTATCACCAGGACTGATCACTCCAACAGGTATCACAGCTGCAGCGATGGCTGA  647

Query  264  GGCGATGAAACTTCAGAAGATGAAGCTTATGGCTATGAACACTCTTCAGGGAAATGGAAGCCAAAATGGGACCG  337
            |||.|||||.||.||||||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||.|
Sbjct  648  GGCCATGAAGCTCCAGAAGATGAAGCTTATGGCAATGAATACTCTTCAGGGTAATGGAAGCCAAAATGGGACTG  721

Query  338  AATCAGAGCCTGATGATCTTAATTCTAACACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCT  411
            |.||||||||.|||||.||||||||||..||||||||||||||||||||||||||||||||||||||.||.|||
Sbjct  722  AGTCAGAGCCAGATGACCTTAATTCTACGACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATACAATCT  795

Query  412  CCATTTGCTGCACCTGGACCCCAACATGGAATTGCTCATGCAGCCCTAGCTGGCCAGCCAGGCATTGGGGGTGC  485
            |||.|||||||..|||||||.|||||||||||||||||||||||.||.|||||.|||||||||.||||.|||||
Sbjct  796  CCACTTGCTGCTTCTGGACCTCAACATGGAATTGCTCATGCAGCACTTGCTGGTCAGCCAGGCCTTGGAGGTGC  869

Query  486  TCCAACCCTCAATCCACTGCAGCAGAACCACCTGCTAACCAATAGACTGGATCTGCCATTTATGATGATGCCTC  559
            |||.|||||.||||||||.||||||||.||||||||||.||||.|.||||||||.|||||||||||||||||||
Sbjct  870  TCCGACCCTTAATCCACTTCAGCAGAATCACCTGCTAAGCAATCGTCTGGATCTCCCATTTATGATGATGCCTC  943

Query  560  ATCCCCTACTTCCAGTCAGCTTACCTCCTGCATCAGTTGCCATGGCAATGAATCAGATGAACCATCTCAATACT  633
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  944  ATCCCCTACTTCCAGTCAGCTTACCTCCTGCATCAGTTGCCATGGCAATGAATCAGATGAATCATCTCAATACT  1017

Query  634  ATTGCCAACATGGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTGTTATAAAGGAGCG  707
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||.||||||||||||||||.||
Sbjct 1018  ATTGCCAACATGGCTGCTGCAGCCCAGATTCACAGTCCACTCTCCAGAGCTGGTGCCTCTGTTATAAAGGAACG  1091

Query  708  GATCCCAGAGAGTCCTTCTCCTGCTCCTTCTCTAGAAGAGAATCATCGTCCTGGGAGCCAGACCTCTTCCCACA  781
            |||||||||||||||||||||||||||.|||||.|||||||.||||||||||||||||||||||||.||||||.
Sbjct 1092  GATCCCAGAGAGTCCTTCTCCTGCTCCCTCTCTGGAAGAGAGTCATCGTCCTGGGAGCCAGACCTCCTCCCACC  1165

Query  782  CCAGCAGCAGTGTGTCCAGCTCTCCCTCTCAGATGGATCATCATTTGGAAAGAATG------------------  837
            |.||||||||||||||||||||||||||.||||||||||||||||..||.||||||                  
Sbjct 1166  CAAGCAGCAGTGTGTCCAGCTCTCCCTCGCAGATGGATCATCATTCAGAGAGAATGGTTATGATGCCCAACAAT  1239

Query  838  ------------------------------------------------------------------GAAGAGGT  845
                                                                              |||||.||
Sbjct 1240  CGAGAAGAGCTTATTGTTGACCAAGATAATGGACAAAGCATAAAAAAATTCCAGAGGGATAATAAAGAAGAAGT  1313

Query  846  ACCAGTTCAAATTCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCCCGCTG  919
            |||||.||||||.|||.|.|||||||||||||||||.|||||.|||.||.|||||||.||||||||||...|||
Sbjct 1314  ACCAGCTCAAATCCCAGTCATGAAGTCACCCTTGGATAAGATCCAGTTGGCTCCTGGACAGGCATTGCATCCTG  1387

Query  920  GATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAGGGTCTG  993
            |||||||||||||||||||||||||.||||||||.||.||.||||||||||||||||||||||||||||||||.
Sbjct 1388  GATTCCCTGGACCATTCATTTTTGCAGATAGTCTATCTTCTGTGGAGACTCTGTTGACCAACATTCAGGGTCTA  1461

Query  994  CTGAAAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAGCAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGA  1067
            ||||||||.|||||||||||||||||.||||||||||||||||||||.||.|||||||||||.||||||.|.||
Sbjct 1462  CTGAAAGTGGCTTTGGATAATGCTCGTATCCAGGAGAAGCAGATTCAGCAGGAAAAGAAGGAACTGCGAATAGA  1535

Query 1068  GCTCTATAGAGAGAGAGAAATTAGAGAAAACCTTGAAAGACAACTTGCAGTTGAGCTTCAAAGCAGAACTACTA  1141
            |||||..|||||.||||||||||||||||||||.||..||||||||||||||||||||||||||||||.|||.|
Sbjct 1536  GCTCTTCAGAGAAAGAGAAATTAGAGAAAACCTGGAGCGACAACTTGCAGTTGAGCTTCAAAGCAGAAGTACAA  1609

Query 1142  TGCAAAAGCGCCTGAAGAAGGAGAAAAAAACCAAGAGAAAATTGCAGGAAGCCTTGGAATTTGAATCAAAGCGC  1215
            ||||||||||.|||||.||.||||||||..|.|||||||||.|.||||||||||||||||||||||||||||||
Sbjct 1610  TGCAAAAGCGTCTGAAAAAAGAGAAAAAGGCTAAGAGAAAACTTCAGGAAGCCTTGGAATTTGAATCAAAGCGC  1683

Query 1216  CGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACTAGTGACAGTGGCCTGAGGATGTTAAAAGATACTGG  1289
            ||.||||||||||||||.||||||||.|||||.||..||.||||||||||.|||||.||||||||||||.||||
Sbjct 1684  CGCGAGCAAGTGGAGCAAGCACTTAAACAAGCTACATCTGGTGACAGTGGACTGAGAATGTTAAAAGATTCTGG  1757

Query 1290  AATTCCAGATATTGAAATAGAAAACAATGGGACTCCTCATGATAGTGCTGCTATGCAAGGAGGTAACTATTACT  1363
            ||||||||||||||||||||||||||.|||.||.||.|||||.||||||||||||||||..             
Sbjct 1758  AATTCCAGATATTGAAATAGAAAACAGTGGAACGCCGCATGACAGTGCTGCTATGCAAGCC-------------  1818

Query 1364  GTTTAGAAATGGCACAACAGTTGTATTCAGCC  1395
                                            
Sbjct 1819  --------------------------------  1818

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