Nucleotide Global Alignment

Description

Query:
TRCN0000473331
Subject:
XM_011247714.1
Aligned Length:
1917
Identities:
1240
Gaps:
540

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATCAACAGTTTCATGGCCAATAACCATAACGGCAGTGTCTTGGGTGGCGGGATTGGTGGTGGCAGCGGTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGCAGCAACACCAACACAAACGAGTGCCGGATGGTCGACATGCACGGGGTGAAGGTAGCTTCATTCCTGATGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATGGCCAGGAACTGATCTGCCTGCCGCAAGTCTTTGACCTTTTCCTCAAGCACCTGGTGGGAGGGTTGCACACA  222

Query    1  ---------ATGC--CAGAGTTTCG------CTC---TGTTGCCCAGGCTGCAGTGCA--------------GT  40
                     |.||  .||||..|||      |||   ||.||..||  |||.||.|||              ||
Sbjct  223  GTGTACACTAAGCTGAAGAGACTCGACATATCTCCGGTGGTGTGCA--CTGTAGAGCAAGTTCGAATCCTCCGT  294

Query   41  GGTGTG------ATC---------TTGGCTCGCTGCAA-CTTCCGCCTC-CCAGG-------TTCAAGGGATTC  90
            ||..||      |||         .||..|||.||||| ||    |.|| |||||       ||.||   |.| 
Sbjct  295  GGGCTGGGGGCCATCCAGCCAGGGGTGAATCGTTGCAAGCT----CATCACCAGGAAAGACTTTGAA---ACT-  360

Query   91  TTGTGCCTCAGCCTCCCGAGT-----------AGCTGGAA---------------------------TTACAGT  126
            ||||   |||     ||||.|           ||..||||                           |.|||||
Sbjct  361  TTGT---TCA-----CCGATTGCACCAACGCCAGAAGGAAGAGGCAAATGACAAGGAAACAAGCTGTTAACAGT  426

Query  127  TCAAGACCCGGCAGGCCCCCTAAGCGTTCTTTGGGAGTGTTGCAGGAAAATGCCCGCCTTCTGACCCATGCAGT  200
            |||||.||.|||||||||||||||||||||||||||||.|||||.||.||||||||.||||||.||||||||||
Sbjct  427  TCAAGGCCTGGCAGGCCCCCTAAGCGTTCTTTGGGAGTATTGCAAGATAATGCCCGACTTCTGCCCCATGCAGT  500

Query  201  CCCAGGCCTCTTATCGCCAGGACTTATCACTCCGACAGGTATAACAGCTGCAGCGATGGCTGAGGCGATGAAAC  274
            |||||||||||||||.||||||||.||||||||.||||||||.|||||||||||||||||||||||.|||||.|
Sbjct  501  CCCAGGCCTCTTATCACCAGGACTGATCACTCCAACAGGTATCACAGCTGCAGCGATGGCTGAGGCCATGAAGC  574

Query  275  TTCAGAAGATGAAGCTTATGGCTATGAACACTCTTCAGGGAAATGGAAGCCAAAATGGGACCGAATCAGAGCCT  348
            |.||||||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||.||.||||||||.
Sbjct  575  TCCAGAAGATGAAGCTTATGGCAATGAATACTCTTCAGGGTAATGGAAGCCAAAATGGGACTGAGTCAGAGCCA  648

Query  349  GATGATCTTAATTCTAACACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATGCAGTCTCCATTTGCTGC  422
            |||||.||||||||||..||||||||||||||||||||||||||||||||||||||.||.||||||.|||||||
Sbjct  649  GATGACCTTAATTCTACGACAGGTGGAAGTGAATCCTCCTGGGATAAAGATAAGATACAATCTCCACTTGCTGC  722

Query  423  ACCTGGACCCCAACATGGAATTGCTCATGCAGCCCTAGCTGGCCAGCCAGGCATTGGGGGTGCTCCAACCCTCA  496
            ..|||||||.|||||||||||||||||||||||.||.|||||.|||||||||.||||.||||||||.|||||.|
Sbjct  723  TTCTGGACCTCAACATGGAATTGCTCATGCAGCACTTGCTGGTCAGCCAGGCCTTGGAGGTGCTCCGACCCTTA  796

Query  497  ATCCACTGCAGCAGAACCACCTGCTAACCAATAGACTGGATCTGCCATTTATGATGATGCCTCATCCCCTACTT  570
            |||||||.||||||||.||||||||||.||||.|.||||||||.||||||||||||||||||||||||||||||
Sbjct  797  ATCCACTTCAGCAGAATCACCTGCTAAGCAATCGTCTGGATCTCCCATTTATGATGATGCCTCATCCCCTACTT  870

Query  571  CCAGTCAGCTTACCTCCTGCATCAGTTGCCATGGCAATGAATCAGATGAACCATCTCAATACTATTGCCAACAT  644
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  871  CCAGTCAGCTTACCTCCTGCATCAGTTGCCATGGCAATGAATCAGATGAATCATCTCAATACTATTGCCAACAT  944

Query  645  GGCTGCTGCAGCACAGATTCACAGTCCACTCTCCAGAGCTGGTACCTCTGTTATAAAGGAGCGGATCCCAGAGA  718
            ||||||||||||.||||||||||||||||||||||||||||||.||||||||||||||||.|||||||||||||
Sbjct  945  GGCTGCTGCAGCCCAGATTCACAGTCCACTCTCCAGAGCTGGTGCCTCTGTTATAAAGGAACGGATCCCAGAGA  1018

Query  719  GTCCTTCTCCTGCTCCTTCTCTAGAAGAGAATCATCGTCCTGGGAGCCAGACCTCTTCCCACACCAGCAGCAGT  792
            ||||||||||||||||.|||||.|||||||.||||||||||||||||||||||||.||||||.|.|||||||||
Sbjct 1019  GTCCTTCTCCTGCTCCCTCTCTGGAAGAGAGTCATCGTCCTGGGAGCCAGACCTCCTCCCACCCAAGCAGCAGT  1092

Query  793  GTGTCCAGCTCTCCCTCTCAGATGGATCATCATTTGGAAAGAATGG----------------------------  838
            |||||||||||||||||.||||||||||||||||..||.|||||||                            
Sbjct 1093  GTGTCCAGCTCTCCCTCGCAGATGGATCATCATTCAGAGAGAATGGTTATGATGCCCAACAATCGAGAAGAGCT  1166

Query  839  --------------------------------------------------------------------------  838
                                                                                      
Sbjct 1167  TATTGTTGACCAAGATAATGGACAAAGCATAAAAAAATTCCAGAGGGATAATAAAGATATCCAATTGTCCCAGC  1240

Query  839  ------------------------------------------------------------------------AA  840
                                                                                    ||
Sbjct 1241  ACCATTTGTTGAACACTTTTCTTCACTGGATTGAGTTGGCACCATTATCAAAAAAATCACTTCACCATCAAAAA  1314

Query  841  GAGGTACCAGTTCAAATTCCAATAATGAAGTCACCCTTGGACAAGATACAGCTGACTCCTGGGCAGGCATTGCC  914
            ||.|||||||.||||||.|||.|.|||||||||||||||||.|||||.|||.||.|||||||.||||||||||.
Sbjct 1315  GAAGTACCAGCTCAAATCCCAGTCATGAAGTCACCCTTGGATAAGATCCAGTTGGCTCCTGGACAGGCATTGCA  1388

Query  915  CGCTGGATTCCCTGGACCATTCATTTTTGCTGATAGTCTGTCCTCCGTGGAGACTCTGTTGACCAACATTCAG-  987
            ..||||||||||||||||||||||||||||.||||||||.||.||.||||||||||||||||||||||||||| 
Sbjct 1389  TCCTGGATTCCCTGGACCATTCATTTTTGCAGATAGTCTATCTTCTGTGGAGACTCTGTTGACCAACATTCAGG  1462

Query  988  -----------------------------GGTCTGCTGAAAGTTGCTTTGGATAATGCTCGCATCCAGGAGAAG  1032
                                         |||||.||||||||.|||||||||||||||||.||||||||||||
Sbjct 1463  TCAACAATATTTCTATAAACAAAATAAATGGTCTACTGAAAGTGGCTTTGGATAATGCTCGTATCCAGGAGAAG  1536

Query 1033  CAGATTCAACAAGAAAAGAAGGAGCTGCGACTGGAGCTCTATAGAGAGAGAGAAATTAGAGAAAACCTTGAAAG  1106
            ||||||||.||.|||||||||||.||||||.|.|||||||..|||||.||||||||||||||||||||.||..|
Sbjct 1537  CAGATTCAGCAGGAAAAGAAGGAACTGCGAATAGAGCTCTTCAGAGAAAGAGAAATTAGAGAAAACCTGGAGCG  1610

Query 1107  ACAACTTGCAGTTGAGCTTCAAAGCAGAACTACTATGCAAAAGCGCCTGAAGAAGGAGAAAAAAACCAAGAGAA  1180
            |||||||||||||||||||||||||||||.|||.|||||||||||.|||||.||.||||||||..|.|||||||
Sbjct 1611  ACAACTTGCAGTTGAGCTTCAAAGCAGAAGTACAATGCAAAAGCGTCTGAAAAAAGAGAAAAAGGCTAAGAGAA  1684

Query 1181  AATTGCAGGAAGCCTTGGAATTTGAATCAAAGCGCCGGGAGCAAGTGGAGCAGGCACTTAAGCAAGCCACCACT  1254
            ||.|.||||||||||||||||||||||||||||||||.||||||||||||||.||||||||.|||||.||..||
Sbjct 1685  AACTTCAGGAAGCCTTGGAATTTGAATCAAAGCGCCGCGAGCAAGTGGAGCAAGCACTTAAACAAGCTACATCT  1758

Query 1255  AGTGACAGTGGCCTGAGGATGTTAAAAGATACTGGAATTCCAGATATTGAAATAGAAAACAATGGGACTCCTCA  1328
            .||||||||||.|||||.||||||||||||.||||||||||||||||||||||||||||||.|||.||.||.||
Sbjct 1759  GGTGACAGTGGACTGAGAATGTTAAAAGATTCTGGAATTCCAGATATTGAAATAGAAAACAGTGGAACGCCGCA  1832

Query 1329  TGATAGTGCTGCTATGCAAGGAGGTAACTATTACTGTTTAGAAATGGCACAACAGTTGTATTCAGCC  1395
            |||.|||||||||||||||||||||||||||||||||||||.|||||||||.|||||||.|||||||
Sbjct 1833  TGACAGTGCTGCTATGCAAGGAGGTAACTATTACTGTTTAGCAATGGCACAGCAGTTGTGTTCAGCC  1899

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