Nucleotide Global Alignment

Description

Query:
TRCN0000473343
Subject:
NR_163139.1
Aligned Length:
4923
Identities:
198
Gaps:
4698

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGCGGATCCCGTGGAATGACGGTGACGCCGCGGCGGGCGGATTGACTTCTAAAGAATCTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGGAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGGACTCATCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGCCAAGGAAGTCCTCACTGACTCTTTGAGAACTCTATATATGCAAACCCTTTGGGATGGCCACTAAATTTGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGAGTATGGTAACGTGGTTGACTGAACCACAGCCATGAAAGTGAGCTTCCAGCTCTTCTGCTGTTGCACCGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGTCCACATTGCCAGCATTGATGGAACGGGCATCAGCCTCCATCTTCTCCTCAATGGACGTGATCACTGGGCCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCATTGCCTGGAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATTTTCGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTGTCACCCAGGCTAAAGTGCAGTGGTGTCACCTCGGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAATT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGATATCTCTTCCAAATGCATGATGAAGACATTCTTCTCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACATTGGAGATTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAAAGAAGATGAAACAAATGACCATG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTGCACATATTTCAGCCTGAAGGGAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAACGGAATGTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTAATTGTAGCTCACTTTTAAAAAAACA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGCAAGGTATTTAATCAGAAGCGATACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGATCTTTGGTCAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTTATGAATGTGAAGAATGTGACAAAGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGAGGGAAACCATACAAATGTAAGGTTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAATTCACACTGGAGAGAAACCTTACAAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCCATCGTAGGCTTCATACTGGAGAGAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAAGAGGATTCATA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATATAATTCATACCTGGCAAAACATAGT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAACTCTTGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACGCCATCATAGACTTCATACTGCAGAGAAACCATACAAATGTGAAGAATGTGACAAAGTTTTCAGGTGCAAAT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CACACCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CGGAGTGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CAAGGTTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATGTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAGAATGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAACCG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAGGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTATAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CATCATAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCACA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCTTGCACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTGAAAGTGTAATGAGTGTGGCAAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTAAAAGTGTAATGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GTGTGGCAACACCTTCCATCACAATTCAACCCTTGTAAGTCACAAAGCCATTCATACTGGAGAGAAACTTTACA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGTGTAATGAATGTGGCAAGGTTTTTAATCAAAAAACAACCCTTGCACGTCATCATAGAATTCATACTGCAGAG  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAACTTTACAAATAGGAAGAATGTGACAAAGTTTTCGGTTGCAAATCAAACCTTGAAACACATAAGAAAATGCA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TGCTGAAGAGAAACCACACAGATGTAAGGTTTATGACAAGATTTTTGAATATAATTCATACCTGGCAAAACATA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTAGAATTCAAACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAACACCTTTGGTCAAAATTCATACCTT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTAATTCAAAAGGCAATTCGTATTGGAGAGAAACCCTACAAGTGTAATGAATGTGGCATAGTTTTTAATCAACA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GTCACACCTTGCAAGTCATCATAGTCTTCATACTGCAGAGAAATCTTACAAATGTGAAGACTGTGACAAAGTTG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TCAGTCACAAATCACAGCTTGAAAGACAGGAGAATTCATACTGGAGAAAAAACATACAAATGTAAGGTTTGTAA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CAAGGCTTTTGGGAGTGATTCACACCTGGCACACCATACTAGAATTCACACTGGAGAGAAACCTTACAAGTGCA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  ATGAGTGTGGCAAAGCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCAATCCATAGTATAGGGAAACTT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GACTAATATAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCAAATCATTGGAGAATCCATAATGA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GAGATCTTACAAGTGTAATAAATGTGACAGATTTTTCAGATATCGTTCATATATTGCTATTCATCATCGAACTC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  ATGCTGGAGAGAAACCTTATAAATGTCATGATTGTGGCAAGGTCTTCAGTCAAGTTTCATCCTATGCAAAACAT  3700

Query    1  ------------------------------------ATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTC  38
                                                ||||||||||||||||.|||||||||||||||||||||
Sbjct 3701  AGGAGGATTCATACAGGAGAGAAACTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCACACCTC  3774

Query   39  GTTGGACATCAGAGAATCCATACTGGACAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAG  112
            ..|.|||||||||||||||||.|||||||||||||||.||||||||||||||||||.|||||||||||||||||
Sbjct 3775  AATAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGTAAGGTCTTCAGTCCGAG  3848

Query  113  GTCACTCCTTGCAGAACATGAGAAAATTCATTTTTGAGATAACTGTTCCCAATGCAGTGAGTATAGCAAACCAT  186
            .||||||||||||||.|||.|||.|||||.||||.||||.|..||||.|.|||||..|.||||||||||.||||
Sbjct 3849  ATCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCCATTAGTATAGCAAGCCAT  3922

Query  187  CAAGCATTAATTGACATTGGAGTCAATTCAGCA----------------TTGACT-------------------  225
            ||||||||||||||||||..|||.||.|.||||                ||||||                   
Sbjct 3923  CAAGCATTAATTGACATTACAGTTAAATGAGCACTGACCTGAGTTTGAGTTGACTTAACATTGAGTTTAAGCAT  3996

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3997  TAATTGACATTAAACTGTTTATGTTAAGAGGACTGGGCTGGGCACTGTGGCTCACGCCTGCAATGCCAGCACTT  4070

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4071  TGAGAGGCCAAGACTGGTAGGTCACTGGAGGTTAAGAGTTTGAGAACAGCCTGGCCAACAGACGGGAGCCACTT  4144

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4145  TTCCCAGCCTGTGTTTTCATTTCTATTCTTTCTTTCTTTTTTCTTTTTTTTGTTTTTGTTTTTGAGATGGAGTC  4218

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4219  TCTTGCTCTGTCATCCAGGTTGGAGTGCAGTGGCATGATCTTGACTCACTACAACCTCCGCCTCCCAGGTTCAA  4292

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4293  GCGATCCTCCTGCCTCAGTCTCCTGACTAGCTGGGACTACAGGTGCATGCCACCACACCTGGATAATTTTTTGT  4366

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4367  ATTTTTAGTAGAGACTGGGTTTCGCTGTGTTAGCCTGGATGGTCTCGATTTTCTGATCTTATGATTCACCCACC  4440

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4441  TCTACCTCCCGAAGTGCTGAGATTATGGGCGTGAGCCACCGTGACTGGCCTGTTTTTTGTTTCTTTAACAAAAA  4514

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4515  GTTATGGGGATTTCTATGAGTATTGTGTTGAATCTAAATCACATTCGGTTATATAATCATTGAGCAATACTAAT  4588

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4589  TTTTCCAATCAGTATGGATTGTATGTGTATTTATATGTTTTTAATCATTTTGATCAATGTTTGTAGATTTCAAG  4662

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4663  GTACAAACTTCTCACCTTTATATGTTTATTCCTAAATATTTCTTACTTTAAGCTCTTTAGCAAATGGAAGTGGT  4736

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4737  TTTTAATTTTATTTTAAAATTATTTAATGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTATTATTCTATT  4810

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 4811  CTGCAAATACACTGAATATGTTTATTAGTTCCAGTTGTATTTTGGTTGACTGTGATTTTCTTCACAGATCATGT  4884

Query  226  ---------------------------------------  225
                                                   
Sbjct 4885  CATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGA  4923

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