Nucleotide Global Alignment

Description

Query:
TRCN0000473343
Subject:
XR_001753716.2
Aligned Length:
3789
Identities:
192
Gaps:
3568

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGACCAGGAAGCGGATCCCGTGGAGTGAAGGTCGCACCGCGGCGGATTGACTTCTAAAGACTTGGTACGTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAAAAAACACGGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCTTCAGGGTCTACTGACATTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAAGCACTCATGACAAAAACCAAAAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGTCACAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATACT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTCATCATAGACTTCATACTGGAAAGAAATCTTAGAAGTGTAAATTTGCAAGGTTTTTAGGCAACAGTCAAACC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTGCATGTCATCATAGACTTTATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAAGTTTTCAATTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAAATCACTCCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATTTCGGGTGTGATTCACACCTGGCCCAACATACTGGAATTCACACTGGAAAGGAACTGTACAAGTGTAATGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGTGGCAGAGCCTTTGGTGGTCAGTCAACACTTACTCACCATCAAGCAATCCATGGTATAGGGAAACTTGACTA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ATGTAATGATTGTCACAAAGTCTTCAGTAATATTACAGCCATTGCAAAACATTGGAGAATCCATAATGAAGGAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GTCTTACAAGTGTAATAAATGTGGCAAGTTTTTCAGACATCATTCATAACTTGCAGTTCATTGGCGATCTTATA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CAGGAGAGAAATCTTACAAATGTGATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTTTTGCAAAACGGGAG  2072

Query    1  --------------------------------ATGATTGTG-GCAAAGCCTTTACTTCACATTCACACCTCGTT  41
                                            ||||||||| ||||||||||||||||||.||||||||.|.||
Sbjct 2073  AATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGAGCAAAGCCTTTACTTCACGTTCACACCACATT  2146

Query   42  GGACATCAGAGAATCCATACTGGACAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTC  115
            .||.|||||||.||||||||||||||||||||||.||||.|||.|..||||||||||||||||||||||||||.
Sbjct 2147  AGATATCAGAGGATCCATACTGGACAGAAATCTTACAAACGTCCTATGTGTGGCAAGGTCTTCAGTCCGAGGTT  2220

Query  116  ACTCCTTGCAGAACATGAGAAAATTCATTTTTGAGATAACTGTTCCCAATGCAGTGAGTATAGCAAACCATCAA  189
            |||||||||||||.||.|.||..||||||||||||.|||..|||.|.|||||.|||||.|.|||||||||||||
Sbjct 2221  ACTCCTTGCAGAATATCATAACGTTCATTTTTGAGGTAATAGTTACAAATGCGGTGAGCACAGCAAACCATCAA  2294

Query  190  GCATTAATTGACATTGGAGTCAATTCAGCATTGACT--------------------------------------  225
            |    .|||||||.|.||||||||||||.|||||||                                      
Sbjct 2295  G----GATTGACAGTAGAGTCAATTCAGAATTGACTTGAGTTTGAGTTGACTTAAAACATTCAGTTGAAGCATT  2364

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2365  AATTGACATTAAAGTGTTTATGTTAAGAGGATTGGGCCAGGCGTGTGGCTCACGCCTGTAAATCCAGCACTTTA  2438

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2439  GGAGCCCAAGGTGGATAGATCACTTGAGGTCATGAGTTTGAGATCAGCCTGGCCAACAGACGATTGATTTCCAA  2512

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2513  AGACTCATGCTATGTAAGGAAGCCACCAAGAAGGGCAAAGAAAAGGAGCCAGGGACGGCTCTTCCTCAGGGACA  2586

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2587  CTAGACTTTCAGGGATGTGGCTATAGATTTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGCTT  2660

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2661  TATACAGGGAAGTGATGTTGGAGAACTACAGGAACCTGGAGTTTGTGGGCTTGAGTGCAAGCCACGATCTCGCC  2734

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2735  TCACCACAACCTCCGTCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGTA  2808

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2809  TGAACCACTATGCCCGGCTAACTTTGTTTTTTTTTTTTAGAAATTAAACCTTTTTTCAGCTTAATGACCCAGGG  2882

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2883  GTGTATTTTTGAAGGACTTGGGAGCTCTCTTTGAAAGGCAAACAACAAGGGAAACAGTACCTTTATCTCAGTAG  2956

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2957  GAAATTAAATAATTCAAACATCAAATAACTTCAATTTAAGGCTATGGACTTTGAGATAATTCTGAGCCTTGAGA  3030

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3031  GGAATGTGGTCAGGCAACCTGAGTCCAGTGGAATGCAGGTGCAACTTCTAAGAGTTTTCCTGTAAGTAATTAAG  3104

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3105  AAGACTAAGTAGCCCCAGAGATAAGACCTCCTCGGATCATTGTCCCTTCTTATGTAGTGATAAAGTAACCTTCC  3178

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3179  TTGAAGTGTATCTATCCGTAATCAATCAAGTTGCTGCAGCCTATGCACTGGCCCAGAATAAAAAACGTGGTGAT  3252

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3253  TCTGCTAAAGCTTCTCTGTCTTTCCCTGTGTGTGAAATCTTAACGTCTCTACTTGGGAACGCTGATCCCATTCA  3326

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3327  TTTAGAGTTGATGTTTCCACGTGGCTATTTCCAAGCTTTGCCTTCAAATAAATTCTGTACTTAATCATATATTC  3400

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3401  TAAATTTTATTATTTACTGCTGACATCAGTTTCTGTCGGATTGTAGGAGCCTCACCAGAGAGGGCCCCTGTCGC  3474

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3475  CATGTTGTAAAACTCACACTTGCCAAAAGTTGTGGGTTAGGGTTTCTCCCCCTCCCTCAGGATGACGCTAGTTA  3548

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3549  GCTGACACAGATGGTCACCTCCATTACCAAGTAGAGTCAGGATGAACTATGTGTGACTGTTCAACTATGTGTCC  3622

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3623  TCTTCCCTGAGGACTGATTAGTGTTTATCTTGAAAACATGTCCTTAATGGGTTGTATAGAACACTGAAGCATCT  3696

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 3697  GATTTCAAACTCTTAGCTCTTTTCCTCTATTTCCCATCACATTCTGGTCTAAGGCTTATTTATTAATAAAATGA  3770

Query  226  ---------------  225
                           
Sbjct 3771  TTTTTATTTCTTTAT  3785

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