Nucleotide Global Alignment

Description

Query:
TRCN0000473343
Subject:
XR_002958276.1
Aligned Length:
2581
Identities:
201
Gaps:
2356

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGAGTTTCGCTCTGTTTTATGTGTGCTTCCCAGTCCTGTGGTGCTGCTATACCGGGGACGTTGAGTCCCCACAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCTGGAAATTGCGGCCCCTCTTTCTCAACCCAGAGCAAATTGAGACGTCCGGGTGAGAGTCCAGTCTCACTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTCCTTCAGGCTGTGAGTGCAGTCTCCTGATCTTGGCTCACTGCAACCTCTGTCTCCTGGGTTCAAGTGATTCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGTGCCTCAGCCTACCAAGTAGCTGAGATACAGGATTGACTTCTAAAGACTCTTGGTACCTGAGGAAGAAACCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGAAGAGGAAGAGGAAAGCAAAGGAGTCGGGGATGGCTCTTTCTCAGGGTCTACTGACATTCAGGGATGTGGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAATTATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATGATGAATACATTGTCATCAACAGGGCAAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCAATACAGAAGTGATCCACACAGGGACATTGCAGAGACAAGCAAGTTATCACATTGGAGCATTTTGCTCCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAAATTGAGAAAGACATTCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAACAAATGACCATGAAGCACCCAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GACAGAAATAAAAAAGTTGACTAGTAGTACAGACCGATATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTCAGCTTGAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGTGAAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAATACATAGGATAATTCATACTGGAGAGAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCATACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCACACCTGGCAAAACATACTAGAATTCACA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGGGAGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGATCAAAAAGCAACCCTTGCATGTCATCAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGAAGTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGACATCACACCTTGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTACCATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGACCTTCGCTCGAAATT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CAGTCCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTATAAGTGTAATGAATGTGGCAAGGTTTTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAGCAACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAGAGAAACCTTACAGATGTGAAGAATGCGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGTTTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAGAACATCAGAGAGTTCATACTGGAGAGAGACCT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TACACATGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCGTACCTCGCATGTCATCAAAAACTTCATACTGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGAGAAACTTTACGAATGTGAAGAATGTGACAAAGTTTACATTCGCAAATCACACCTTGAAAGACATAGGAGGA  1628

Query    1  ------------------------------ATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTCGTTGGA  44
                                          .|||||||||.||||||||||.|||||.|||||||||..||.|.
Sbjct 1629  TTCATACAGGAGAGAAACCTCACAAGTGTGGTGATTGTGGTAAAGCCTTTAATTCACCTTCACACCTTATTAGG  1702

Query   45  CATCAGAGAATCCATACTGGACAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTCACT  118
            |||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||.||||.|||||||||
Sbjct 1703  CATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTTTAGTCTGAGGTCACT  1776

Query  119  CCTTGCAGAACATGAGAAAATTCATTTTTGAGATAACTGTTCCCAATGCAGTGAGTATAGCAAACCATCAAGCA  192
            |||||||||||||.|||||||||.||||.||||.||.||||.|.|.||||.|||||||||||||||||||||||
Sbjct 1777  CCTTGCAGAACATCAGAAAATTCCTTTTGGAGACAATTGTTTCAAGTGCAATGAGTATAGCAAACCATCAAGCA  1850

Query  193  TTAATTGACATTGGAGTCAATTCAGCATTGACT-----------------------------------------  225
            |||||||||||..|||||||.|||||||||||.                                         
Sbjct 1851  TTAATTGACATCAGAGTCAAATCAGCATTGACCTGAGTTTGAGTTGACTTAACATTGATTTCAAGCATTAATCG  1924

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1925  ACATTAAACTGTTTATGTTAAGAGGATTGGGCCAGGCGTGGTGTCTCACACCTGTAATCCCAGCACTTTGAGAG  1998

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1999  GCCAAGACAGATGGAATCTTGCTCTGTCGCCCACGTTGGAGTGCAGTGATGTGATCTCGGTTCACTGCAACATT  2072

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2073  CACCTCCCAGGTTCATGCAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGATTGATTTCCAGAGA  2146

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2147  CTTATGTTACTTGAGGAAGACACCAAGAAGGCAAAGAAAAGGAGCCAGGGATGGCTCTTCCTCAGGGATACTTG  2220

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2221  ACTTTCAGAGATGTGGCTATAGAGTTCTCTTTGCTGGAGTGGAAACGCCTGGACCCTGCACAGAACGCTTTATA  2294

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2295  CAGGGCTGTGATGTGGGAGAACTACAGGAACCTGGAGTCTGTGGGTGAGGAAAATGTTCCTCCAGACATGAAGA  2368

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2369  ATCTGTCCTTGTGTATCTTGGCTTTTCCTGGTTTTGTATTCTCTTTTGTGATTTTGCCCCATACGTGCTTTTGA  2442

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2443  TGTACACAGCTGGGATTCCAGGCACGTGCCACCATGCCCAGCATGTTATTTTGTATCTTTAGTGGAGATAGGGT  2516

Query  226  -----------------------------------------------------------------  225
                                                                             
Sbjct 2517  TTTGCCATGTTGGCCAGGCTCGTCTCGAACTCCTGACCTCCATACCCACCCGCCTCGGCCTCTAA  2581

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