Nucleotide Global Alignment

Description

Query:
TRCN0000473858
Subject:
NR_102299.2
Aligned Length:
4781
Identities:
541
Gaps:
4163

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGTGGATCCCGTGGAATGACGGTCACGCCGCGGCGGGCGGATTGACTTCTAAAGACTGTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGAAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGTCCCTCTCATCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCTTAGGTTCCGTCTCTCGTGACCCAGTGTCATGAACTTGGGAAGAGGCTGCACTGGGCAGGTCCTGGGAAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCACACCCCGACATGGATGGACACGGGGTGAGGGTCCTGTGGTGTCAGTGCTCTTGGGCAGCAGGGATTGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGGGCCACATCTGGATGCACTGTCAGCTCACTGTGGACCAGGATTGGAGCAGCTGCCAATGGGAGTCACGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTAATATGCACGAAGTACGTGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCCTGGACCCTGCTCAGAGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGTTTTGGTCTGTCATCCCGGCTAAAGTACAGTGGTGTCATCTCCGCTCACTGCAACCTCCACTTCCCAGGTTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAGCAATTCTCCTGCCTCAGCCTTCCAAGTACCTGGGACTACAGATATCTCTTCCAAATGCATGTTGAAGACGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGTCGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCACAGACAAGCAAGTCATCACATT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGAGAATTTTGTTTCCATGAAATTGAGAAAGACATTCATGGCTTCGAGTTTCAGTGGAAAGAAGATGAAACAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGCCATGCAGCACCCATGACAGAAATCAAAGAGTTGGCTGGTAGTACAGGCCAACATGATCAAAGGCATGCTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAAACAAGCGTATTAAAGATCAGCTTGGATCAAGCTTTCATTTGCATCTGCCTGAACCGCACATATTTCAGTCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGGAAGTACACATGAGAGAAAAATCTTTTGAATGTATACAGAGCTTCAAATCCTTTAATTGCAGCTCACTCTTA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAAAAACATCAGATAATTCACTTAGAAGAGAAACAATGTAAATGTGATGTATGTGGCAAGGTCTTTAATCAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCGATACCTTGCCTGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTGGTCATAATTCATCCCTCTTCATTCACAAAGCGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TAAGGTTTGTGATGAGGCTTTCGCATATAATTCATATCTGGCAAAACATACTATACTTCACACTGGAGAGAAAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTTACACATGTAATGAATGTGGCAAAGTTTTTAATCGACTATCAACCCTTGCACGCCATCATAGACTTCATACT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGAGAGAAACCTTACAAATGTGAAGAGTGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GATTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTTGCAAAGTTTTCAGTCGCAAATCAAACCTGGAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GACACAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCAGAGGGATTCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CACCTGGCACAACATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCAGACATCATCGCTTATAATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGACCTTCAGTCAGATGTCATCCCTTGTATACCATCATAGGCTTCATAGTGGAGAGAAGCCTTAATAGTGTAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GAGTGTGGCAAGACCTTCCATCACAATTCAACCCTGTAAGTCATAAGGCAATTCATACTGGAGAGAAACCTTAC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAGCATAATGAATGTGGCAAGGTTTTTAATCAAAAAGCAACCTTTGCACATCACCATAGACTTCATACTGGAGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAAACCTTACAAATGGGAGGAATGTGACAAAAGTTTTCAGTTGTAAATCAAACCTTAAAACACATAAGAAAATT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CACATTGAAGAGAAACCATACAGAGGTAAGGTTTGTGACAAGGTTTTTGCATATAATGCATATCTGGCAAAACA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TACTAGAATTCACACTGGAGAGAAACTCATTATAAGTGTAATGAGTGTGGCAAGACCGTTGGTCAAAATTCACA  2442

Query    1  ------------------------------------------------------------------ATGAATGT  8
                                                                              ||||||||
Sbjct 2443  CCTTGTAATTAAAAGGTCAAAATTCACACCTTGTAATTCATAGTGGAGAGAAACCTTACAAGCACAATGAATGT  2516

Query    9  GGCAAGGTTTTTAGTAGAAAAGCACACCTTGCATGTCATCATAGACTTCATACTG--------TCT--------  66
            |.||.||||||||.|..|.||.|||||||||||.|||||||||||||||||||||        |||        
Sbjct 2517  GACATGGTTTTTAATCAACAATCACACCTTGCAAGTCATCATAGACTTCATACTGCATAGAAATCTTACAAACG  2590

Query   67  --------------AAGGTTTCTAATCA----------------------------------------------  80
                          |||.|||| |.|||                                              
Sbjct 2591  TGAACAATGTGACAAAGTTTTC-ATTCACAAATCCAGCTTCAAATACATAGGAGAATTCACACTGGAGAAAAGC  2663

Query   81  ---------------------ACAA----------------TCAAACCTTGCACAACATCAGAGAGTTTATACT  117
                                 ||||                |||.||.|.||||..|||...|||.||.|.|||
Sbjct 2664  CATAGAAATGTAAGGTTTGTGACAAGGCTTTCGGGAATGATTCACACGTGGCACCCCATACTAGAATTCACACT  2737

Query  118  GGAGAGAAACCTTACAAGTGTAATGAGTGGGGCAAAGCCTTAAGTGGGAAGTCGTCACTTTTTTATCATCAAGC  191
            ||||||||||||||||||||.||||||||.||||||.||||.||||||.||||..|||||.||.|.||||||||
Sbjct 2738  GGAGAGAAACCTTACAAGTGCAATGAGTGTGGCAAACCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGC  2811

Query  192  AATCCATGGTGTAGGGAAACTTTGCAAATGTAATGATTGTCACAAAGTCTTCAGTAATGCTACAACCATTGCAA  265
            ||||||||||.|||||||||||..|.||||||||||||||||||||||.||||||||||||||||||||||||.
Sbjct 2812  AATCCATGGTATAGGGAAACTTGACTAATGTAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCAC  2885

Query  266  ATCACTGGAGAATCCGTAATGAAGACAGATCTTACAAGTGTAATAAATGTGGTAAAATTTTCAGACATCAATCA  339
            ||||.||||||||||..|.|||||  ||||||||||||||||||||||||||.|||.||||||||||||..|||
Sbjct 2886  ATCATTGGAGAATCCACAGTGAAG--AGATCTTACAAGTGTAATAAATGTGGCAAATTTTTCAGACATCGTTCA  2957

Query  340  TATCTTGCAGTTTATCAGCGAACTCATACTGGAGAGAAACCTTACAAATATCATGACTGTGGCAAGGTCTTCAG  413
            |..||||||.||.|...|.||||||||.||||||||||||||||.||||.||||||.||.||||||||||||||
Sbjct 2958  TGCCTTGCATTTCACTGGTGAACTCATGCTGGAGAGAAACCTTATAAATGTCATGATTGAGGCAAGGTCTTCAG  3031

Query  414  TCAAGCTTCATCCTATGCAAAACATAGGAGAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCA  487
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 3032  TCAAGCTTCATCCTATGCAAAACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCA  3105

Query  488  AAGTCTTGACTTCACGTTCACACCTCATTAGACATCAGAGAATCCATACTGGACATAAATCTTACAAATGTCTT  561
            |||..||.|||||||.|||||||||||||||||||||||||||||||.|||||||.||||||||||||||||.|
Sbjct 3106  AAGCGTTTACTTCACATTCACACCTCATTAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCAT  3179

Query  562  AAGTGTGGCAAGGTCTTCAGTCTGTGGGCACTCCATGCAGAACATCAGAAAATTCATTTT--------------  621
            .|||||||.|.|||||||||||...||.||||||.||||||.|||||||.|||||.||||              
Sbjct 3180  CAGTGTGGAAGGGTCTTCAGTCCAAGGTCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTT  3253

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3254  CAAATGCAGTGAGTATAGCAAACCATCAAGCATTAATTGACATTAGAGTCAAATCAGCCTTGACCTGAGTTTGT  3327

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3328  TGATTTAACATTGATTTCAAGCATTAATTGCCATTAAACTGTTTATGTTAAGAGGATTGCACTGGGGGCCATGG  3401

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3402  CTCATGCCTGTAATTCCAGCACTTTGAGAGGCAAAGACAGGTAGGTCACTGGAGCTCACGAGTTTGAGAACAGC  3475

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3476  CTAGCCAACAGATGGGAGCTACTTTTCCCAGCCTTTATTTTCTTTTTCTTGTTTTTTTTTTGAGATGGAGTCTT  3549

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3550  GCTCTGTCGCCCAGGTTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCTCCTCCCAGGTTCAAGCAA  3623

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3624  TTCTCCTGCCTCAGTCTCCCAAGTAGCTGACACTACAGTTGTGTGCCACCACACCTGGGTAATTTTTTGTGTTT  3697

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3698  TTAGTAGAGACTGGGTTTCACCGTGTTAGCCAGAATGGTCTCTATCTTCTGACTTTATGATCCACCCGACTCCA  3771

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3772  CCTCCCAAAGTGCTGAGATTACAGGAGTGAGCCACTGTGCCTGGCCTGTTTTTTGTTTCTTTAACAAAAAGTTA  3845

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3846  TAGAGACTTCTATGAGTATTGTACCGAATCTAAATCACAATTGAGTATATAATCATTGAGCGATATTCATTTTT  3919

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3920  CCAATCAGTATGGGATTTATATCTATTTATACATGTTTTTAATCATTTTGATCAATGTTTATAGATTTCAAGGT  3993

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3994  ACAAACCTCACTTTTTATGTTTATTCCTAAATATTTCTTACTTTAAGTTCTTTAGCAAATGGAATTGGTTTTTA  4067

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4068  ATTTTCTTTTAAAATTATTTATTGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTGTTATTCTATTCTGCA  4141

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4142  AATAAACTGAATGTGTTTGTTAGTTCCAGTTGCATTTTGGCTGACTCTTTGTGATTTTCTTTACAGAAGGTCAT  4215

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4216  GTCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGATTTGGATGAGTTTGATTTCTTTTGCTATTTCAT  4289

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4290  TGTTCTGGCTAGGACAGCCAGTATTGATTGAATAGAAGGGGTGAGAGCATTCTTGCATCATGTGAGATCCTACA  4363

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4364  GGAAAAGCATTCCGTTTTCCCTGATTGGTTATTTCTGCTGTGGTCATTTCATGGATGGTCTTTGTATTGCTGAG  4437

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4438  GTAAATTTTCTTCTGTATCTATTTTGTGTGGGATTTCTATGATGACTTGATGTTGACTTTTGTGAAATGCTTTT  4511

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4512  TCTCCATGTATTGAGATGATGTGGTTTTCATCTTTCATTGTGTTCAAGTGGTATATCACATTGATTTGCTTGAC  4585

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4586  TATGTTGAACCATCCTTGCATCCCAGAAATAAGTGGCACTTGCATATCTACAATCCTTTTAATATCCTCTTGAA  4659

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4660  TACAGTTCGCTAGTACAAGGGGTCTTCAAGAAGTTCATGAAAAAAATACATATTATGTGAAAATTGCACATGAT  4733

Query  622  ---------------------------------------------  621
                                                         
Sbjct 4734  GTCACATTTTCTGCACCAAAATAAACTGGCACAAATCTGTTATAA  4778

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