Nucleotide Global Alignment

Description

Query:
TRCN0000473858
Subject:
NR_145445.2
Aligned Length:
5223
Identities:
545
Gaps:
4605

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACGCGCGCAAACCCGGAAGCAGATCGCGTGGAGTGAAGGTCCCTCAGCGGCGCGATTGACATCTAAAGACTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTGGTACATGAGGAAGAAACCCGGAAAAGGAAAGCAGAGGAGTCAGGGATGGCTCTTCCTCAGGGTCTATTGAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGGTATCTCTTCCAAATGCACAATGAAGGAGTTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCATCAACAGCACAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAACGTCATCACATTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGATTTTTCCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGATGAAAGAAATG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCCATGAAGCACCCATGACAAAAATCAAAAAATTGATGGGTAGTACAGAGCAATATGATCACAGGCATGCTGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AACAAGCCTATTAAATATCAGCTTGGATCAAGCTTTCATTCACATCTGTCTGAACTCCACATATTTCAGCCCAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGGGAAAATTAATAATCAAGTGGAGAAGTCTATCAACGATGCTTCCTCGGTTTCAACAGCCCAAAGAATTTCTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTAGGCCCAAAACCCATATATCTAATAACTATGGGGATAATTTTCTGAATTATTCATTACTCACACAAAGACAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAAGTACGCATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAAGCCTTTAATTATAGCTCACTCTTAAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAAACATCAGATTATTCATCTAGGAGAGAAACAATATAAATGTGATGTATGTGACAAGGTCTTTATTCGGAAGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GATACCTTGCACGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGTCCTTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGTCAGATGTCATCCCTTACATATCATCATCGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAAAGCTTTCAGACACAATTCAGCCCTTCAAAGACATAGGAGAATTCATACTGGAGAGAAACCACATAAGTGTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATGAGTGTGGCAAGACCTTTAGTCAGAAGTCATACCTTGCATGCCATCGTAGCATTCATACTGGAAAGAAACCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TACGAATGTGAAGAATGTGACAAAGCTTTCAGTTTCAAATCAAACCTTGAAAGTCATAGGATAACTCATACTGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGAGAAACCATACAAGTGTAATGATTGTGGCAAGACCTTCAGTCATATGTCAACCCTTACATGCCATCGTAGAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGATGAAGCTTTCCGTTTCAAATCAAGTCTTGAAAGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CATAGGAGAATTCATAATGGAGAGAAACTGTACAAATGTAATGAGTGTGGCAAGACCTTCAGTCAGGAGTTATC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCTTACCTGCCATTGTAGACTTCATAGTGGAGAGAAACCTTGCAAGTGTGGAGAATGTGACAAGGCTTACAGTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCAAATAAAATCTTGAAATACGTCAGAAAATTCATACTGGAGAGAAATGTTATAAGTGTAATGATTGTGGCAAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATCTTCAGTCATACGTCATCCATTGTATACCATCATAAATTTCATAGTGGAGAGAAACCTTACAAATGTGAAGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATGTGATGAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATAGGAGAATTCACACTGGTGAGAAACCTTACA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGTGTAATAGGTGTGGCAAGACCTTCAGTCATACATCATCCCTTACATGCCATCATAGACTTCATACTGGAGAG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AAACCTTACAAATGTGAAGAATGTGATGAAACTTTCAGATACAAATCAAATCTTGAAAGACATAGGAGAATTCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TAATGGAGAGAAACCGTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGAAGTCATGCCTTACACGCCATC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATAGACTTCATACTGGAAATAAATCTTATAAGTGTAATGAGTGTGGCAAGACCTTCAGTAAGGAGTTAACACAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCCATCATAGACGTCATACTGGAGAGAAACCTTAGAAGTGCAATGAGTGTGGCAAAACCTTTCATAGGCAGTCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCGCTTATTTACCATCAAGCAATCCATGGCAGAGGGAAACTTTACAAATGTAATGATTGTCACCACGTCTTCAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TAATGCTACAACTATTGCAAATCATTGGAGAATCCATAATAAAGAGAGACCTTACAAGTGTGATAAATGTGACA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AATTTTTCAGACATCGTTCATACCTTGCAGTTCACGGGCGAACTCATGCTGGAGAGAAACCTTACAAATGTGAA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAATGTGATAAAGCTTTCAGATTCAAATCAAACCTTGAAAGTCATAGGAGAATTCATACTAGAGAGAAACCTTA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAAGTGTAATGAGTGTGGTAAGATGTTCAGTCAAAATTCGGCCCTTGTAATTCATAAGGCAATTCATACTGGAG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGCAAAGCAAAGCTTGCATGTCATCATAGACTT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CATACTGGAGAGAACGCTTGCAAGTGTAATAAATGTGGCGAGGTTTTTAATCAACAAGCACACCTTGCACGTCA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCATAGAACTCATACTGGAGAGAAACATTACAAGTGTAATGAGTGTGGCAAGACCTACTCTCACAATTCAGTCC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TTGTAATTCATAAGACAATTCACACTGGGGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAACCTTCCATCAC  2812

Query    1  -----------------------------------------------------ATGAATGTGGCAAGGTTTTTA  21
                                                                 |||||||||||.|||||||.|
Sbjct 2813  AATTCAGTCCTTGTAATTCATAAAACAATTCATACTGGAGAGAAACAAGCGTAATGAATGTGGCGAGGTTTTCA  2886

Query   22  GTAGAAAAGCACACCTTGCATGTCATCATAGACTTCATACTG--------TCT---------------------  66
            .|..|.||||||||.|||||.|||||||||||.|||||||||        .||                     
Sbjct 2887  ATCAACAAGCACACGTTGCACGTCATCATAGAATTCATACTGGAGAGAAACCTTAGAAATGTGAAGAATGTGAC  2960

Query   67  AAGGTTT-------CTAATCA-----------------------------------------------------  80
            ||.||||       |.|||||                                                     
Sbjct 2961  AAAGTTTACAGTCGCAAATCAAACCTCGAAAGACAGGAGAATTCATACTGGAGAGAAACCATAAAAATGTAAGA  3034

Query   81  -------ACAA----------------TCAAACCTTGCACAACATCAGAGAGTTTATACTGGAGAGAAACCTTA  131
                   ||||                |||.||||.||||||||||..||||||.|.|||||||||||||||||
Sbjct 3035  GTTTTTGACAAGGCTTTCGGACGTGATTCACACCTGGCACAACATCCCAGAGTTCACACTGGAGAGAAACCTTA  3108

Query  132  CAAGTGTAATGAGTGGGGCAAAGCCTTAAGTGGGAAGTCGTCACTTTTTTATCATCAAGCAATCCATGGTGTAG  205
            |||||||||||||||.|.|||||||||.||||||.||||..|||||.||.|.|||||.|||||||.|.||||||
Sbjct 3109  CAAGTGTAATGAGTGTGTCAAAGCCTTTAGTGGGCAGTCAACACTTATTCACCATCAGGCAATCCGTAGTGTAG  3182

Query  206  GGAAACTTTGCAAATGTAATGATTGTCACAAAGTCTTCAGTAATGCTACAACCATTGCAAATCACTGGAGAATC  279
            ||||||||..|.||.|||||||||.||||||.|||||||||||||||||||||||||.||||||||||||||.|
Sbjct 3183  GGAAACTTGACTAACGTAATGATTCTCACAACGTCTTCAGTAATGCTACAACCATTGTAAATCACTGGAGAAGC  3256

Query  280  CGTAATGAAGACAGATCTTACAAGTGTAATAAATGTGGTAAAATTTTCAGACATCAATCATATCTTGCAGTTTA  353
            |.|||||||||.|||||||||||.||||||||.|||||.|||.||||||||||||..|||||..||||.|||.|
Sbjct 3257  CATAATGAAGAGAGATCTTACAAATGTAATAATTGTGGCAAATTTTTCAGACATCGTTCATACATTGCCGTTCA  3330

Query  354  TCAGCGAACTCATACTGGAGAGAAACCTTACAAATATCATGACTGTGGCAAGGTCTTCAGTCAAGCTTCATCCT  427
            |..||||||||||.|||||||||||.||||| |||.||||||.|||||||||||||||||||||||||||||.|
Sbjct 3331  TTGGCGAACTCATGCTGGAGAGAAATCTTAC-AATGTCATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTT  3403

Query  428  ATGCAAAACATAGGAGAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAAAGTCTTGACTTCA  501
            .||||||||  ||||||||||||||||||||||||||||||||||||||||||.|||||||||.|||.||||||
Sbjct 3404  TTGCAAAAC--AGGAGAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATCGTGGCAAAGCCTTTACTTCA  3475

Query  502  CGTTCACACCTCATTAGACATCAGAGAATCCATACTGGACATAAATCTTACAAATGTCTTAAGTGTGGCAAGGT  575
            |.|||.|||||||||||||||||||||||||||||||||||.||||||||||||||||.|.|||||||||||||
Sbjct 3476  CATTCTCACCTCATTAGACATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGT  3549

Query  576  CTTCAGTCTGTGGGCACTCCATGCAGAACATCAGAAAATTCATTTT----------------------------  621
            ||||||||.|....||||||.|||||||.|||||||||||||||||                            
Sbjct 3550  CTTCAGTCCGACTTCACTCCTTGCAGAATATCAGAAAATTCATTTTTCAGGATTTCTATGATGACTGGATTTTG  3623

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3624  AATTTTGTGGAACGCTTTTTCTCCATCTACTAAGGTGATGTGGTTTTAATCTTTCATTCTGTTCTAGTGGTATA  3697

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3698  TAACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTGGCACTTGAATATCTACATTT  3771

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3772  TTTTAATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAAAAATACATATTATGA  3845

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3846  GAAAATTGTGCATGAATTTCACAATTTTTGCACCAAAATAAACTAGTGCTAGTCTGTTATAACATGTCTGAACA  3919

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3920  GGCTCTAGTTTGATGCCCTCAAAAGGATAAGACATGAGTATAAAAAGAGACTCCATCAAAGCAATATAAATTCT  3993

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 3994  GATGAAATTTAAACAAGAAGAAACATTAAATTTATGATGAGACCAGATGCAGTGGCTCAGGCCTGTAATCCCAG  4067

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4068  CATTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACCAGCCTGGGAAACGTGGGGAAAT  4141

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4142  CCCCTTTTCTACAAAAAATACAAAAATTAGCTGGGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGT  4215

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4216  CTGTGCAGGGAGGATGGCATGAACCTGGGAGGTCAAGATTGCAGTGAGCTATGATCATGCCACTGCACTCCAGC  4289

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4290  ATGGGTGATGGAGAGAGATACTGTCTTAAAAAAAGAATACTTGTGGTAACGTTTGGGTAGAGGAATAATGAAAT  4363

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4364  CATTGATGCTTTATAAAAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACTTATT  4437

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4438  TTGAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCACATCATTTTTACAGAA  4511

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4512  AAAAAAATTAATCTTGTTCATGCTGCAATGAAGAGGACTGACAGCAAACAGCAGAAACATAGTCAGAATTTAGA  4585

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4586  GAACAGCCTGGTTAACATGGTGAAACACCATCTCTAGTAAAAATACAAAAATTAGCTCAGCATGGTGGCATGCG  4659

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4660  CCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCTCTTGAACCCAGGAGGTGGAGGATGCAGTGAAC  4733

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4734  TGAGATGGCAACATTACACTCTAGCCTGAGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAATTGTCAAG  4807

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4808  TTCCTTCTCTTCCATTCTTTGCCATCGTGGTGTGTGCTTGACTCTGCTTCTTGCCACATCTTCTCAGAAGACTT  4881

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4882  TCAGGATTAAGCGATTCCTGGCCAAGAAACAAAAGCAAAACCATCCCACTCCCCTGTGGATTCAGATCAAAACT  4955

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 4956  GGTAATAAAATCAGGTACGACTCCAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTATAAGGAATTGCATG  5029

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 5030  TGAGATGGCACACATATTTATGCTGTCTGAGCATCACAATCACGTTACCATATCAAGCTGAAAATGTCACCACT  5103

Query  622  --------------------------------------------------------------------------  621
                                                                                      
Sbjct 5104  ATCTGGACAGTTGGACATGTTTTATTGGGAATATGTTTTTTCTCTGTAAATTTGTTATAAACGCATTGGTTGGC  5177

Query  622  -------------------------------------------  621
                                                       
Sbjct 5178  TGTGTTCAGTAATAAACGTGAGACTTTTCATTTCAAAACAAAA  5220

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