Nucleotide Global Alignment

Description

Query:
TRCN0000473968
Subject:
XM_011510223.2
Aligned Length:
3183
Identities:
164
Gaps:
2997

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGGTCAGAGCTTCATTACAGAAGGTTAGTGGATCATCTGATTCTGTGGCTACAATGAACAGTGAAGAATT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGTTTTGGTTCCTCAGTATGCAGATGATAATTCTACAAAACATGAAGAAAAACCTCAACTGAAGATAGTTTCTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGATTTTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCAGCCAAACAAATAAGCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACCATCTTCTCCAGGTGGACTAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTACTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTAGAGGCTTTACGGGCAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAATGTTCCAGAAGGTTCTGTGAGAATTATAGACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGGTGTTATTCTGTGCACGTGGACATGACGGAACAACAGAGAGCAATTGCTTTGCATTTACAGAGAGTTCCCAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTGAAATTAAAGAGGCAGTAAGCAGAATTTTGTACAGTTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATGTGTTTACCTTCAGTGTCTCCTTGGAGGTAAAAGAAGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GATAGAGATAAATTTTATTTCAAATTAAAGCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TAACAAAGAATTAGCTATTGAAAGATGTTTTGGAATGTTATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGCATTTACTGGATATGGAATCCATGGGAAAGAGCTATGATGGGAGAGCTTATGTCATCACTGGCATGTGGAAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTATACATGACTGTGGCAGT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGCTTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATGAGCGATTTTGGTATTTCAGCAGAAAGACTTTCACAGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAAGGCCATACCAATGCTGGAGATGCAATATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCCCAGGATGATGAAGCAGAAGAGGAGAGTGATAATGAAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCCTGAGAAGATCCTGTATTCTTGGGGAGAGTTGCTAGGA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAATGGCACAGTAACCTTGGTGCACGACCGAAAGGGCTGTCTACTCTGGTGAAGAGTGGTGTCCCTGAAGCATT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAGGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGATAGATACCGAATTCTTA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCACAAAGGACTCAGCCCAGGAGAGTGTTATTACTCGAGATATTCATCGTACATTTCCCGCACATGATTACTTT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAAGATACTGGAGGAGATGGTCAAGAATCGCTCTATAAGATCTGCAAGGCCTACTCTGTGTATGATGAAGACAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGGGTACTGTCAAGGGCAGTCTTTTCTTGCTGCTGTATTACTGCTGCATATGCCAGAGGAACAAGCATTCTGTG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTTTGGTGAAAATCATGTACGACTATGGTTTGAGAGACCTCTACAGAAACAACTTCGAAGATCTTCATTGCAAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTCTACCAGTTGGAGAGACTAATGCAGGAACAGCTACCGGACCTGCATAGCCATTTTTCTGATCTGAACCTGGA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGCTCATATGTATGCATCCCAGTGGTTTCTCACTCTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTCCACA  2146

Query    1  ------------------ATGA----TAGAAGA-AATC-TCCATTATGGTAGCCT-----------ATGAC---  36
                              .|||    |.|||.| |||| |.|||    |||||.|           |.|||   
Sbjct 2147  TCATTGACTTACTGCTTTGTGAGGGTTTGAACATAATCTTTCAT----GTAGCTTTGGCTCTCCTAAAGACCTC  2216

Query   37  -------------------GCCCATGTT-------------------------TTCAGC-------CAGCTGCA  59
                               ||..||.||                         ||||||       .||.|.||
Sbjct 2217  AAAGGAAGACCTTCTGCAGGCTGATTTTGAAGGTGCTTTAAAGTTCTTTAGAGTTCAGCTTCCAAAGAGATACA  2290

Query   60  CG----------ATG-AAGACTTCCTCACTAGTCTGGTGGCCATCAGCAAGC---CCAGGTCTATGGTACCAAC  119
            .|          ||| ||||          ||.|||.|||     ||||.||   |.|..| ||..||||||||
Sbjct 2291  GGGCAGAGGAAAATGCAAGA----------AGACTGATGG-----AGCAGGCTTGCAATAT-TAAAGTACCAAC  2348

Query  120  CAAGAAGCTGAAGAAATATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGG  193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2349  CAAGAAGCTGAAGAAATATGAGAAAGAATATCAGACAATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGG  2422

Query  194  ATAGATACAAGTTTGTATATTTG---------------------------------------------------  216
            |||||||||||          .|                                                   
Sbjct 2423  ATAGATACAAG----------AGGGAGAACCGAAGATTACAGGAGGCCAGCATGAGGTTGGAACAAGAGAATGA  2486

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2487  TGACCTTGCCCATGAACTAGTAACAAGCAAAATTGCTCTACGGAATGACTTGGATCAGGCAGAAGACAAGGCAG  2560

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2561  ATGTGTTGAATAAAGAGCTCCTTTTGACCAAACAGAGGCTGGTGGAGACTGAAGAGGAGAAGAGGAAGCAAGAG  2634

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2635  GAAGAGACTGCCCAGCTAAAAGAAGTCTTCAGGAAACAGCTAGAGAAGGCAGAATATGAAATAAAGAAGACTAC  2708

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2709  AGCTATCATTGCTGAGTATAAACAGATCTGTTCGCAGTTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCA  2782

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2783  AGGAGGAGCTGGAAGTGGTAAAGGGTAAGATGATGGCATGCAAACACTGCAGTGACATTTTCAGCAAGGAGGGT  2856

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2857  GCTTTGAAACTAGCAGCCACAGGCAGAGAGGACCAGGGAATTGAAACAGATGATGAGAAGGACTCACTTAAGAA  2930

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2931  GCAGCTGAGAGAGATGGAACTGGAACTGGCACAAACCAAACTGCAGTTGGTGGAGGCCAAGTGTAAAATTCAGG  3004

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 3005  AACTTGAACATCAGAGAGGAGCCCTTATGAATGAAATCCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTG  3078

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 3079  AACTCTATCAAAACGGCCACGGGCACCCAGCCATTGCAGCCAGCACCGGTCACCCAGCCACCCAAGGAGAGCAC  3152

Query  217  -  216
             
Sbjct 3153  A  3153

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