Nucleotide Global Alignment

Description

Query:
TRCN0000474219
Subject:
XM_006522527.3
Aligned Length:
2422
Identities:
1786
Gaps:
377

Alignment

Query    1  ATGGCGGCCGCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAGGTAACCT  74
            ||||||||||||||||||||.|||||||.|||||||||.||||||||||||.|.||.|||||.||.||.|||||
Sbjct    1  ATGGCGGCCGCGGGCTTGGTGGCTGTGGTAGCGGCTGCGGAGTACTCTGGCCCTGTGGCGTCCGGGGGAAACCT  74

Query   75  CCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGCCCGGGCTCGTGGAGCCGCTCTCTCG  148
            |.|.||||....|||.||.||.|||.|.|||...|||||||||..||||||||||||.|||||||||||..|||
Sbjct   75  CTCCGGTGCGACCTGTGGGCCGAGCCCTGGGTTGGGCCCTGGTCCTGGCCCGGGCTCTTGGAGCCGCTCGGTCG  148

Query  149  ATCGAGCCCTGGAGGAGGCGGCGGTCACTGGGGTGCTGAGCCTGAGCGGCCGGAAACTGAGGGAGTTTCCCCGG  222
            |.|||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACCGAGCCCTGGAAGAGGCGGCGGTCACCGGGGTGCTGAGCCTGAGCGGCCGGAAACTGAGGGAGTTTCCCCGG  222

Query  223  GGAGCGGCCAACCACGACCTGACGGACACCACCCGGGCGGACCTGTCGCGAAATCGCCTTTCAGAAATTCCTAT  296
            ||||||||||||||.|||||||||||||||||||||||.||||||||.|||||||||||.||||||||.|||||
Sbjct  223  GGAGCGGCCAACCATGACCTGACGGACACCACCCGGGCCGACCTGTCACGAAATCGCCTCTCAGAAATCCCTAT  296

Query  297  AGAAGCATGTCACTTTGTTTCTCTGGAAAATCTCAACTTGTACCAAAATTGTATTCGTTATATTCCAGAGGCAA  370
            .||||||||||||||||||||.|||||||.|||.|||.|.|||||.|||||||||||.|||||.||||||||..
Sbjct  297  GGAAGCATGTCACTTTGTTTCCCTGGAAAGTCTTAACCTATACCAGAATTGTATTCGGTATATCCCAGAGGCTG  370

Query  371  TTTTAAACCTACAAGCTCTAACATTCTTAAATATTAGTCGGAACCAACTGTCAACATTGCCGGTACACTTGTGT  444
            ||.|||||.||||||||||.||||||.||||||||||||||||.|||||||||||||||||.||.|||||||||
Sbjct  371  TTCTAAACTTACAAGCTCTGACATTCCTAAATATTAGTCGGAATCAACTGTCAACATTGCCAGTCCACTTGTGT  444

Query  445  AATTTGCCATTGAAAGTCTTAATTGCTAGTAATAACAAATTGGTGTCACTTCCAGAAGAAATTGGACACCTTAG  518
            ||.||.|||.|||||||||||||.|||||.||||||||||||||.||.|||||.||||||||||||||.||.||
Sbjct  445  AACTTACCACTGAAAGTCTTAATCGCTAGCAATAACAAATTGGTCTCGCTTCCTGAAGAAATTGGACATCTCAG  518

Query  519  ACATTTGATGGAACTTGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCT  592
            ||||||||..|||||||||||.|||||||||||||||||||||.|.|||||||||||||||||.|||||.||||
Sbjct  519  ACATTTGACAGAACTTGATGTAAGCTGCAATGAAATTCAAACTGTGCCTTCCCAAATTGGTAATCTGGAAGCCT  592

Query  593  TGAGAGACCTTAATGTAAGAAGAAATCACCTAGTACATTTGCCTGAAGAGCTGGCGGAGTTGCCTTTGATACGG  666
            ||||||||.|.|||||||||||||||||.||..|||..|||||||||||||||||.|||.||||||||||||||
Sbjct  593  TGAGAGACTTCAATGTAAGAAGAAATCATCTTCTACGCTTGCCTGAAGAGCTGGCAGAGGTGCCTTTGATACGG  666

Query  667  TTAGACTTCTCATGCAATAAAATTACCACA---ATCCCTGTTTGTTATCGGAACCTCAGGCACCTACAGACGAT  737
            .|.||||||||.|||||||||||   ||||   ||||||||||||||.|||||||||.|||||||.|||..|||
Sbjct  667  CTCGACTTCTCGTGCAATAAAAT---CACAGTGATCCCTGTTTGTTACCGGAACCTCCGGCACCTCCAGGTGAT  737

Query  738  CACCCTAGATAACAATCCACTACAATCACCTCCTGCACAGATATGTATAAAAGGCAAAGTCCACATATTTAAAT  811
            ||||.|.||.|||||.||.||.||.||.||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct  738  CACCTTGGACAACAACCCGCTTCAGTCGCCTCCTGCACAGATATGTATAAAAGGCAAAATCCACATATTTAAAT  811

Query  812  ACCTGAACATACAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTATGATAGGAGACCGTTGGGTTTTGGCTCC  885
            ||||||||||||||||||||||||||||||||||||||||.||||||||..||||.||.|||||.|||||.|||
Sbjct  812  ACCTGAACATACAAGCTTGTAAGATTGCTCCAGATCTGCCAGATTATGAACGGAGGCCCTTGGGATTTGGATCC  885

Query  886  TGCCATGAAGAACTGTACTCAAGTCGCCCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGGTGA  959
            |||||||||||||||||||||.|.||.|||||.||||||||.|||||||||||||||||||||||.||||||||
Sbjct  886  TGCCATGAAGAACTGTACTCAGGCCGTCCTTACGGAGCCCTGGATTCAGGCTTCAATAGTGTGGATAGTGGTGA  959

Query  960  TAAGAGATGGTCAGGGAATGAACCTACAGATGAATTTTCAGATCTGCCTCTTCGAGTAGCAGAGATTACTAAAG  1033
            |||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.||||
Sbjct  960  TAAGAGATGGTCAGGGAATGAGCCTACAGATGAATTTTCGGATCTGCCTCTTCGAGTGGCAGAGATTACCAAAG  1033

Query 1034  AACAAAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAA  1107
            |.||||||||.||.|||||||||||||||||.|||||.|||.|||||.|||..||.|||||.||.||||||||.
Sbjct 1034  AGCAAAGACTGCGGAGAGAAAGCCAGTACCAGGAGAATCGCAGCAGTGTGGCGGTCACAAATGGTGGAGTGGAG  1107

Query 1108  CATGATCTGGATCAGATTGACTACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCCGAGGTGAGACAGCCCAA  1181
            ||||||||||||||||||||||||||.||||||||.||..||||.|||||.||...|||.||||.|||.|||||
Sbjct 1108  CATGATCTGGATCAGATTGACTACATTGACAGCTGTACTACAGAAGAAGAAGAAAACGACGTGAAACAACCCAA  1181

Query 1182  GGGACCAGACCCAGACAGCCTTAGTTCACAGTTTATGGCGTATATTGAACAGCGGCGAATCTCTCATGAGGGTT  1255
            ..|.|..|||.|..||||.||.||.||||||||||||||.|||||||||||.|||.|||||||.|||||||.||
Sbjct 1182  AAGCCTGGACACGAACAGTCTCAGCTCACAGTTTATGGCATATATTGAACAACGGAGAATCTCACATGAGGTTT  1255

Query 1256  CACCAGTAAAGCCAGTAGCCATTAGGGAGTTTCAAAAAACAGAAGATATGAGAAGATACTTACATCAAAACAGG  1329
            ||||||||||||||.|||||.||||.||||||||||||||||||||.||||.||||||||.|||||||||||||
Sbjct 1256  CACCAGTAAAGCCAATAGCCGTTAGAGAGTTTCAAAAAACAGAAGACATGAAAAGATACTCACATCAAAACAGG  1329

Query 1330  GTTCCAGCTGAGCCATCTTCCCTCCTGTCACTATCAGCAAGTCACAATCAGCTGTCACACACAGACCTGGAACT  1403
            |||||||.|||||||||||...|..|.|||.|..||.||||||||||||||||.|||||..|||||.||||.||
Sbjct 1330  GTTCCAGTTGAGCCATCTTTGGTGTTATCAATGCCACCAAGTCACAATCAGCTTTCACATTCAGACTTGGAGCT  1403

Query 1404  TCATCAGAGAAGGGAGCAGT-TAGTAGAGCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCAGTATGAGGAG  1476
            |||||||||.||.||||||| || |.|||.||||||||||||||||.||||||||||||||||||||.||||||
Sbjct 1404  TCATCAGAGGAGAGAGCAGTCTA-TTGAGTGCACTCGGAGAGAGGCACAGCTTGCTGCCCTGCAGTACGAGGAG  1476

Query 1477  GAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAACAAAAAGCATCACAAAGTCC  1550
            |||||||||||||||||||||||.|||||||||||||||||.||||||||||   |||||||||||||.|..||
Sbjct 1477  GAGAAAATAAGGACCAAGCAGATTCAGAGAGATGCTGTCCTAGACTTTGTCA---AAAAAGCATCACACAACCC  1547

Query 1551  ACAAAAACAGCACCCGCTCCTAGATGGCGTAGATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACACTG  1624
            |||.|.||||||                             |||||                         |||
Sbjct 1548  ACAGAGACAGCA-----------------------------GCCCC-------------------------CTG  1567

Query 1625  ---ATGATAGTGCCTTGTGCATGTCGCTGTCAGGGTTGAATCAAGTGGGCTGTGCTGCTACCCTGCCTCATTCT  1695
               |||            ||..|||.||||||||||||.||..||||.||||.|..|||||||.||||||||||
Sbjct 1568  GGAATG------------GCGAGTCACTGTCAGGGTTGGATGGAGTGAGCTGCGTGGCTACCCGGCCTCATTCT  1629

Query 1696  TCTGCCTTCACGCCTCTTAAGAGTGATGACAGACCTAATG----CTCTATTAAGTTCACCTGCAACAGAAACAG  1765
            |||||||||||.|||||.|||||.||..|||||..|.|||    |||    |||.|..|||...|||||.||||
Sbjct 1630  TCTGCCTTCACACCTCTCAAGAGCGAAAACAGAGTTGATGTCACCTC----AAGCTTTCCTATGACAGAGACAG  1699

Query 1766  TTCATCATTCCCCTGCATATTCTTTTCCTGCTGCTATCCAGAGAAATCAGCCTCAGCGCCCTGAAAGCTTCCTT  1839
            |.||||||||||||||.|||||.|||||||||||||.|||||||||||||||.|||||||||||||||||||||
Sbjct 1700  TCCATCATTCCCCTGCGTATTCCTTTCCTGCTGCTACCCAGAGAAATCAGCCCCAGCGCCCTGAAAGCTTCCTT  1773

Query 1840  TTCCGAGCAGGTGTCAGGGCAGAAACCAACAAAGGTCATGCTTCACCCCTTCCTCC-ATCTGCTGCACCTACCA  1912
            ||||||||.|.|||||||||||||.|.||.|||||||.|||.||.||.||| |||| .||..||||||||.|.|
Sbjct 1774  TTCCGAGCTGCTGTCAGGGCAGAAGCTAATAAAGGTCGTGCATCCCCGCTT-CTCCTGTCATCTGCACCTGCAA  1846

Query 1913  CTGATTCTACAGATTCCATAACAGGACAGAATTCAAGACAGAGAGAAGAAGAGCTGGAATTAATAGACCAACTG  1986
            |||||.||||||||.|.||||            |||||||||||||||||||||||.||||||||||.||.||.
Sbjct 1847  CTGATCCTACAGATGCTATAA------------CAAGACAGAGAGAAGAAGAGCTGAAATTAATAGATCAGCTA  1908

Query 1987  CGTAAACATATTGAGTACCGGTTGAAAGTGTCTCTACCTTGTGATCTCGGAGCAGCTCTAACTGACGGTGTTGT  2060
            ||.|||||.||||||||||||||||||||.|||.|.||.|||||.||.||||||||||||||||||||||||||
Sbjct 1909  CGAAAACACATTGAGTACCGGTTGAAAGTCTCTTTGCCCTGTGACCTTGGAGCAGCTCTAACTGACGGTGTTGT  1982

Query 2061  TCTTTGCCATTTGGCCAATCATGTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGCTGTAG--T  2132
            .||||||||.||||||||||||||.||.||||||||||||||||||||||||||.||.||.|||||.|| |  |
Sbjct 1983  ACTTTGCCACTTGGCCAATCATGTTCGGCCTCGATCTGTCCCAAGCATTCATGTCCCATCCCCAGCCGT-GCCT  2055

Query 2133  AAGT----------------------------------------------------------------------  2136
            ||.|                                                                      
Sbjct 2056  AAATTAACGATGGCAAAGTGCAGGCGGAATGTGGAGAACTTCCTGGATGCTTGCAGAAAAATCGGTGTACCCCA  2129

Query 2137  --------------------------------------------------------------------------  2136
                                                                                      
Sbjct 2130  GGACAATCTCTGTTCTCCTTCCGACATCCTTCAGCTAAACCTCAGCCTTAAGAGAACTGTTGAAACGCTGCTCT  2203

Query 2137  --------------------------------------------------------------------------  2136
                                                                                      
Sbjct 2204  CTCTTGGGGCACGTGCGGAAGAATCCAGCTTTGTCTCTCTGTCTGTCCAGCTTCTGGGTTTTGTGGCATTTTAC  2277

Query 2137  ------------------------------------------------------  2136
                                                                  
Sbjct 2278  TGTTCTTTAATGTTAATTCTCTGTGTGCTTTATTACCGGGTCTTCACCTACAGC  2331

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