Nucleotide Global Alignment

Description

Query:
TRCN0000474219
Subject:
XM_006522528.2
Aligned Length:
2418
Identities:
1745
Gaps:
420

Alignment

Query    1  ATGGCGGCCGCGGGCTTGGTCGCTGTGGCAGCGGCTGCCGAGTACTCTGGCACGGTAGCGTCGGGAGGTAACCT  74
            ||||||||||||||||||||.|||||||.|||||||||.||||||||||||.|.||.|||||.||.||.|||||
Sbjct    1  ATGGCGGCCGCGGGCTTGGTGGCTGTGGTAGCGGCTGCGGAGTACTCTGGCCCTGTGGCGTCCGGGGGAAACCT  74

Query   75  CCCTGGTGTTCACTGCGGCCCAAGCTCCGGGGCAGGCCCTGGTTTTGGCCCGGGCTCGTGGAGCCGCTCTCTCG  148
            |.|.||||....|||.||.||.|||.|.|||...|||||||||..||||||||||||.|||||||||||..|||
Sbjct   75  CTCCGGTGCGACCTGTGGGCCGAGCCCTGGGTTGGGCCCTGGTCCTGGCCCGGGCTCTTGGAGCCGCTCGGTCG  148

Query  149  ATCGAGCCCTGGAGGAGGCGGCGGTCACTGGGGTGCTGAGCCTGAGCGGCCGGAAACTGAGGGAGTTTCCCCGG  222
            |.|||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACCGAGCCCTGGAAGAGGCGGCGGTCACCGGGGTGCTGAGCCTGAGCGGCCGGAAACTGAGGGAGTTTCCCCGG  222

Query  223  GGAGCGGCCAACCACGACCTGACGGACACCACCCGGGCGGACCTGTCGCGAAATCGCCTTTCAGAAATTCCTAT  296
            ||||||||||||||.|||||||||||||||||||||||.||||||||.|||||||||||.||||||||.|||||
Sbjct  223  GGAGCGGCCAACCATGACCTGACGGACACCACCCGGGCCGACCTGTCACGAAATCGCCTCTCAGAAATCCCTAT  296

Query  297  AGAAGCATGTCACTTTGTTTCTCTGGAAAATCTCAACTTGTACCAAAATTGTATTCGTTATATTCCAGAGGCAA  370
            .||||||||||||||||||||.|||||||.|||.|||.|.|||||.|||||||||||.|||||.||||||||..
Sbjct  297  GGAAGCATGTCACTTTGTTTCCCTGGAAAGTCTTAACCTATACCAGAATTGTATTCGGTATATCCCAGAGGCTG  370

Query  371  TTTTAAACCTACAAGCTCTAACATTCTTAAATATTAGTCGGAACCAACTGTCAACATTGCCGGTACACTTGTGT  444
            ||.|||||.||||||||||.||||||.||||||||||||||||.|||||||||||||||||.||.|||||||||
Sbjct  371  TTCTAAACTTACAAGCTCTGACATTCCTAAATATTAGTCGGAATCAACTGTCAACATTGCCAGTCCACTTGTGT  444

Query  445  AATTTGCCATTGAAAGTCTTAATTGCTAGTAATAACAAATTGGTGTCACTTCCAGAAGAAATTGGACACCTTAG  518
            ||.||.|||.|||||||||||||.|||||.||||||||||||||.||.|||||.||||||||||||||.||.||
Sbjct  445  AACTTACCACTGAAAGTCTTAATCGCTAGCAATAACAAATTGGTCTCGCTTCCTGAAGAAATTGGACATCTCAG  518

Query  519  ACATTTGATGGAACTTGATGTGAGCTGCAATGAAATTCAAACTATACCTTCCCAAATTGGTAACCTGGAGGCCT  592
            ||||||||..|||||||||||.|||||||||||||||||||||.|.|||||||||||||||||.|||||.||||
Sbjct  519  ACATTTGACAGAACTTGATGTAAGCTGCAATGAAATTCAAACTGTGCCTTCCCAAATTGGTAATCTGGAAGCCT  592

Query  593  TGAGAGACCTTAATGTAAGAAGAAATCACCTAGTACATTTGCCTGAAGAGCTGGCGGAGTTGCCTTTGATACGG  666
            ||||||||.|.|||||||||||||||||.||..|||..|||||||||||||||||.|||.||||||||||||||
Sbjct  593  TGAGAGACTTCAATGTAAGAAGAAATCATCTTCTACGCTTGCCTGAAGAGCTGGCAGAGGTGCCTTTGATACGG  666

Query  667  TTAGACTTCTCATGCAATAAAATTACCACA---ATCCCTGTTTGTTATCGGAACCTCAGGCACCTACAGACGAT  737
            .|.||||||||.|||||||||||   ||||   ||||||||||||||.|||||||||.|||||||.|||..|||
Sbjct  667  CTCGACTTCTCGTGCAATAAAAT---CACAGTGATCCCTGTTTGTTACCGGAACCTCCGGCACCTCCAGGTGAT  737

Query  738  CACCCTAGATAACAATCCACTACAATCACCTCCTGCACAGATATGTATAAAAGGCAAAGTCCACATATTTAAAT  811
            ||||.|.||.|||||.||.||.||.||.||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct  738  CACCTTGGACAACAACCCGCTTCAGTCGCCTCCTGCACAGATATGTATAAAAGGCAAAATCCACATATTTAAAT  811

Query  812  ACCTGAACATACAAGCTTGTAAGATTGCTCCAGATCTGCCGGATTATGATAGGAGACCGTTGGGTTTTGGCTCC  885
            ||||||||||||||||||||||||||||||||||||||||.||||||||..||||.||.|||||.|||||.|||
Sbjct  812  ACCTGAACATACAAGCTTGTAAGATTGCTCCAGATCTGCCAGATTATGAACGGAGGCCCTTGGGATTTGGATCC  885

Query  886  TGCCATGAAGAACTGTACTCAAGTCGCCCTTATGGAGCCCTTGATTCAGGCTTCAATAGTGTGGACAGTGGTGA  959
            |||||||||||||||||||||.|.||.|||||.||||||||.|||||||||||||||||||||||.||||||||
Sbjct  886  TGCCATGAAGAACTGTACTCAGGCCGTCCTTACGGAGCCCTGGATTCAGGCTTCAATAGTGTGGATAGTGGTGA  959

Query  960  TAAGAGATGGTCAGGGAATGAACCTACAGATGAATTTTCAGATCTGCCTCTTCGAGTAGCAGAGATTACTAAAG  1033
            |||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.||||
Sbjct  960  TAAGAGATGGTCAGGGAATGAGCCTACAGATGAATTTTCGGATCTGCCTCTTCGAGTGGCAGAGATTACCAAAG  1033

Query 1034  AACAAAGACTACGAAGAGAAAGCCAGTACCAAGAGAACCGCGGCAGTTTGGTAGTAACAAACGGCGGAGTGGAA  1107
            |.||||||||.||.|||||||||||||||||.|||||.|||.|||||.|||..||.|||||.||.||||||||.
Sbjct 1034  AGCAAAGACTGCGGAGAGAAAGCCAGTACCAGGAGAATCGCAGCAGTGTGGCGGTCACAAATGGTGGAGTGGAG  1107

Query 1108  CATGATCTGGATCAGATTGACTACATAGACAGCTGCACCGCAGAGGAAGAGGAGGCCGAGGTGAGACAGCCCAA  1181
            ||||||||||||||||||||||||||.||||||||.||..||||.|||||.||...|||.||||.|||.|||||
Sbjct 1108  CATGATCTGGATCAGATTGACTACATTGACAGCTGTACTACAGAAGAAGAAGAAAACGACGTGAAACAACCCAA  1181

Query 1182  GGGACCAGACCCAGACAGCCTTAGTTCACAGTTTATGGCGTATATTGAACAGCGGCGAATCTCTCATGAGGGTT  1255
            ..|.|..|||.|..||||.||.||.||||||||||||||.|||||||||||.|||.|||||||.|||||||.||
Sbjct 1182  AAGCCTGGACACGAACAGTCTCAGCTCACAGTTTATGGCATATATTGAACAACGGAGAATCTCACATGAGGTTT  1255

Query 1256  CACCAGTAAAGCCAGTAGCCATTAGGGAGTTTCAAAAAACAGAAGATATGAGAAGATACTTACATCAAAACAGG  1329
            ||||||||||||||.|||||.||||.||||||||||||||||||||.||||.||||||||.|||||||||||||
Sbjct 1256  CACCAGTAAAGCCAATAGCCGTTAGAGAGTTTCAAAAAACAGAAGACATGAAAAGATACTCACATCAAAACAGG  1329

Query 1330  GTTCCAGCTGAGCCATCTTCCCTCCTGTCACTATCAGCAAGTCACAATCAGCTGTCACACACAGACCTGGAACT  1403
            |||||||.|||||||||||...|..|.|||.|..||.||||||||||||||||.|||||..|||||.||||.||
Sbjct 1330  GTTCCAGTTGAGCCATCTTTGGTGTTATCAATGCCACCAAGTCACAATCAGCTTTCACATTCAGACTTGGAGCT  1403

Query 1404  TCATCAGAGAAGGGAGCAGT-TAGTAGAGCGCACTCGGAGAGAGGCTCAGCTTGCTGCCCTGCAGTATGAGGAG  1476
            |||||||||.||.||||||| || |.|||.||||||||||||||||.||||||||||||||||||||.||||||
Sbjct 1404  TCATCAGAGGAGAGAGCAGTCTA-TTGAGTGCACTCGGAGAGAGGCACAGCTTGCTGCCCTGCAGTACGAGGAG  1476

Query 1477  GAGAAAATAAGGACCAAGCAGATCCAGAGAGATGCTGTCCTGGACTTTGTCAAACAAAAAGCATCACAAAGTCC  1550
            |||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||||||||.|..||
Sbjct 1477  GAGAAAATAAGGACCAAGCAGATTCAGAGAGATGCTGTCCTAGACTTTGTCAAACAGAAAGCATCACACAACCC  1550

Query 1551  ACAAAAACAGCA-CCCGCTCCTAG--ATGGCGTAGATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACA  1621
            |||.|.|||||| |||   |||.|  |||||         |||||..|||||||||||||||||||.|||||||
Sbjct 1551  ACAGAGACAGCAGCCC---CCTGGGAATGGC---------GAGTGTTCCTTCCCATCCAGAAGGTCCCAGCACA  1612

Query 1622  CTGATGATAGTGCCTTGTGCATGTCGCTGTCAGGGTTGAATCAAGTGGGCTGTGCTGCTACCCTGCCTCATTCT  1695
            |||||||.|||||||||....||||.||||||||||||.||..||||.||||.|..|||||||.||||||||||
Sbjct 1613  CTGATGACAGTGCCTTGCTAGTGTCACTGTCAGGGTTGGATGGAGTGAGCTGCGTGGCTACCCGGCCTCATTCT  1686

Query 1696  TCTGCCTTCACGCCTCTTAAGAGTGATGACAGACCTAATGCTCTATTAAGTTCACCTGCAACAGAAACAGTTCA  1769
            |||||||||||.|||||.|||||.||..|||||..|.|||           |||||| |||             
Sbjct 1687  TCTGCCTTCACACCTCTCAAGAGCGAAAACAGAGTTGATG-----------TCACCT-CAA-------------  1735

Query 1770  TCATTCCCCTGCATATTCTTTTCCTGCTGCTATCCAGAGAAATCAGCCTCAGCGCCCTGAAAGCTTCCTTTTCC  1843
                      ||       ||||||                                                 
Sbjct 1736  ----------GC-------TTTCCT-------------------------------------------------  1743

Query 1844  GAGCAGGTGTCAGGGCAGAAACCAACAAAGGTCATGCTTCACCCCTTCCTCC-ATCTGCTGCACCTACCACTGA  1916
                       |.|.||||.||      |||||.|||.||.||.||| |||| .||..||||||||.|.|||||
Sbjct 1744  -----------ATGACAGAGAC------AGGTCGTGCATCCCCGCTT-CTCCTGTCATCTGCACCTGCAACTGA  1799

Query 1917  TTCTACAGATTCCATAACAGGACAGAATTCAAGACAGAGAGAAGAAGAGCTGGAATTAATAGACCAACTGCGTA  1990
            |.||||||||.|.||||            |||||||||||||||||||||||.||||||||||.||.||.||.|
Sbjct 1800  TCCTACAGATGCTATAA------------CAAGACAGAGAGAAGAAGAGCTGAAATTAATAGATCAGCTACGAA  1861

Query 1991  AACATATTGAGTACCGGTTGAAAGTGTCTCTACCTTGTGATCTCGGAGCAGCTCTAACTGACGGTGTTGTTCTT  2064
            ||||.||||||||||||||||||||.|||.|.||.|||||.||.||||||||||||||||||||||||||.|||
Sbjct 1862  AACACATTGAGTACCGGTTGAAAGTCTCTTTGCCCTGTGACCTTGGAGCAGCTCTAACTGACGGTGTTGTACTT  1935

Query 2065  TGCCATTTGGCCAATCATGTGCGACCTCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGCTGTAG--TAAGT  2136
            |||||.||||||||||||||.||.||||||||||||||||||||||||||.||.||.|||||.|| |  |||.|
Sbjct 1936  TGCCACTTGGCCAATCATGTTCGGCCTCGATCTGTCCCAAGCATTCATGTCCCATCCCCAGCCGT-GCCTAAAT  2008

Query 2137  --------------------------------------------------------------------------  2136
                                                                                      
Sbjct 2009  TAACGATGGCAAAGTGCAGGCGGAATGTGGAGAACTTCCTGGATGCTTGCAGAAAAATCGGTGTACCCCAGGAC  2082

Query 2137  --------------------------------------------------------------------------  2136
                                                                                      
Sbjct 2083  AATCTCTGTTCTCCTTCCGACATCCTTCAGCTAAACCTCAGCCTTAAGAGAACTGTTGAAACGCTGCTCTCTCT  2156

Query 2137  --------------------------------------------------------------------------  2136
                                                                                      
Sbjct 2157  TGGGGCACGTGCGGAAGAATCCAGCTTTGTCTCTCTGTCTGTCCAGCTTCTGGGTTTTGTGGCATTTTACTGTT  2230

Query 2137  --------------------------------------------------  2136
                                                              
Sbjct 2231  CTTTAATGTTAATTCTCTGTGTGCTTTATTACCGGGTCTTCACCTACAGC  2280

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