Nucleotide Global Alignment
Description
- Query:
- TRCN0000474479
- Subject:
- NR_024174.3
- Aligned Length:
- 2791
- Identities:
- 1149
- Gaps:
- 1637
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAGCACCGCCTCTTCCGCGTTCTCGGAGGAGCGATCTGCAGGTAGGGGTGCGCGCGACCGCTCCCCGGCGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCAGCGAAGGTTTCCATGTCAGAGGCCGATGGAGAACTGAAGATTGCCACCTACGCACAAAGGCCATTGAGAC 148
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 149 ACTTCGTGTAGCTGGAAGACACCAACTTCCTGACAGGAGCTTTATTTCATTTGGGATTTCAAGTTTACAGATGG 222
Query 5 TATCTTCTCAAAAGTTGGAAAAACCTATAGAGATGGGCAGTAGCGAACCCCTTCCCATCGCAGATGGTGACAGG 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TATCTTCTCAAAAGTTGGAAAAACCTATAGAGATGGGCAGTAGCGAACCCCTTCCCATCGCAGATGGTGACAGG 296
Query 79 AGGAGGAAGAAGAAGCGGAGGGGCCGGGCCACTGACTCCTTGCCAGGAAAGTTTGAAGATATGTACAAGCTGAC 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGAGGAAGAAGAAGCGGAGGGGCCGGGCCACTGACTCCTTGCCAGGAAAGTTTGAAGATATGTACAAGCTGAC 370
Query 153 CTCTGAATTGCTTGGAGAGGGAGCCTATGCCAAAGTTCAAGGTGCCGTGAGCCTACAGAATGGCAAAGAGTATG 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCTGAATTGCTTGGAGAGGGAGCCTATGCCAAAGTTCAAGGTGCCGTGAGCCTACAGAATGGCAAAGAGTATG 444
Query 227 CCGTCAAAATCATCGAGAAACAAGCAGGGCACAGTCGGAGTAGGGTGTTTCGAGAGGTGGAGACGCTGTATCAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCGTCAAAATCATCGAGAAACAAGCAGGGCACAGTCGGAGTAGGGTGTTTCGAGAGGTGGAGACGCTGTATCAG 518
Query 301 TGTCAGGGAAACAAGAACATTTTGGAGCTGATTGAGTTCTTTGAAGATGACACAAGGTTTTACTTGGTCTTTGA 374
||||||||||||||
Sbjct 519 TGTCAGGGAAACAA------------------------------------------------------------ 532
Query 375 GAAATTGCAAGGAGGTTCCATCTTAGCCCACATCCAGAAGCAAAAGCACTTCAATGAGCGAGAAGCCAGCCGAG 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 --------------GTTCCATCTTAGCCCACATCCAGAAGCAAAAGCACTTCAATGAGCGAGAAGCCAGCCGAG 592
Query 449 TGGTGCGGGACGTTGCTGCTGCCCTTGACTTCCTGCATACCAAAGACAAAGTCTCTCTCTGTCACCTAGGCTGG 522
|||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 593 TGGTGCGGGACGTTGCTGCTGCCCTTGACTTCCTGCATACCAAAGGCA-------------------------- 640
Query 523 AGTGCTATGGCGCCATCAGGGCTCACTGCAGCCCCAACCTCCCTGGGCTCCAGTGATCCTCCCACCTCAGCCTC 596
Sbjct 641 -------------------------------------------------------------------------- 640
Query 597 CCAAGTAGCTGGGACTACANGCATTTGCTCATNGTGATNTGAAACCAAGNAAAATATATTGTGTGAATCTCCAG 670
||||||||.|||||.|||||||| .|||||||||||||||||||||||
Sbjct 641 ------------------------TTGCTCATCGTGATCTGAAACCA--GAAAATATATTGTGTGAATCTCCA- 687
Query 671 GAAAAGGTGTCTCCAGTGAAAAATCTGTGACTTTGACTTGGGCAGTGGGATGAAACTGAACAACTCCTTGTACC 744
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 688 GAAAAGGTGTCTCCAGTG-AAAATCTGTGACTTTGACTTGGGCAGTGGGATGAAACTGAACAACTCC-TGTACC 759
Query 745 CCCATAACCACACCAGAGCTGACCACCCCATGTGGCTCTGCAGAATACATGGCCCCTGAAGGTAGTNGAGGTCT 818
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||.|||||||
Sbjct 760 CCCATAACCACACCAGAGCTGACCACCCCATGTGGCTCTGCAGAATACATGGCCCCTG-AGGTAGTGGAGGTCT 832
Query 819 TCACGGACCAGGCCACATTCTACGACAAGCGCTGTGACCTGTGGAGCCTGGGCGTGGTCCTCTACATCATGCTG 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 TCACGGACCAGGCCACATTCTACGACAAGCGCTGTGACCTGTGGAGCCTGGGCGTGGTCCTCTACATCATGCTG 906
Query 893 AGTGGCTACCCACCCTTCGTGGGTCACTGCGGGGCCGACTGTGGCTGGGACCGGGGCGAGGTCTGCAGGGTGTG 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 AGTGGCTACCCACCCTTCGTGGGTCACTGCGGGGCCGACTGTGGCTGGGACCGGGGCGAGGTCTGCAGGGTGTG 980
Query 967 CCAGAACAAGCTGTTTGAAAGCATCCAGGAAGGCAAGTATGAGTTTCCTGACAAGGACTGGGCACACATCTCCA 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 981 CCAGAACAAGCTGTTTGAAAGCATCCAGGAAGGCAAGTATGAGTTTCCTGACAAGGACTGGGCACACATCTCCA 1054
Query 1041 GTGAAGCCAAAGACCTCATCTCCAAGCTCCTGGTGCGAGATGCAAAGCAGAGACTTAGCGCCGCCCAAGTTCTG 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 GTGAAGCCAAAGACCTCATCTCCAAGCTCCTGGTGCGAGATGCAAAGCAGAGACTTAGCGCCGCCCAAGTTCTG 1128
Query 1115 CAGCACCCATGGGTGCAGGGGCAAGCTCCAGAAAAGGGACTCCCCACGCCGCAAGTCCTCCAGAGGAACAGCAG 1188
|||||||||||||||||||| ||||||||||
Sbjct 1129 CAGCACCCATGGGTGCAGGG--------------------------------------------GGAACAGCAG 1158
Query 1189 CACAATGGACCTGACGCTCTTCGCAGCTGAGGCCATCGCCCTTAACCGCCAGCTATCTCAGCACGAAGAGAACG 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159 CACAATGGACCTGACGCTCTTCGCAGCTGAGGCCATCGCCCTTAACCGCCAGCTATCTCAGCACGAAGAGAACG 1232
Query 1263 AACTAGCAGAGGAGCCAGAGGCACTAGCTGATGGCCTCTGCTCCATGAAGCTTTCCCCTCCCTGCAAGTCACGC 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1233 AACTAGCAGAGGAGCCAGAGGCACTAGCTGATGGCCTCTGCTCCATGAAGCTTTCCCCTCCCTGCAAGTCACGC 1306
Query 1337 CTGGCCCGGAGACGGGCCCTGGCCCAGGCAGGCCGTGGTGAAGACAGGAGCCCGCCCACAGCACTC-------- 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1307 CTGGCCCGGAGACGGGCCCTGGCCCAGGCAGGCCGTGGTGAAGACAGGAGCCCGCCCACAGCACTCTGAAATGC 1380
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1381 TCCAGTCACACCTTATAGGCCCTAGGCCTGGCCAGGCATTGTCCCCTGGAAACCTGTGTGGCTAAAGTCTGCTG 1454
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1455 AGCAGGCAGCAGCCTCTGCTCTGTGGCTCCATTCAGGCTTTTTCATCTACGAAGGCCCTGAGGTTCCCATCAAC 1528
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1529 CCCCATTTCCCTAGGGTCCTGGAGGAAAAAGCTTTTTCCAAAGGGGTTGTCTTTGAAAAGGAAAGCAATCACTT 1602
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1603 CTCACTTTGCATAATTGCCTGCAGCAGGAACATCTCTTCACTGGGCTCCACCTGCTCACCCGCCTGCAGATCTG 1676
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1677 GGATCCAGCCTGCTCTCACCGCTGTAGCTGTGGCGGCTGGGGCTGCAGCCTGCAGGGAGAAGCAAGAAGCATCA 1750
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1751 GTTGACAGAGGCTGCCGACACGTGCCTCTTCCCTCTCTTCTCTGTCACCCTCCTCTGGCGGTCCTTCCACCTTC 1824
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1825 CTCTGTCCTCCGGATGTCCTCTTTGCCCGTCTTCTCCCTTGGCTGAGCAAAGCCATCCCCTCAATTCAGGGAAG 1898
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1899 GGCAAGGAGCCTTCCTCATTCAGGAAATCAAATCAGTCTTCCGGTCTGCAGCACGGAAAAGCACATAATCTTTC 1972
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1973 TTTGCTGTGACTGAAATGTATCCCTCGTTTATCATCCCCTTTGTTTGTGATTGCTGCTAAAGTCAGTAGTATCG 2046
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2047 TTTTTTTAAAAAAAAAGTTTGGTGTTTTTAACCATGCTGTTCCAGCAAAGATGATACCTTAAACTCCCACTGCA 2120
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2121 AGCCCATGAACTTCCCAGAGAGTGGAACGGCTTGCTCTTCTTTCTAGAATGTCCATGCACTTGGGTTTTAATCA 2194
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2195 GCAGTTCCCTATTATTCTGATTTTAAGCTGTTCCTGTGATGAACTTAGAGACAGCATCGGTGTCTGCTGCTGTG 2268
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2269 TCCCCAGGTCTTGTGTGGGTGGCACAGATCTGGGCAGTTAGATAGTGCTCTGTGCCTAAGGTGAAGCCACACTA 2342
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2343 GGGTGAAGCCTCACTTCCCTGTTTGAGCAATGCAGTGCCTGCTGCCCGTGTGCATGAAGGTACAGCCATTCAGA 2416
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2417 TAAGTGGAACTATTGAGTTACATAAAGAAAATAGATTTGCATTTGTCAGGCAGACGTTTATACAACACCACGGT 2490
Query 1403 ----------------------------------------------------- 1402
Sbjct 2491 GCTTTTATACATTGTGCTTATTTTAATAAAACTGAAATTCTATGTGTGGCCTA 2543
