Nucleotide Global Alignment

Description

Query:
TRCN0000474722
Subject:
XM_006509901.1
Aligned Length:
1876
Identities:
1499
Gaps:
185

Alignment

Query    1  ATGGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAGCGG-GGC--------CAGCAGTGGGGATACGGCCCC  65
            |||||.||.|||.||||.|||||||||||.|||||..|||| |||        |.||.||||||||.|||.|||
Sbjct    1  ATGGCGAGCCGAAGGGCCCGGCAGCGCCTCAAGGGTGGCGGCGGCGGTGGCGGCGGCGGTGGGGATGCGGGCCC  74

Query   66  GGCTGCGGACAAGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTG  139
            |||.|||||.|||||   |||.|.|||.||||||||.|||||   .|||||.||||..|||.|.|||   ||||
Sbjct   75  GGCGGCGGAGAAGCT---GGAACAGCTCGGCAGCCGGGAGGC---AGGCGCAGAGCCGCGGCCAGAG---TCTG  139

Query  140  GGAACAAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGTTATGT  213
            |.||.||||||||.|||||||||||.|||||||||||.||||||||||||||||||||.|||||.|||||.||.
Sbjct  140  GAAATAAAGCAGGGCAAGTCTGGGCCCCTGAAGGATCCACTGCTTTCAAGTGTCTGCTCTCAGCGAGGTTGTGC  213

Query  214  GCTGCTCTCCTGAGCAACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCAACACACTACCTCATCTA  287
            ||.||.||.||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  214  GCAGCCCTTCTGAGCAACATCTCGGACTGTGATGAAACATTCAACTACTGGGAACCAACACACTACCTCATCTA  287

Query  288  TGGGGAAGGG-TTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCAT  360
             .|||||||| ||.|||||.||||||||||||||.|..||||||||.|||||.||||||||||||.||||.||.
Sbjct  288  -CGGGAAGGGATTCCAGACATGGGAATATTCCCCCGTGTATGCCATCCGCTCATATGCTTACCTGCTGCTGCAC  360

Query  361  GCCTGGCCAGCTGCATTTCATGCAAGAATTCTACAAACTAATAAGATTCTTGTGTTTTACTTTTTGCGATGTCT  434
            ||||||||||||||||||||||||.|.|||||.||.|||||.|||||||||||.||.|||||||||.|||||||
Sbjct  361  GCCTGGCCAGCTGCATTTCATGCACGGATTCTGCAGACTAACAAGATTCTTGTATTCTACTTTTTGAGATGTCT  434

Query  435  TCTGGCTTTTGTGAGCTGTATTTGTGAACTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGA  508
            .||||||||||||||||||.|||||||||||||||||||.||||||||||||||||||||||||.||||.||||
Sbjct  435  CCTGGCTTTTGTGAGCTGTGTTTGTGAACTTTACTTTTATAAGGCTGTGTGCAAGAAGTTTGGGCTGCATGTGA  508

Query  509  GTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTCCTAGTAGC  582
            |||||||||||||.||||||.||||.||||||||.||||||||.|||||||||||.||||||||.||.||.|||
Sbjct  509  GTCGAATGATGCTGGCCTTCCTGGTGCTCAGCACGGGCATGTTCTGCTCATCATCTGCATTCCTCCCCAGCAGC  582

Query  583  TTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGT  656
            |||||.||||||||.|||.||||.||||||||.||||||||||||||||||||..|||||||||||||||||||
Sbjct  583  TTCTGCATGTACACCACGCTGATCGCCATGACGGGATGGTATATGGACAAGACACCCATTGCTGTGCTGGGAGT  656

Query  657  AGCAGCTGGGGCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACCCATTGCCTTTGATTTGCTGGTCA  730
            |||||||||.||.||||||||.|||||.||.|||||||||||||||||||||||.|||||.||.|||||||.||
Sbjct  657  AGCAGCTGGTGCCATCTTAGGGTGGCCGTTTAGTGCAGCTCTTGGTTTACCCATCGCCTTCGACTTGCTGGCCA  730

Query  731  TGAAACACAGGTGGAAGAGTTTCTTTCAT-TGGTCGCTGATGGCCCTCATACTATTTCTGGTGCCTGTGGTGGT  803
            .|||.||||||||||||||||| |.||.| |||||.|||.|||||||....||.||..|||||||.||||||||
Sbjct  731  GGAAGCACAGGTGGAAGAGTTT-TCTCCTCTGGTCCCTGGTGGCCCTGGCTCTCTTCTTGGTGCCCGTGGTGGT  803

Query  804  CATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTC  877
            ||||||||||||||||||.||||||||||||.||||.||.||||||||||||||||||||.||||||||..|||
Sbjct  804  CATTGACAGCTACTATTACGGGAAGTTGGTGGTTGCCCCTCTCAACATTGTTTTGTATAACGTCTTTACGTCTC  877

Query  878  ATGGACCTGATCTTTATGGTACAGAACCCTGGTATTTCTATTTAATTAATGGATTTCTGAATTTCAATGTAGCC  951
            ||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.||||||||.|||
Sbjct  878  ATGGACCTGATCTTTATGGTACAGAACCATGGTATTTCTATTTAATCAATGGATTTCTGAACTTCAATGTTGCC  951

Query  952  TTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAGATTTCATGTTCAGAA  1025
            ||||||||||||||.||.||..|.||||||||||..||||||||.||||||||||||||.||.|||||||||||
Sbjct  952  TTTGCTTTGGCTCTTCTGGTTTTGCCACTGACTTTCCTTATGGAGTACCTGCTGCAGAGGTTCCATGTTCAGAA  1025

Query 1026  TTTAGGCCACCCGTATTGGCTTACCTTGGCTCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTCACA  1099
            ||||||.||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1026  TTTAGGACACCCGTATTGGCTGACCTTGGCGCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTCATA  1099

Query 1100  AAGAGGAGAGATTTCTTTTCCCTGTGTATCCACTTATATGTCTCTGTGGCGCTGTGGCTCTCTCTGCACTTCAG  1173
            ||||.|||.|.|||||.|||||.||.|||||.||.|||||.||||||||.|||||.|||||.|||||||||   
Sbjct 1100  AAGAAGAGCGCTTTCTCTTCCCAGTCTATCCGCTCATATGCCTCTGTGGTGCTGTTGCTCTTTCTGCACTT---  1170

Query 1174  CACAGTTTTCTGTACTTCCAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGAC  1247
                              ||||||||.|||||||||||||||||||||||.|||||||||||.||.||.|||||
Sbjct 1171  ------------------CAGAAATGCTACCACTTTGTGTTTCAACGATACCGCCTGGAGCATTACACGGTGAC  1226

Query 1248  ATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACTGTTCA  1321
            .||.||.||||||||..|.||.||.||.||||||||||||||||||||.||.||.|||||||||||.|||||||
Sbjct 1227  GTCCAACTGGCTGGCGCTGGGCACAGTTTTCCTGTTTGGGCTCTTGTCGTTCTCCCGCTCTGTGGCTCTGTTCA  1300

Query 1322  GAGGATATCACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACTGTC  1395
            |||||||.|||||||||||||||||.|||||||||||||||.|||||||.||||||||||||||||||||||||
Sbjct 1301  GAGGATACCACGGGCCCCTTGATTTATATCCAGAATTTTACAGAATTGCCACAGACCCAACCATCCACACTGTC  1374

Query 1396  CCAGAAGGCAGACCTGTGAATGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCCTGA  1469
            |||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||
Sbjct 1375  CCAGAAGGCAGGCCCGTGAACGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGTAGCTTCCTTCTGCCTGA  1448

Query 1470  CAATTGGCAGCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTTTGCAGAAGGACCTCTGG  1543
            |||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||.|||||.|||||.||||
Sbjct 1449  CAATTGGCAGCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGCTACCAAAGCCTTTCGCAGAGGGACCACTGG  1522

Query 1544  CCACCCGGATTGTTCCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATATTGATATCAGTAAA  1617
            |||||.|||.||||||.|||.|||||||.||||||||.|.|||.|||||.||||||||                
Sbjct 1523  CCACCAGGACTGTTCCCACTCACATGAACGACCAGAACCGAGAGGAGCCTTCCAGATA----------------  1580

Query 1618  TGCCATTATTTAGTGGATTTGGACACCATGAGAGAAACACCCCGGGAGCCAAAATATTCATCCAATAAAGAAGA  1691
                                                      ||                              
Sbjct 1581  ------------------------------------------CG------------------------------  1582

Query 1692  ATGGATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCATTCTATGTCC  1765
                                                       |||||.|||.||||.||||||||||||||.|
Sbjct 1583  -------------------------------------------TCTTCCAAGTTGCTTCGGGCATTCTATGTTC  1613

Query 1766  CCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATCAGG  1839
            |||||||||||||||||||.||.|||||.||.||||||||||||||.||.||.|||||||||||||..|.||||
Sbjct 1614  CCTTCCTGTCAGATCAGTACACGGTGTATGTGAACTACACCATCCTGAAGCCTCGGAAAGCAAAGCCGAGCAGG  1687

Query 1840  AAGAAAAGTGGAGGT-----------  1854
            |||||||||||||||           
Sbjct 1688  AAGAAAAGTGGAGGTTAGCACCCCGG  1713

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