Nucleotide Global Alignment

Description

Query:
TRCN0000474722
Subject:
XM_017313065.1
Aligned Length:
1856
Identities:
1237
Gaps:
463

Alignment

Query    1  ATGGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCCCGGCTGCGGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CAAGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTGGGAACAAAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTGAGCAACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCAACACACTACCTCATCTATGGGGAAGG  296
                                  ||||||||||||||||||||||.|||||||||||||||||||| .|||||||
Sbjct    1  ----------------------ATGAAACATTCAACTACTGGGAACCAACACACTACCTCATCTA-CGGGAAGG  51

Query  297  G-TTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCA  369
            | ||.|||||.||||||||||||||.|..||||||||.|||||.||||||||||||.||||.||.|||||||||
Sbjct   52  GATTCCAGACATGGGAATATTCCCCCGTGTATGCCATCCGCTCATATGCTTACCTGCTGCTGCACGCCTGGCCA  125

Query  370  GCTGCATTTCATGCAAGAATTCTACAAACTAATAAGATTCTTGTGTTTTACTTTTTGCGATGTCTTCTGGCTTT  443
            |||||||||||||||.|.|||||.||.|||||.|||                                      
Sbjct  126  GCTGCATTTCATGCACGGATTCTGCAGACTAACAAG--------------------------------------  161

Query  444  TGTGAGCTGTATTTGTGAACTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGA  517
                                             ||||||||||||||||||||||.||||.|||||||||||||
Sbjct  162  ---------------------------------GGCTGTGTGCAAGAAGTTTGGGCTGCATGTGAGTCGAATGA  202

Query  518  TGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTCCTAGTAGCTTCTGTATG  591
            ||||.||||||.||||.||||||||.||||||||.|||||||||||.||||||||.||.||.||||||||.|||
Sbjct  203  TGCTGGCCTTCCTGGTGCTCAGCACGGGCATGTTCTGCTCATCATCTGCATTCCTCCCCAGCAGCTTCTGCATG  276

Query  592  TACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGG  665
            |||||.|||.||||.||||||||.||||||||||||||||||||..||||||||||||||||||||||||||||
Sbjct  277  TACACCACGCTGATCGCCATGACGGGATGGTATATGGACAAGACACCCATTGCTGTGCTGGGAGTAGCAGCTGG  350

Query  666  GGCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACCCATTGCCTTTGATTTGCTGGTCATGAAACACA  739
            .||.||||||||.|||||.||.|||||||||||||||||||||||.|||||.||.|||||||.||.|||.||||
Sbjct  351  TGCCATCTTAGGGTGGCCGTTTAGTGCAGCTCTTGGTTTACCCATCGCCTTCGACTTGCTGGCCAGGAAGCACA  424

Query  740  GGTGGAAGAGTTTCTTTCAT-TGGTCGCTGATGGCCCTCATACTATTTCTGGTGCCTGTGGTGGTCATTGACAG  812
            ||||||||||||| |.||.| |||||.|||.|||||||....||.||..|||||||.|||||||||||||||||
Sbjct  425  GGTGGAAGAGTTT-TCTCCTCTGGTCCCTGGTGGCCCTGGCTCTCTTCTTGGTGCCCGTGGTGGTCATTGACAG  497

Query  813  CTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTCATGGACCTG  886
            |||||||||.||||||||||||.||||.||.||||||||||||||||||||.||||||||..||||||||||||
Sbjct  498  CTACTATTACGGGAAGTTGGTGGTTGCCCCTCTCAACATTGTTTTGTATAACGTCTTTACGTCTCATGGACCTG  571

Query  887  ATCTTTATGGTACAGAACCCTGGTATTTCTATTTAATTAATGGATTTCTGAATTTCAATGTAGCCTTTGCTTTG  960
            ||||||                                                                    
Sbjct  572  ATCTTT--------------------------------------------------------------------  577

Query  961  GCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAGATTTCATGTTCAGAATTTAGGCCA  1034
                                                                   ||||||||||||||||.||
Sbjct  578  -------------------------------------------------------ATGTTCAGAATTTAGGACA  596

Query 1035  CCCGTATTGGCTTACCTTGGCTCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTCACAAAGAGGAGA  1108
            ||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.|||.
Sbjct  597  CCCGTATTGGCTGACCTTGGCGCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTCATAAAGAAGAGC  670

Query 1109  GATTTCTTTTCCCTGTGTATCCACTTATATGTCTCTGTGGCGCTGTGGCTCTCTCTGCACTTCAGCACAGTTTT  1182
            |.|||||.|||||.||.|||||.||.|||||.||||||||.|||||.|||||.|||||||||            
Sbjct  671  GCTTTCTCTTCCCAGTCTATCCGCTCATATGCCTCTGTGGTGCTGTTGCTCTTTCTGCACTT------------  732

Query 1183  CTGTACTTCCAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGAATTG  1256
                     ||||||||.|||||||||||||||||||||||.|||||||||||.||.||.|||||.||.||.||
Sbjct  733  ---------CAGAAATGCTACCACTTTGTGTTTCAACGATACCGCCTGGAGCATTACACGGTGACGTCCAACTG  797

Query 1257  GCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACTGTTCAGAGGATATC  1330
            ||||||..|.||.||.||.||||||||||||||||||||.||.||.|||||||||||.||||||||||||||.|
Sbjct  798  GCTGGCGCTGGGCACAGTTTTCCTGTTTGGGCTCTTGTCGTTCTCCCGCTCTGTGGCTCTGTTCAGAGGATACC  871

Query 1331  ACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACTGTCCCAGAAGGC  1404
            ||||||||||||||||.|||||||||||||||.|||||||.|||||||||||||||||||||||||||||||||
Sbjct  872  ACGGGCCCCTTGATTTATATCCAGAATTTTACAGAATTGCCACAGACCCAACCATCCACACTGTCCCAGAAGGC  945

Query 1405  AGACCTGTGAATGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCA  1478
            ||.||.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||
Sbjct  946  AGGCCCGTGAACGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGTAGCTTCCTTCTGCCTGACAATTGGCA  1019

Query 1479  GCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTTTGCAGAAGGACCTCTGGCCACCCGGA  1552
            ||||||||||||||||||||||||||||||||||.|||||||.|||||.|||||.|||||.|||||||||.|||
Sbjct 1020  GCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGCTACCAAAGCCTTTCGCAGAGGGACCACTGGCCACCAGGA  1093

Query 1553  TTGTTCCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATATTGATATCAGTAAATGCCATTAT  1626
            .||||||.|||.|||||||.||||||||.|.|||.|||||.||||||||.|||||.|||||.|||||||||||.
Sbjct 1094  CTGTTCCCACTCACATGAACGACCAGAACCGAGAGGAGCCTTCCAGATACATTGACATCAGCAAATGCCATTAC  1167

Query 1627  TTAGTGGATTTGGACACCATGAGAGAAACACCCCGGGAGCCAAAATATTCATCCAATAAAGAAGAATGGATCAG  1700
            ||||||||||||||.|||||||||||||||||.|||||||||||.||.||||||.|.|.||||||.|||.||||
Sbjct 1168  TTAGTGGATTTGGATACCATGAGAGAAACACCTCGGGAGCCAAACTACTCATCCCACAGAGAAGAGTGGGTCAG  1241

Query 1701  CTTGGCCTATAGACCATTCCTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGT  1774
            |.||||..|.|||||||||||.|||||.|||||.|||||.|||.||||.||||||||||||||.||||||||||
Sbjct 1242  CCTGGCTCACAGACCATTCCTGGATGCGTCTAGGTCTTCCAAGTTGCTTCGGGCATTCTATGTTCCCTTCCTGT  1315

Query 1775  CAGATCAGTATACAGTGTACGTAAACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGT  1848
            ||||||||||.||.|||||.||.||||||||||||||.||.||.|||||||||||||..|.|||||||||||||
Sbjct 1316  CAGATCAGTACACGGTGTATGTGAACTACACCATCCTGAAGCCTCGGAAAGCAAAGCCGAGCAGGAAGAAAAGT  1389

Query 1849  GGAGGT  1854
            ||||||
Sbjct 1390  GGAGGT  1395

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