Nucleotide Global Alignment

Description

Query:
TRCN0000474722
Subject:
XR_001747976.1
Aligned Length:
2818
Identities:
1802
Gaps:
994

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTGCCCCCGGGAGGGTCTTAGCTGTGGCGCGCGGGGCTCAGTCCGGCCTGGCCTCACCGCGGGAGGCCCGAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCCCTCTTCAGCTAGGTCCTATTGGTCTTCCTGGGCGGGTCAGCATTCAGTCTTCGCCCACCTTAGATCCCTCC  148

Query    1  --------------ATGGCTAGTCGAGGG------------GCTC----GGCAGCGCCTGAAGGGCAGCGGGGC  44
                          .||.||  |.|||.|            ||||    |.||| ||||  ||   ||.|||..
Sbjct  149  ACTGCGCTGTAAAACTGCCT--TGGAGTGCGGATCTGTGATGCTCCTGGGCCAG-GCCT--AG---AGTGGGCA  214

Query   45  CAG---CAGTGGG-GA----------------------------TACGGC------------------------  62
            |||   |.||||| ||                            ||||||                        
Sbjct  215  CAGCCTCTGTGGGAGATGTAGACAGGATCAAAGAGTATACCTTTTACGGCTGTTCCTCACAGCTCCTTTTATTC  288

Query   63  -CCC-------------------------------------------------------------GGCTGCGG-  73
             |||                                                             ||||||.| 
Sbjct  289  TCCCTCAAGTCCCGACCCTTTACTGGGCCCATCCAACCCGCCATCACCTCTTCCCAAACCCTGGAGGCTGCAGG  362

Query   74  --ACAAGCTGC-----GGGAGCTG-------CTGG-------GCAGCCGA-------------GAGGC------  107
              |.|| ||||     ||||||||       .|||       |.||.|.|             .||||      
Sbjct  363  TTAGAA-CTGCATTAAGGGAGCTGTCAACATATGGAATTGGAGTAGGCTATGTACCTTGCACCTAGGCTTCTAT  435

Query  108  ----------GGGCG----------GC--------GC----------------------------GGAG-----  120
                      |||.|          ||        ||                            ||||     
Sbjct  436  CTGAACATAAGGGGGAATGAATAAAGCCATCAAAAGCAATGACCTTGTTAAGAAAAGAAAGAAAAGGAGAATGA  509

Query  121  CACC-----GGAC--CGAGTTATCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCA  187
            ||.|     ||.|  |.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  510  CAGCTTTGTGGCCTTCAAGTTATCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCA  583

Query  188  AGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTCCTGAGCAACATCTCTGACTGTGATGAAACATTCAACTAC  261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  584  AGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTCCTGAGCAACATCTCTGACTGTGATGAAACATTCAACTAC  657

Query  262  TGGGAGCCA----ACACACTACCTCATCTATGGGGAAGGGTTTCAGACTTGGGAATATTCCCCAGCATATGCCA  331
            |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  658  TGGGAGCCAGTAGACACACTACCTCATCTATGGGGAAGGGTTTCAGACTTGGGAATATTCCCCAGCATATGCCA  731

Query  332  TTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACAAACTAATAAG  405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  732  TTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACAAACTAATAAG  805

Query  406  ATTCTTGTGTTTTACTTTTTGCGATGTCTTCTGGCTTTTGTGAGCTGTATTTGTGAACTTTACTTTTACAAGGC  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  806  ATTCTTGTGTTTTACTTTTTGCGATGTCTTCTGGCTTTTGTGAGCTGTATTTGTGAACTTTACTTTTACAAGGC  879

Query  480  TGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT  553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  880  TGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTT  953

Query  554  GCTCATCATCAGCATTCCTTCCTAGTAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATG  627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  954  GCTCATCATCAGCATTCCTTCCTAGTAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATG  1027

Query  628  GACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGG  701
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028  GACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGG  1101

Query  702  TTTACCCATTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGCCC  775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102  TTTACCCATTGCCTTTGATTTGCTGGTCATGAAACACAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGCCC  1175

Query  776  TCATACTATTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAAC  849
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176  TCATACTATTTCTGGTGCCTGTGGTGGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAAC  1249

Query  850  ATTGTTTTGTATAATGTCTTTACTCCTCATGGACCTGATCTTTATGGTACAGAACCCTGGTATTTCTATTTAAT  923
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250  ATTGTTTTGTATAATGTCTTTACTCCTCATGGACCTGATCTTTATGGTACAGAACCCTGGTATTTCTATTTAAT  1323

Query  924  TAATGGATTTCTGAATTTCAATGTAGCCTTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAAT  997
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324  TAATGGATTTCTGAATTTCAATGTAGCCTTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAAT  1397

Query  998  ACCTGCTGCAGAGATTTCATGTTCAGAATTTAGGCCACCCGTATTGGCTTACCTTGGCTCCAATGTATATTTGG  1071
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398  ACCTGCTGCAGAGATTTCATGTTCAGAATTTAGGCCACCCGTATTGGCTTACCTTGGCTCCAATGTATATTTGG  1471

Query 1072  TTTATAATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATTTCTTTTCCCTGTGTATCCACTTATATGTCTCTG  1145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472  TTTATAATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATTTCTTTTCCCTGTGTATCCACTTATATGTCTCTG  1545

Query 1146  TGGCGCTGTGGCTCTCTCTGCACTTCAGCACAGTTTTCTGTACTTCCAGAAATGTTACCACTTTGTGTTTCAAC  1219
            |||||||||||||||||||||||||                     ||||||||||||||||||||||||||||
Sbjct 1546  TGGCGCTGTGGCTCTCTCTGCACTT---------------------CAGAAATGTTACCACTTTGTGTTTCAAC  1598

Query 1220  GATATCGCCTGGAGCACTATACTGTGACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTG  1293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1599  GATATCGCCTGGAGCACTATACTGTGACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTG  1672

Query 1294  TCATTTTCTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAAT  1367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1673  TCATTTTCTCGCTCTGTGGCACTGTTCAGAGGATATCACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAAT  1746

Query 1368  TGCTACAGACCCAACCATCCACACTGTCCCAGAAGGCAGACCTGTGAATGTCTGTGTGGGAAAAGAGTGGTATC  1441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1747  TGCTACAGACCCAACCATCCACACTGTCCCAGAAGGCAGACCTGTGAATGTCTGTGTGGGAAAAGAGTGGTATC  1820

Query 1442  GATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGTTA  1515
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1821  GATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCAGCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGTTA  1894

Query 1516  CCAAAACCTTTTGCAGAAGGACCTCTGGCCACCCGGATTGTTCCTACTGACATGAATGACCAGAATCTAGAAGA  1589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1895  CCAAAACCTTTTGCAGAAGGACCTCTGGCCACCCGGATTGTTCCTACTGACATGAATGACCAGAATCTAGAAGA  1968

Query 1590  GCCATCCAGATATATTGATATCAGTAAATGCCATTATTTAGTGGATTTGGACACCATGAGAGAAACACCCCGGG  1663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1969  GCCATCCAGATATATTGATATCAGTAAATGCCATTATTTAGTGGATTTGGACACCATGAGAGAAACACCCCGGG  2042

Query 1664  AGCCAAAATATTCATCCAATAAAGAAGAATGGATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCTAGATCT  1737
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2043  AGCCAAAATATTCATCCAATAAAGAAGAATGGATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCTAGATCT  2116

Query 1738  TCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCCT  1811
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2117  TCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCCT  2190

Query 1812  CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAGGT-------------------------------  1854
            |||||||||||||||||||||||||||||||||||||||||..                               
Sbjct 2191  CAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAGACCGGAGAAGAGCAGAACCAACTTACAGGAAGA  2264

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2265  ATTGAAAATCCTGGTACTGGATGGCTGTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAA  2338

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2339  GCCTCTCTTAGGCCATATGGGCTTCTCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCTTCTTATTGAAATCC  2412

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2413  TCATGCTGAAAATGAACACAGCCTAGTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGACTAAGCTTCTTT  2486

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2487  AAAGCACTTCACAGGACTAGGACCCTGTCCTGGAGCTATCTCAGGAAAAAGGTGATCTAGCTAACAGGTAGCTA  2560

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2561  GAGTTGAACACCACTGCTCTGGATAAAGACTGAGAGACTAACAATCACACCAAAAAATCAAAGGTAATTAAACA  2634

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2635  GGCAACATATTTGGTGTCCTTTTCTAATTGTGACTCCTGGTTACCCAGGCCTTCATCTAGGCCTCTTCCCCACC  2708

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2709  ACAGACCTATTTCTCTGTCTACTCCAGCCCATCAAACCTTACCTGCCCTCTCTCCCATTCCCTCTGGGCCCTGC  2782

Query 1855  ------  1854
                  
Sbjct 2783  TTTCTG  2788

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