Nucleotide Global Alignment

Description

Query:
TRCN0000474722
Subject:
XR_001747980.1
Aligned Length:
2148
Identities:
1799
Gaps:
349

Alignment

Query    1  --------------------------------------------------------------------ATGGCT  6
                                                                                ||||||
Sbjct    1  AGCCAAAGCTATGTCTGCGCGCTCACCGACTTCATAGGGTGCCGAATTCTTTTTTCCCCAGGCTTGCCATGGCT  74

Query    7  AGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCCCGGCTGCGGACAAGCT  80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCCCGGCTGCGGACAAGCT  148

Query   81  GCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTGGGAACAAAGCAGGAC  154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTGGGAACAAAGCAGGAC  222

Query  155  AAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTCCTGAGC  228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTCCTGAGC  296

Query  229  AACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCA----ACACACTACCTCATCTATGGGGAAGGGT  298
            ||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||
Sbjct  297  AACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCAGTAGACACACTACCTCATCTATGGGGAAGGGT  370

Query  299  TTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCAGCT  372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCAGCT  444

Query  373  GCATTTCATGCAAGAATTCTACAAACTAATAAGATTCTTGTGTTTTACTTTTTGCGATGTCTTCTGGCTTTTGT  446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCATTTCATGCAAGAATTCTACAAACTAATAAGATTCTTGTGTTTTACTTTTTGCGATGTCTTCTGGCTTTTGT  518

Query  447  GAGCTGTATTTGTGAACTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGC  520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAGCTGTATTTGTGAACTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGATGC  592

Query  521  TAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTCCTAGTAGCTTCTGTATGTAC  594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTCCTAGTAGCTTCTGTATGTAC  666

Query  595  ACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGC  668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGGGC  740

Query  669  TATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACCCATTGCCTTTGATTTGCTGGTCATGAAACACAGGT  742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACCCATTGCCTTTGATTTGCTGGTCATGAAACACAGGT  814

Query  743  GGAAGAGTTTCTTTCATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGCCTGTGGTGGTCATTGACAGCTAC  816
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGAAGAGTTTCTTTCATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGCCTGTGGTGGTCATTGACAGCTAC  888

Query  817  TATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTCATGGACCTGATCT  890
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTCATGGACCTGATCT  962

Query  891  TTATGGTACAGAACCCTGGTATTTCTATTTAATTAATGGATTTCTGAATTTCAATGTAGCCTTTGCTTTGGCTC  964
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TTATGGTACAGAACCCTGGTATTTCTATTTAATTAATGGATTTCTGAATTTCAATGTAGCCTTTGCTTTGGCTC  1036

Query  965  TCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAGATTTCATGTTCAGAATTTAGGCCACCCG  1038
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAGATTTCATGTTCAGAATTTAGGCCACCCG  1110

Query 1039  TATTGGCTTACCTTGGCTCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATT  1112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TATTGGCTTACCTTGGCTCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTCACAAAGAGGAGAGATT  1184

Query 1113  TCTTTTCCCTGTGTATCCACTTATATGTCTCTGTGGCGCTGTGGCTCTCTCTGCACTTCAGCACAGTTTTCTGT  1186
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
Sbjct 1185  TCTTTTCCCTGTGTATCCACTTATATGTCTCTGTGGCGCTGTGGCTCTCTCTGCACTT----------------  1242

Query 1187  ACTTCCAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGAATTGGCTG  1260
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1243  -----CAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGAATTGGCTG  1311

Query 1261  GCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACTGTTCAGAGGATATCACGG  1334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312  GCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACTGTTCAGAGGATATCACGG  1385

Query 1335  GCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACTGTCCCAGAAGGCAGAC  1408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1386  GCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACTGTCCCAGAAGGCAGAC  1459

Query 1409  CTGTGAATGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCAGCTT  1482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1460  CTGTGAATGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCAGCTT  1533

Query 1483  CAGTTCATTCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTTTGCAGAAGGACCTCTGGCCACCCGGATTGT  1556
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1534  CAGTTCATTCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTTTGCAGAAGGACCTCTGGCCACCCGGATTGT  1607

Query 1557  TCCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATATTGATATCAGTAAATGCCATTATTTAG  1630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1608  TCCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATATTGATATCAGTAAATGCCATTATTTAG  1681

Query 1631  TGGATTTGGACACCATGAGAGAAACACCCCGGGAGCCAAAATATTCATCCAATAAAGAAGAATGGATCAGCTTG  1704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1682  TGGATTTGGACACCATGAGAGAAACACCCCGGGAGCCAAAATATTCATCCAATAAAGAAGAATGGATCAGCTTG  1755

Query 1705  GCCTATAGACCATTCCTTGATGCTTC------------------------------------------------  1730
            ||||||||||||||||||||||||||                                                
Sbjct 1756  GCCTATAGACCATTCCTTGATGCTTCTAGTTTTGAAGGCTGGAAGACCAAGATCACGATGCCAGTATAGTCAAG  1829

Query 1731  --------------------------------------------------------------------------  1730
                                                                                      
Sbjct 1830  TTCTGGTAAAGGCCATCTTTCTGGCTGCAGACAGCTGACTTGTATCCTCACATGGCTGCAAGAAGACAAGCTAG  1903

Query 1731  --------------------------------------------------------------------------  1730
                                                                                      
Sbjct 1904  CTCTCTAGCCTCTTCTTATAAGGACATTAATCCCATTGTTGAGTGCTCCACTCTTTTGACCTAATTCCCTTCCA  1977

Query 1731  --------------------------TAGATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGA  1778
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1978  AAGGCCCACCTCCAAATACCATCACATAGATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCAGA  2051

Query 1779  TCAGTATACAGTGTACGTAAACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGGAG  1852
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct 2052  TCAGTATACAGTGTACGTAAACTACACCATCCTCAAACCCCG--------------------------------  2093

Query 1853  GT  1854
              
Sbjct 2094  --  2093

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