Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_006519417.1
Aligned Length:
5049
Identities:
854
Gaps:
4131

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGACACTGGTAGTGCCAAAAGGAAAAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CTATCCTGATTATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GCCTGATGATGATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACTTTGTCATGATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GGCAAGAAGGATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCAT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  CAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TTATCGGCCAAATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  GGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  AAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGT  3922

Query    1  -----------------------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCT  45
                                         |||||||||||.||||||||.|||||||||.||||.|||||||||
Sbjct 3923  TAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCT  3996

Query   46  CAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTC  104
            ||.||.|||||.||||||||||.||||.||||||||||||||||.||||||||               ||||||
Sbjct 3997  CAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTC  4070

Query  105  TACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCC  178
            |||||||||||||||||||||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..
Sbjct 4071  TACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTT  4144

Query  179  TGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTG  252
            |||||||||||||.|||||.|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.|||
Sbjct 4145  TGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTG  4218

Query  253  GTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA------------------------  302
            ||||||||||||||||||||.|||||.|||||||||||||||||||||||                        
Sbjct 4219  GTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGA  4292

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4293  GCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGG  4366

Query  303  -------------------------------------------------------------------AGGCATG  309
                                                                               |||||||
Sbjct 4367  CTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATG  4440

Query  310  ATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCA  383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441  ATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCA  4514

Query  384  GCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCAC  457
            |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 4515  GCCACTTCACCCTGGGGGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCAC  4588

Query  458  CGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAG  531
            |||||||||||||.||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 4589  CGGGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAG  4662

Query  532  GTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGT  605
            ||.|||||||||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||.||||||||
Sbjct 4663  GTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGT  4736

Query  606  CATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCT  679
            ||||||||||||||||||.|||||||||||.||||||||||||||||||||..|||||||.|||||||||||||
Sbjct 4737  CATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCT  4810

Query  680  ACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGA  753
            ||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.||.||..|||||||||||
Sbjct 4811  ACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGA  4884

Query  754  AGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCA  827
            |||||.||.|||||||||||.|||||||||||||||||||||||.|||||||||||.|||||.||||||||.||
Sbjct 4885  AGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACA  4958

Query  828  CACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCAT  901
            ||||||||||||||||||||||||||||||.||.|||||.|||||.||.|||||.||||||||.||.||.||||
Sbjct 4959  CACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCAT  5032

Query  902  ACAACCTAGAAAATGTT  918
            |||||||||||||||||
Sbjct 5033  ACAACCTAGAAAATGTT  5049

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