Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_006519418.3
Aligned Length:
5080
Identities:
784
Gaps:
4208

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GACTGCATCAAATTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACCCCACTAGCAAGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGTATGGATCAGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GAGCATCACTTCCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACCAAGGGCAGCTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATTAAAATGCCCATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGAGTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTCTAAAACTGCAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGCATGATCTCCTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGGTCTCAGGAGGCTATCCAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GATTATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGGTGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGGTATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GATGATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GACTCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTAGTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GACATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CATGATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAAGAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CTTAGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ATGTTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AGGATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TGAACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CAGCTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCAC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  ATATAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CCAAATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGTACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ACTTTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CTGTGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TGTGTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  ATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GAGCAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCG  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTC  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  ATCCAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  ACCTGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAAC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  TGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  AGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  CCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGG  4070

Query    1  ----------------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTC  52
                                  |||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|
Sbjct 4071  AGGAGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGC  4144

Query   53  AGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCA  111
            ||||.||||||||||.||||.||||||||||||||||.||||||||               |||||||||||||
Sbjct 4145  AGACACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCA  4218

Query  112  AAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAG  185
            ||||||||||||||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||
Sbjct 4219  AAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAG  4292

Query  186  CAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGA  259
            ||||||.|||||.|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.||||||||||
Sbjct 4293  CAGTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGA  4366

Query  260  CAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGAAG-GCATGATGGGTGGCTATCCGCCAGGCCT  332
            |||||||||||||.|||||.||||||||||||||||||||||||| ||     |||..||||     .||    
Sbjct 4367  CAGAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGC-----GGGCAGCTA-----AAG----  4426

Query  333  TCCACCTTTGCAGGGC-CCAGTTGATGGCCTTGTTAGCATGGGCAGCA-------TGCAGCC----ACTTCACC  394
                   ||||.|.|| .|||..||       |..|||  |.||||||       .||||||    .||||.||
Sbjct 4427  -------TTGCTGAGCAGCAGGAGA-------GAGAGC--GAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCC  4484

Query  395  C----------------TGGGGG----------------GCCTCCACC-CCACC-------ATCTTCCGCCAGG  428
            |                ||||||                |||.||||| .||||       ||..||...|||.
Sbjct 4485  CCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGC  4558

Query  429  TGTGCCTGGCCTCCCGG--GCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCC  500
            .||   ||.|  .||.|  |||           |||||||||||.||||||||.|||||.||||||||||||||
Sbjct 4559  AGT---TGAC--ACCTGTTGCA-----------GGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGGACTCC  4616

Query  501  AGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCAT  574
            ||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||||
Sbjct 4617  AGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACCTCCAT  4690

Query  575  ATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCA  648
            ||||.||.||.|||||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||||||
Sbjct 4691  ATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCCCACCA  4764

Query  649  AAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCAT  722
            ||||||||..|||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||
Sbjct 4765  AAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAACAGCAT  4838

Query  723  TAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTAC  796
            ||||||||||||.||.||..||||||||||||||||.||.|||||||||||.||||||||||||||||||||||
Sbjct 4839  TAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCGCCTAC  4912

Query  797  CCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATG  870
            |.|||||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||.|||
Sbjct 4913  CTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATTTAATG  4986

Query  871  CTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            ||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 4987  CTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5034

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