Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_006519419.2
Aligned Length:
5031
Identities:
854
Gaps:
4113

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGTTCCAAGAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGTGCCTACACCAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCATGAACTCTATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCCAAAGCGGAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAAACTTAAAATGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGGCCTACTATAAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AATGAGTTTGTTCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGCTGACGGCTCTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATCCATCAGGACGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATAATTAAGGAACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AATGGCCAAAGATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATGCCAATTCGATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTTCGAATAAGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCTATCCAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAAC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGAT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCAT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  ACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTAT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  AGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  ACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATG  3922

Query    1  -----------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTG  63
                       |||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|||||.||||||
Sbjct 3923  ATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTG  3996

Query   64  GCCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCCAA  122
            ||||.||||.||||||||||||||||.||||||||               ||||||||||||||||||||||||
Sbjct 3997  GCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAA  4070

Query  123  AGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGA  196
            |||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||||||||.||||
Sbjct 4071  AGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGA  4144

Query  197  GGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGA  270
            |.|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.|||||||||||||||||||||
Sbjct 4145  GAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGA  4218

Query  271  AATCTTGAGACAGCCAAGAAAGCAGAATATGA------------------------------------------  302
            ||.|||||.|||||||||||||||||||||||                                          
Sbjct 4219  AACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCG  4292

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4293  AGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGC  4366

Query  303  -------------------------------------------------AGGCATGATGGGTGGCTATCCGCCA  327
                                                             |||||||||||||||||||||||||
Sbjct 4367  CACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCA  4440

Query  328  GGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGG  401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441  GGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGG  4514

Query  402  GCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAG  475
            |||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||
Sbjct 4515  GCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAG  4588

Query  476  GAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCT  549
            ||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||
Sbjct 4589  GAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCT  4662

Query  550  CCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAAC  623
            |||||||||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||||
Sbjct 4663  CCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAAC  4736

Query  624  ACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAG  697
            .|||||||||||.||||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||||
Sbjct 4737  GCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAG  4810

Query  698  GACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTG  771
            ||||||||||.||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.|||||||||
Sbjct 4811  GACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTG  4884

Query  772  TCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGC  845
            ||.|||||||||||||||||||||||.|||||||||||.|||||.||||||||.||||||||||||||||||||
Sbjct 4885  TCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGC  4958

Query  846  CCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            ||||||||||||.||.|||||.|||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 4959  CCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5031

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