Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_006519427.3
Aligned Length:
4965
Identities:
700
Gaps:
4203

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GACTGCATCAAATTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACCCCACTAGCAAGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGTATGGATCAGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GAGCATCACTTCCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACCAAGGGCAGCTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATTAAAATGCCCATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGAGTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTCTAAAACTGCAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGCATGATCTCCTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGTAAAAAGAACATAAGAAAACAGCG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  CAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGAT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCA  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  TGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATG  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  AAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTG  3996

Query    1  ---------------------------------------------------ATGGGAGAAGAAGATAGTGAGGT  23
                                                               |||||||||||.||||||||.||
Sbjct 3997  CTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGT  4070

Query   24  CATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCC  97
            |||||||.||||.|||||||||||.||.|||||.||||||||||.||||.||||||||||||||||.|||||||
Sbjct 4071  CATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCC  4144

Query   98  CACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGC  171
            ||||||||||||||||||||||||||||||||||||||||||||.|.||.|||||.||||||||||||||||||
Sbjct 4145  CACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGC  4218

Query  172  TACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAG  245
            |||||..|||||||||||||.|||||.|||||||||||.|||||.|||||||||||||||||.|||||||||||
Sbjct 4219  TACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAG  4292

Query  246  CCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGAAGGCATGATGGGTGGCT  319
            |.|.|||||||||||||||||||||||.|||||.||||||||||||||||||||||||                
Sbjct 4293  CAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAA----------------  4350

Query  320  ATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCAC  393
                                                                                      
Sbjct 4351  --------------------------------------------------------------------------  4350

Query  394  CCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGAT  467
                                                                              ||||||||
Sbjct 4351  ------------------------------------------------------------------GGTGTGAT  4358

Query  468  GAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTT  541
            |||.||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.|||||||
Sbjct 4359  GAATCAAGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTT  4432

Query  542  TGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAG  615
            ||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||
Sbjct 4433  TGGGACCTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAG  4506

Query  616  CCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATA  689
            ||||||||.|||||||||||.||||||||||||||||||||..|||||||.|||||||||||||||||||||||
Sbjct 4507  CCAACAACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATA  4580

Query  690  CATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACG  763
            ||||||||||||||||||.||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.|
Sbjct 4581  CATTGAAGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATG  4654

Query  764  TCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATG  837
            ||||||||||.|||||||||||||||||||||||.|||||||||||.|||||.||||||||.||||||||||||
Sbjct 4655  TCCATTTGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATG  4728

Query  838  GCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGA  911
            ||||||||||||||||||||.||.|||||.|||||.||.|||||.||||||||.||.||.||||||||||||||
Sbjct 4729  GCAGATGCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGA  4802

Query  912  AAATGTT  918
            |||||||
Sbjct 4803  AAATGTT  4809

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