Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017006752.1
Aligned Length:
5092
Identities:
846
Gaps:
4220

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGACTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATAATACCATCCGAGACTATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTTAACAATGCAAAGTCCTATTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAGTACTTTTTTCTCCACATTACCAGTCTTCTCCAGCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAACTGCCTTCTAAAGTGCAATA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCCAGATTATTATGCAATAATTAAGGAGCCTATAGATCTCAAGACCATTGCCCAGAGGATACAGAATGGAAGCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACAAAAGTATTCATGCAATGGCCAAAGATATAGATCTCCTCGCAAAAAATGCCAAAACTTATAATGAGCCTGGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCTCAAGTATTCAAGGATGCAAATTCAATTAAAAAAATATTTTATATGAAAAAGGCTGAAATTGAACATCATGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AATGGCTAAGTCAAGTCTTCGAATGAGGACTCCATCCAACTTGGCTGCAGCCAGACTGACAGGTCCTTCACACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTAAAGGCAGCCTTGGTGAAGAGAGAAATCCCACTAGCAAGTATTACCGTAATAAAAGAGCAGTACAAGGAGGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CGTTTATCAGCAATTACAATGGCACTTCAATATGGCTCAGAAAGTGAAGAAGATGCTGCTTTAGCTGCTGCACG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTATGAAGAGGGAGAGTCAGAAGCAGAAAGCATCACTTCCTTTATGGATGTTTCAAATCCTTTTTATCAGCTTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATGACACAGTTAGGAGTTGTCGGAATAACCAAGGGCAGCTAATAGCTGAACCTTTTTACCATTTGCCTTCAAAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAAAAATACCCTGATTATTACCAGCAAATTAAAATGCCCATATCACTACAACAGATCCGAACAAAACTGAAGAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGCTATAATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGCCCAATTCAGCCATCTACAAGCGAGTTCTAAAATTGCAGCAAGTTATGCAGGCAAAGAAGAAAGAGCTTGCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGGAGAGACGATATCGAGGACGGAGACAGCATGATCTCTTCAGCCACCTCTGATACTGGTAGTGCCAAAAGAAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAGGAACACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGTAAAAAGAACATAAGAAAGCAGCGAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGAAAATCTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGTGACCTATTTATG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTTAAACCATCCAAAAAGGACTATCCTGATTATTATAAAATCATCTTGGAGCCAATGGACTTGAAAATAATTGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GCATAACATCCGCAATGACAAATATGCTGGTGAAGAGGGAATGATAGAAGACATGAAGCTGATGTTCCGGAATG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCAGGCACTATAATGAGGAGGGCTCCCAGGTTTATAATGATGCACATATCCTGGAGAAGTTACTCAAGGAGAAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGGAAAGAGCTGGGCCCACTGCCTGATGATGATGACATGGCTTCTCCCAAACTCAAGCTGAGTAGGAAGAGTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CATTTCTCCTAAAAAATCAAAATACATGACTCCAATGCAGCAGAAACTAAATGAGGTCTATGAAGCTGTAAAGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACTATACTGATAAGAGGGGTCGCCGCCTCAGTGCCATATTTCTGAGGCTTCCCTCTAGATCTGAGTTGCCTGAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TACTATCTGACTATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCCAACAAGTACCAAGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TATTGACTCTATGGTTGAGGACTTTGTCATGATGTTTAATAATGCCTGTACATACAATGAGCCGGAGTCTTTGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TCTACAAAGATGCTCTTGTTCTACACAAAGTCCTGCTTGAAACACGCAGAGACCTGGAGGGAGATGAGGACTCT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CATGTCCCAAATGTGACTTTGCTGATTCAAGAGCTTATCCACAATCTTTTTGTGTCAGTCATGAGTCATCAGGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TGATGAGGGAAGATGCTACAGCGATTCTTTAGCAGAAATTCCTGCTGTGGATCCCAACTTTCCTAACAAACCAC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCCTTACATTTGACATAATTAGGAAGAATGTTGAAAATAATCGCTACCGTCGGCTTGATTTATTTCAAGAGCAT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ATGTTTGAAGTATTGGAACGAGCAAGAAGGATGAATCGGACAGATTCAGAAATATATGAAGATGCAGTAGAACT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TCAGCAGTTTTTTATTAAAATTCGTGATGAACTCTGCAAAAATGGAGAGATTCTTCTTTCACCGGCACTCAGCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATACCACAAAACATTTGCATAATGATGTGGAGAAAGAGAGAAAGGAAAAATTGCCAAAAGAAATAGAGGAAGAT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAACTAAAACGAGAAGAAGAAAAAAGAGAAGCTGAAAAGAGTGAAGATTCCTCTGGTGCTGCAGGCCTCTCAGG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CTTACATCGCACATACAGCCAGGACTGTAGCTTTAAAAACAGCATGTACCATGTTGGAGATTACGTCTATGTGG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AACCTGCAGAGGCCAACCTACAACCACATATCGTCTGTATTGAAAGACTGTGGGAGGATTCAGCTGGTGAAAAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TGGTTGTATGGCTGTTGGTTTTACCGACCAAATGAAACATTCCACCTGGCTACACGAAAATTTCTAGAAAAAGA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGTTTTTAAGAGTGACTATTACAACAAAGTTCCAGTTAGTAAAATTCTAGGCAAGTGTGTGGTCATGTTTGTCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AGGAATACTTTAAGTTATGCCCAGAAAACTTCCGAGATGAGGATGTTTTTGTCTGTGAATCACGGTATTCTGCC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  AAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGCTCAGTCAGGTTTGTCCCTCGGGATGT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GCCTCTGCCTGTGGTTCGCGTGGCCTCTGTATTTGCAAATGCAGATAAAGGTGATGATGAGAAGAATACAGACA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  ACTCAGAGGACAGTCGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTCCCTGTGGAAATGTCC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  AATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTACAATGACATGTGGCTGAAGGTTGGCGACTGTGT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CTTCATCAAGTCCCATGGCCTGGTGCGTCCTCGTGTGGGCAGAATTGAAAAAGTATGGGTTCGAGATGGAGCTG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CATATTTTTATGGCCCCATCTTCATTCACCCAGAAGAAACAGAGCATGAGCCCACAAAAATGTTCTACAAAAAA  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GAAGTATTTCTGAGTAATCTGGAAGAAACCTGCCCCATGACATGTATTCTCGGAAAGTGTGCTGTGTTGTCATT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTACAATG  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  AGAGCGACAAGCAGATGAAGAAATTCAAAGGATTGAAGAGGTTTTCACTCTCTGCTAAAGTGGTAGATGATGAA  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  ATTTACTACTTCAGAAAACCAATTGTTCCTCAGAAGGAGCCATCACCTTTGCTGGAAAAGAAGATCCAGTTGCT  4070

Query    1  -------------------------------------------------ATGGGAGAAGAAGATAGTGAGGTCA  25
                                                             |||||||||||||||||||||||||
Sbjct 4071  AGAAGCTAAATTTGCCGAGTTAGAAGGTGGAGATGATGATATTGAAGAGATGGGAGAAGAAGATAGTGAGGTCA  4144

Query   26  TTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCCA  99
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145  TTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCCA  4218

Query  100  CAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTA  173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219  CAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTA  4292

Query  174  CATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCC  247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293  CATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCC  4366

Query  248  GCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGAAG-GCATGATGGGTGGCTA  320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     |||..||||
Sbjct 4367  GCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGAAGAGC-----GGGCAGCTA  4435

Query  321  TCCGCCAGGCCTTCCACCTTTGCAGGGC-CCAGTTGATGGCCTTGTTAGCATGGGCAGCA-------TGCAGCC  386
                 .||           ||||.|.|| .|||..||       |..|||  |.||||||       .||||||
Sbjct 4436  -----AAG-----------TTGCTGAGCAGCAGGAGA-------GAGAGC--GAGCAGCACAGCAACAGCAGCC  4484

Query  387  ----ACTTCACCC----------------TGGGGG----------------GCCTCCACC-CCACC-------A  416
                .||||.|||                ||||||                |||.||||| .||||       |
Sbjct 4485  GAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGA  4558

Query  417  TCTTCCGCCAGGTGTGCCTGGCCTCCCGG--GCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTAT  488
            |..||...|||..||   ||.|  .||.|  |||           |||||||||||||||||||||||||||||
Sbjct 4559  TGCTCAATCAGCAGT---TGAC--ACCTGTTGCA-----------GGTGTGATGAACCAAGGAGTGGCCCCTAT  4616

Query  489  GGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGG  562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4617  GGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGG  4690

Query  563  CACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTA  636
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4691  CACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTA  4764

Query  637  GCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGA  710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4765  GCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGA  4838

Query  711  GTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGG  784
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4839  GTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGG  4912

Query  785  AGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTT  858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4913  AGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTT  4986

Query  859  CGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4987  CGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  5046

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