Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017316139.1
Aligned Length:
5187
Identities:
854
Gaps:
4269

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGTTGGATTCCATGGGTTCCAAGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGGAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGCATCAAATTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAAACC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCACTAGCAAGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TATGGATCAGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CATCACTTCCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAGGGCAGCTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAAATGCCCATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TAAAACTGCAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATGATCTCCTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCTCAGGAGGCTATCCAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGAC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  ACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATC  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGG  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  GTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  CAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGG  4070

Query    1  -------------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGA  55
                               |||||||||||.||||||||.|||||||||.||||.|||||||||||.||.||||
Sbjct 4071  AGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGA  4144

Query   56  CCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAAG  114
            |.||||||||||.||||.||||||||||||||||.||||||||               ||||||||||||||||
Sbjct 4145  CACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAG  4218

Query  115  TCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAG  188
            |||||||||||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..||||||||||
Sbjct 4219  TCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAG  4292

Query  189  TGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAG  262
            |||.|||||.|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.|||||||||||||
Sbjct 4293  TGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAG  4366

Query  263  AATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA----------------------------------  302
            ||||||||||.|||||.|||||||||||||||||||||||                                  
Sbjct 4367  AATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAG  4440

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4441  AGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGG  4514

Query  303  ---------------------------------------------------------AGGCATGATGGGTGGCT  319
                                                                     |||||||||||||||||
Sbjct 4515  GGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCT  4588

Query  320  ATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCAC  393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589  ATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCAC  4662

Query  394  CCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGAT  467
            |||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 4663  CCTGGGGGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGAT  4736

Query  468  GAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTT  541
            |||.||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.|||||||
Sbjct 4737  GAATCAAGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTT  4810

Query  542  TGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAG  615
            ||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||
Sbjct 4811  TGGGACCTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAG  4884

Query  616  CCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATA  689
            ||||||||.|||||||||||.||||||||||||||||||||..|||||||.|||||||||||||||||||||||
Sbjct 4885  CCAACAACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATA  4958

Query  690  CATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACG  763
            ||||||||||||||||||.||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.|
Sbjct 4959  CATTGAAGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATG  5032

Query  764  TCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATG  837
            ||||||||||.|||||||||||||||||||||||.|||||||||||.|||||.||||||||.||||||||||||
Sbjct 5033  TCCATTTGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATG  5106

Query  838  GCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGA  911
            ||||||||||||||||||||.||.|||||.|||||.||.|||||.||||||||.||.||.||||||||||||||
Sbjct 5107  GCAGATGCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGA  5180

Query  912  AAATGTT  918
            |||||||
Sbjct 5181  AAATGTT  5187

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