Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017316142.1
Aligned Length:
5178
Identities:
854
Gaps:
4260

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAGAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAGGCCCAAGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTATAACACCATC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAGAAATCAACC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGGAAGAGTATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAGCCAGATTCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGGAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTTCTCCAGGTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGGCTCATCAGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACCTATAGATCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATATAGATCTTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATTAAAAAAATA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGGACTGCATCAAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAAACCCCACTAGCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCTATCCAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATAT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAAT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  AAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGG  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  AGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  GGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAA  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  CCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGA  4070

Query    1  ----------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGG  64
                      |||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|||||.|||||||
Sbjct 4071  TATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGG  4144

Query   65  CCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCCAAA  123
            |||.||||.||||||||||||||||.||||||||               |||||||||||||||||||||||||
Sbjct 4145  CCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAA  4218

Query  124  GGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAG  197
            ||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||||||||.|||||
Sbjct 4219  GGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAG  4292

Query  198  GGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAA  271
            .|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.||||||||||||||||||||||
Sbjct 4293  AGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAA  4366

Query  272  ATCTTGAGACAGCCAAGAAAGCAGAATATGA-------------------------------------------  302
            |.|||||.|||||||||||||||||||||||                                           
Sbjct 4367  ACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGA  4440

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4441  GCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCC  4514

Query  303  ------------------------------------------------AGGCATGATGGGTGGCTATCCGCCAG  328
                                                            ||||||||||||||||||||||||||
Sbjct 4515  ACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAG  4588

Query  329  GCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGG  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589  GCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGG  4662

Query  403  CCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGG  476
            ||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||
Sbjct 4663  CCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGG  4736

Query  477  AGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTC  550
            |||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||
Sbjct 4737  AGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTC  4810

Query  551  CAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACA  624
            ||||||||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||||.
Sbjct 4811  CAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACG  4884

Query  625  CCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGG  698
            |||||||||||.||||||||||||||||||||..|||||||.||||||||||||||||||||||||||||||||
Sbjct 4885  CCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGG  4958

Query  699  ACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGT  772
            |||||||||.||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.||||||||||
Sbjct 4959  ACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGT  5032

Query  773  CGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCC  846
            |.|||||||||||||||||||||||.|||||||||||.|||||.||||||||.|||||||||||||||||||||
Sbjct 5033  CCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCC  5106

Query  847  CTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            |||||||||||.||.|||||.|||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 5107  CTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5178

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