Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017316145.1
Aligned Length:
5142
Identities:
854
Gaps:
4224

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGTTGGATTCCATGGGTTCCAAGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGGAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGCATCAAATTTGGCTGCAGCCAGGCTGACAGGTCCTTCGCACAATAAAAGCAGCCTTGGTGAAGAAAGAAACC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCACTAGCAAGTATTACCGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TATGGATCAGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CATCACTTCCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAGGGCAGCTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAAATGCCCATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TAAAACTGCAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATGATCTCCTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGTAAAAAGAACATAAGAAAACAGCGAAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGAT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAAT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  ATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  ATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  AAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  GAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTA  3996

Query    1  ------------------------------------------------ATGGGAGAAGAAGATAGTGAGGTCAT  26
                                                            |||||||||||.||||||||.|||||
Sbjct 3997  GAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCAT  4070

Query   27  TGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC--  98
            ||||.||||.|||||||||||.||.|||||.||||||||||.||||.||||||||||||||||.||||||||  
Sbjct 4071  TGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCAC  4144

Query   99  -------------ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATC  159
                         |||||||||||||||||||||||||||||||||||||||||||.|.||.|||||.||||||
Sbjct 4145  AGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATC  4218

Query  160  AACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTT  233
            |||||||||||||||||..|||||||||||||.|||||.|||||||||||.|||||.|||||||||||||||||
Sbjct 4219  AACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTT  4292

Query  234  CGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA-----  302
            .||||||||||||.|.|||||||||||||||||||||||.|||||.|||||||||||||||||||||||     
Sbjct 4293  TGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGC  4366

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4367  GGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGA  4440

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4441  GCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTT  4514

Query  303  ------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTG  364
                        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515  GACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTG  4588

Query  365  TTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGC  438
            ||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 4589  TTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGC  4662

Query  439  CTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGG  512
            |||||.||||||||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||||||
Sbjct 4663  CTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGG  4736

Query  513  AAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCAC  586
            ||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||.||.||.|
Sbjct 4737  AAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTC  4810

Query  587  ATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGG  660
            ||||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||..||
Sbjct 4811  ATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGG  4884

Query  661  CTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGA  734
            |||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||
Sbjct 4885  CTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGA  4958

Query  735  TCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGC  808
            .||.||..||||||||||||||||.||.|||||||||||.|||||||||||||||||||||||.||||||||||
Sbjct 4959  CCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGC  5032

Query  809  TGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACC  882
            |.|||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||.|||||.||.|||||.
Sbjct 5033  TCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACT  5106

Query  883  CTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            ||||||||.||.||.|||||||||||||||||||||
Sbjct 5107  CTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5142

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