Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017316149.1
Aligned Length:
5091
Identities:
854
Gaps:
4173

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGTTGGATTCCATGGGTTCCAAGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGTAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAGAGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGACGTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGAACC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTCAAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCATGCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTTCTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGTAAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  ACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCAT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  CTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  AGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  GGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  TGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGT  3922

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |||
Sbjct 3923  TAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATG  3996

Query    4  GGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGA  77
            ||||||||.||||||||.|||||||||.||||.|||||||||||.||.|||||.||||||||||.||||.||||
Sbjct 3997  GGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGA  4070

Query   78  CCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGA  136
            ||||||||||||.||||||||               ||||||||||||||||||||||||||||||||||||||
Sbjct 4071  CCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGA  4144

Query  137  AGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAG  210
            |||||.|.||.|||||.|||||||||||||||||||||||..|||||||||||||.|||||.|||||||||||.
Sbjct 4145  AGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAA  4218

Query  211  GCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGC  284
            |||||.|||||||||||||||||.||||||||||||.|.|||||||||||||||||||||||.|||||.|||||
Sbjct 4219  GCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGC  4292

Query  285  CAAGAAAGCAGAATATGA--------------------------------------------------------  302
            ||||||||||||||||||                                                        
Sbjct 4293  CAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAAC  4366

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4367  AGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCA  4440

Query  303  -----------------------------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTT  341
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct 4441  ATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTT  4514

Query  342  GCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACC  415
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 4515  GCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTCACC  4588

Query  416  ATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATG  489
            ||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||.|||
Sbjct 4589  ATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCCATG  4662

Query  490  GTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGC  563
            |||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||
Sbjct 4663  GTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGC  4736

Query  564  ACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAG  637
            |||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||||.|||||||||||.|
Sbjct 4737  ACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGG  4810

Query  638  CTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAG  711
            |||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||||||||||||||.||.
Sbjct 4811  CTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAA  4884

Query  712  TCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGA  785
            |||||||||||||||||||||||.||.||..||||||||||||||||.||.|||||||||||.|||||||||||
Sbjct 4885  TCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGA  4958

Query  786  GAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTC  859
            ||||||||||||.|||||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||.|
Sbjct 4959  GAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTAC  5032

Query  860  GAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            |.|||||.|||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 5033  GGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5091

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