Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017316151.1
Aligned Length:
5085
Identities:
854
Gaps:
4167

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAGGCCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTATAACACC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAGAAATCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGGAAGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAGCCAGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTTCTCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGGCTCATC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACCTATAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATATAGATC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATTAAAAAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGTAATAAAAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAGAGGACGCTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGACGTTTCCAAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGAACCTTTCTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTCAACAGATCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTTGAAAAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCATGCAGGCAAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTTCTGACACTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGTAAAAAGAAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGCCAATGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAACTTAAAT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  ATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACCTACAAT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAATATATG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTACACGAA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  ATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGAT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGAT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  AGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  AATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAAT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  GTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAA  3922

Query    1  -----------------------------------------------------------------ATGGGAGAA  9
                                                                             |||||||||
Sbjct 3923  AGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAA  3996

Query   10  GAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCAT  83
            ||.||||||||.|||||||||.||||.|||||||||||.||.|||||.||||||||||.||||.||||||||||
Sbjct 3997  GAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCAT  4070

Query   84  GCCCTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAG  142
            ||||||.||||||||               |||||||||||||||||||||||||||||||||||||||||||.
Sbjct 4071  GCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAA  4144

Query  143  GCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAA  216
            |.||.|||||.|||||||||||||||||||||||..|||||||||||||.|||||.|||||||||||.|||||.
Sbjct 4145  GTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAG  4218

Query  217  CACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAA  290
            |||||||||||||||||.||||||||||||.|.|||||||||||||||||||||||.|||||.|||||||||||
Sbjct 4219  CACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAA  4292

Query  291  AGCAGAATATGA--------------------------------------------------------------  302
            ||||||||||||                                                              
Sbjct 4293  AGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGC  4366

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4367  CGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGG  4440

Query  303  -----------------------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGG  347
                                         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441  ATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGG  4514

Query  348  CCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTC  421
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 4515  CCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTCACCATCTTC  4588

Query  422  CGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGG  495
            ||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||.|||||||||
Sbjct 4589  CGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGG  4662

Query  496  ACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACC  569
            |||||||||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||||||
Sbjct 4663  ACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACC  4736

Query  570  TCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCC  643
            |||||||||.||.||.|||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct 4737  TCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCC  4810

Query  644  CACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAAC  717
            |||||||||||||..|||||||.|||||||||||||||||||||||||||||||||||||||||.||.||||||
Sbjct 4811  CACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAAC  4884

Query  718  AGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCG  791
            |||||||||||||||||.||.||..||||||||||||||||.||.|||||||||||.|||||||||||||||||
Sbjct 4885  AGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCG  4958

Query  792  CCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATT  865
            ||||||.|||||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||.||.||||
Sbjct 4959  CCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATT  5032

Query  866  TGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            |.|||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 5033  TAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5085

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