Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017316153.1
Aligned Length:
5070
Identities:
854
Gaps:
4152

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAGGCCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTATAACACC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAGAAATCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGGAAGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAGCCAGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTTCTCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGGCTCATC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACCTATAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATATAGATC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATTAAAAAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGTAATAAAAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAGAGGACGCTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGACGTTTCCAAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGAACCTTTCTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTCAACAGATCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTTGAAAAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCATGCAGGCAAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTTCTGACACTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGTAAAAAGAAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGCCAATGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAACTTAAAT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  ATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACCTACAAT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAATATATG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTACACGAA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  ATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGAT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGAT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  AGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  AATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAAT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  GTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAA  3922

Query    1  -----------------------------------------------------------------ATGGGAGAA  9
                                                                             |||||||||
Sbjct 3923  AGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAA  3996

Query   10  GAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCAT  83
            ||.||||||||.|||||||||.||||.|||||||||||.||.|||||.||||||||||.||||.||||||||||
Sbjct 3997  GAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCAT  4070

Query   84  GCCCTACACACCCCCACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAA  157
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.|.||.|||||.||||
Sbjct 4071  GCCCTATACACCCCCACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAA  4144

Query  158  TCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCT  231
            |||||||||||||||||||..|||||||||||||.|||||.|||||||||||.|||||.|||||||||||||||
Sbjct 4145  TCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCT  4218

Query  232  TTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA---  302
            ||.||||||||||||.|.|||||||||||||||||||||||.|||||.|||||||||||||||||||||||   
Sbjct 4219  TTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGA  4292

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4293  GCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCC  4366

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4367  GAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCAG  4440

Query  303  --------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCT  362
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441  TTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCT  4514

Query  363  TGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTG  436
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 4515  TGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTG  4588

Query  437  GCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGT  510
            |||||||.||||||||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||||
Sbjct 4589  GCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGT  4662

Query  511  GGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCC  584
            ||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||.||.||
Sbjct 4663  GGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCC  4736

Query  585  ACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGC  658
            .|||||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||..
Sbjct 4737  TCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAA  4810

Query  659  GGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGG  732
            |||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||
Sbjct 4811  GGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGG  4884

Query  733  GATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTG  806
            ||.||.||..||||||||||||||||.||.|||||||||||.|||||||||||||||||||||||.||||||||
Sbjct 4885  GACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTG  4958

Query  807  GCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACA  880
            |||.|||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||.|||||.||.||||
Sbjct 4959  GCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACA  5032

Query  881  CCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            |.||||||||.||.||.|||||||||||||||||||||
Sbjct 5033  CTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5070

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