Nucleotide Global Alignment

Description

Query:
TRCN0000475263
Subject:
XM_017316155.1
Aligned Length:
5040
Identities:
854
Gaps:
4122

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAGGCCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTATAACACC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAGAAATCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGGAAGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAGCCAGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTTCTCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGGCTCATC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACCTATAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATATAGATC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATTAAAAAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGTAATAAAAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAGAGGACGCTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGACGTTTCCAAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGAACCTTTCTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTCAACAGATCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTTGAAAAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCATGCAGGCAAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTTCTGACACTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTAGTGCCAAAAGGAAAAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TAGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GAAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GCTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACAT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  ATAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AAATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAAC  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TTTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GTGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TGTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAAT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TTTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GCAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CTCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCAT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CCAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGAC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CTGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GGTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  TCAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAG  3922

Query    1  --------------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAG  54
                                |||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|||
Sbjct 3923  GAGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAG  3996

Query   55  ACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAA  113
            ||.||||||||||.||||.||||||||||||||||.||||||||               |||||||||||||||
Sbjct 3997  ACACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAA  4070

Query  114  GTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCA  187
            ||||||||||||||||||||||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||||
Sbjct 4071  GTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCA  4144

Query  188  GTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACA  261
            ||||.|||||.|||||||||||.|||||.|||||||||||||||||.||||||||||||.|.||||||||||||
Sbjct 4145  GTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACA  4218

Query  262  GAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA---------------------------------  302
            |||||||||||.|||||.|||||||||||||||||||||||                                 
Sbjct 4219  GAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGA  4292

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4293  GAGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGG  4366

Query  303  ----------------------------------------------------------AGGCATGATGGGTGGC  318
                                                                      ||||||||||||||||
Sbjct 4367  GGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGC  4440

Query  319  TATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCA  392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441  TATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCA  4514

Query  393  CCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGA  466
            ||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 4515  CCCTGGGGGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGA  4588

Query  467  TGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTT  540
            ||||.||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||||.||||||
Sbjct 4589  TGAATCAAGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTT  4662

Query  541  TTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCA  614
            |||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||.|||||||||||||||||
Sbjct 4663  TTGGGACCTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCA  4736

Query  615  GCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAAT  688
            |||||||||.|||||||||||.||||||||||||||||||||..|||||||.||||||||||||||||||||||
Sbjct 4737  GCCAACAACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAAT  4810

Query  689  ACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGAC  762
            |||||||||||||||||||.||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.
Sbjct 4811  ACATTGAAGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGAT  4884

Query  763  GTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCAT  836
            |||||||||||.|||||||||||||||||||||||.|||||||||||.|||||.||||||||.|||||||||||
Sbjct 4885  GTCCATTTGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCAT  4958

Query  837  GGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAG  910
            |||||||||||||||||||||.||.|||||.|||||.||.|||||.||||||||.||.||.|||||||||||||
Sbjct 4959  GGCAGATGCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAG  5032

Query  911  AAAATGTT  918
            ||||||||
Sbjct 5033  AAAATGTT  5040

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