Nucleotide Global Alignment

Description

Query:
TRCN0000475450
Subject:
XM_011247295.1
Aligned Length:
1776
Identities:
1168
Gaps:
516

Alignment

Query    1  ATGAGGGTGCTTTGTGCCTTCCCTGAAGCCATGCCCTCCAGCAACTCCCGCCCCCCCGCGTGCCTAGCCCCGGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGCTCTCTACTTGGCTCTGTTGCTCCATCTCTCCCTTTCCTCCCAGGCTGGAGACAGGAGACCCTTGCCTGTAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACAGAGCTGCAGGTTTGAAGGAAAAGACCCTGATTCTACTTGATGTGAGCACCAAGAACCCAGTCAGGACAGTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AATGAGAACTTCCTCTCTCTGCAGCTGGATCCGTCCATCATTCATGATGGCTGGCTCGATTTCCTAAGCTCCAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GCGCTTGGTGACCCTGGCCCGGGGACTTTCGCCCGCCTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCTGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGTTCCAGAACCTGAGGAACCCGGCGAAAAGCCGCGGGGGCCCGGGCCCGGATTACTATCTCAAAAACTATGAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GATGACATTGTTCGAAGTGATGTTGCCTTAGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTAT  518
                                                                                    ||
Sbjct    1  ------------------------------------------------------------------------AT  2

Query  519  GCTGGAGCTCCAAAGGGAGAAGGCAGCTCAGATGCATCTGGTTCTTCTAAAGGAGCAATTCTCCAATACTTACA  592
            ||||||||||||.||.|||||||||.|.||||||||||||||||||||.||||||||||.||||||||||||||
Sbjct    3  GCTGGAGCTCCAGAGAGAGAAGGCATCGCAGATGCATCTGGTTCTTCTGAAGGAGCAATACTCCAATACTTACA  76

Query  593  GTAATCTCATATTAACAGCCAGGTCTCTAGACAAACTTTATAACTTTGCTGATTGCTCTGGACTCCACCTGATA  666
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   77  GTAACCTCATATTAACAGCCAGGTCTCTAGACAAACTTTATAACTTTGCTGATTGCTCTGGACTCCACCTGATA  150

Query  667  TTTGCTCTAAATGCACTGCGTCGTAATCCCAATAACTCCTGGAACAGTTCTAGTGCCCTGAGTCTGTTGAAGTA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  151  TTTGCTCTAAATGCACTGCGTCGTAATCCCAATAACTCCTGGAACAGTTCTAGTGCCCTGAGCCTGTTGAAGTA  224

Query  741  CAGCGCCAGCAAAAAGTACAACATTTCTTGGGAACTGGGTAATGAGCCAAATAACTATCGGACCATGCATGGCC  814
            |||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||
Sbjct  225  CAGTGCCAGCAAAAAGTACAACATTTCTTGGGAACTGGGTAATGAGCCAAATAACTATCGGAGCATCCATGGCC  298

Query  815  GGGCAGTAAATGGCAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGCCTGTTGCAGCCCATCCGGATTTAT  888
            |||||||||||||.|||||||||||||||||||||||||||||||||||||||.|.||.|||||||||.||||.
Sbjct  299  GGGCAGTAAATGGTAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGCCTGCTCCAACCCATCCGGGTTTAC  372

Query  889  TCCAGAGCCAGCTTATATGGCCCTAATATTGGGCGGCCGAGGAAGAATGTCATCGCCCTCCTAGATGGATTCAT  962
            ||||||||||||.|.||.|||||.||.||.||.|||||.||||||||.|||||.||.|||||||||||||||||
Sbjct  373  TCCAGAGCCAGCCTGTACGGCCCCAACATCGGACGGCCCAGGAAGAACGTCATTGCTCTCCTAGATGGATTCAT  446

Query  963  GAAGGTGGCAGGAAGTACAGTAGATGCAGTTACCTGGCAACATTGCTACATTGATGGCCGGGTGGTCAAGGTGA  1036
            |||||||||||||||.|||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  447  GAAGGTGGCAGGAAGCACAGTGGATGCGGTTACCTGGCAACATTGCTACATTGATGGCCGGGTGGTCAAGGTGA  520

Query 1037  TGGACTTCCTGAAAACTCGCCTGTTAGACACACTCTCTGACCAGATTAGGAAAATTCAGAAAGTGGTTAATACA  1110
            |||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.||.|||
Sbjct  521  TGGACTTCCTGAAAACTCGTCTGTTAGATACACTCTCTGACCAGATTAGGAAAATTCAGAAAGTGGTCAACACA  594

Query 1111  TACACTCCAGGAAAGAAGATTTGGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTATCCGA  1184
            ||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||.||
Sbjct  595  TACACTCCAGGAAAGAAGATTTGGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGA  668

Query 1185  TTCCTATGCTGCAGGATTCTTATGGTTGAACACTTTAGGAATGCTGGCCAATCAGGGCATTGATGTCGTGATAC  1258
            ||||||.||||||||||||||||||.|.|||||||||||||||.||||||||||||||||||||||||||||||
Sbjct  669  TTCCTACGCTGCAGGATTCTTATGGCTAAACACTTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGTGATAC  742

Query 1259  GGCACTCATTTTTTGACCATGGATACAATCACCTCGTGGACCAGAATTTTAACCCATTACCAGACTACTGGCTC  1332
            |.||.||||||||.|||||.||||||||.||.||.||||||||||||||||||||||||||||||||.|||||.
Sbjct  743  GACATTCATTTTTCGACCACGGATACAACCATCTGGTGGACCAGAATTTTAACCCATTACCAGACTATTGGCTT  816

Query 1333  TCTCTCCTCTACAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGCATGTGGCTGGGCTCCAGCGGAAGCCACG  1406
            |||||.||.||||||||.|||||.||||||||||||.||||.||||||||.||||||||||||||||||||.||
Sbjct  817  TCTCTGCTTTACAAGCGTCTGATTGGCCCCAAAGTCCTGGCAGTGCATGTAGCTGGGCTCCAGCGGAAGCCTCG  890

Query 1407  GCCTGGCCGAGTGATCCGGGACAAACTAAGGATTTATGCTCACTGCACAAACCACCACAACCACAACTACGTTC  1480
            |||.||..||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||||||||.||.|
Sbjct  891  GCCAGGAAGAGTCATCCGAGACAAACTAAGAATCTATGCTCACTGCACAAACCACCACAACCACAACTATGTCC  964

Query 1481  GTGGGTCCATTACACTTTTTATCATCAACTTGCATCGATCAAGAAAGAAAATCAAGCTGACTGGGACTCTCAGA  1554
            ||||.||.||.||||||||.|||||||||.|.|||||||||||||||||||||||.|||.||||||||||.||.
Sbjct  965  GTGGCTCTATCACACTTTTCATCATCAACCTACATCGATCAAGAAAGAAAATCAAACTGGCTGGGACTCTGAGG  1038

Query 1555  GACAAGCTGGTTCACCAGTACCTGCTGCAGCCCTATGGGCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACTGAA  1628
            ||||||||.||.||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||
Sbjct 1039  GACAAGCTCGTGCACCAGTATCTGCTGCAGCCCTATGGGCAGGAAGGCCTAAAGTCCAAGTCAGTGCAGCTCAA  1112

Query 1629  TGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGA  1702
            ||||||||||||||||||||||||||||||||||||.||||||.|||||||||||||.||.|||||||||||||
Sbjct 1113  TGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTTCCAGAACTGAAGCCCCGCCCGCTGCGGGCCGGCCGGA  1186

Query 1703  CATTGGTCATCCCTCCAGTCACCATGGGCTTTTTTGTGGTCAAGAATGTCAATGCTTTGGCCTGCCGCTACCGA  1776
            |||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.||.|||
Sbjct 1187  CATTGGTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTCAATGCTTTGGCCTGCCGTTATCGA  1260

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