Nucleotide Global Alignment

Description

Query:
TRCN0000475531
Subject:
XR_002958279.1
Aligned Length:
2454
Identities:
1527
Gaps:
927

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGAGTTTCGCTCTGTTTTATGTGTGCTTCCCAGTCCTGTGGTGCTGCTATACCGGGGACGTTGAGTCCCCACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACCTGGAAATTGCGGCCCCTCTTTCTCAACCCAGAGCAAATTGAGACGTCCGGGATTGACTTCTAAAGACTCT  148

Query    1  -----------------------------------------------------ATGGCTCTTTCTCAGGGTCTA  21
                                                                 |||||||||||||||||||||
Sbjct  149  TGGTACCTGAGGAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCGGGGATGGCTCTTTCTCAGGGTCTA  222

Query   22  CTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCT  95
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCT  296

Query   96  ATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATGATGAATA  169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATGATGAATA  370

Query  170  CATTGTCATCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAGAGACAAGCAAGTTATCAC  243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CATTGTCATCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAGAGACAAGCAAGTTATCAC  444

Query  244  ATTGGAGCATTTTGCTCCCAGGAAATTGAGAAAGACATTCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAAC  317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATTGGAGCATTTTGCTCCCAGGAAATTGAGAAAGACATTCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAAC  518

Query  318  AAATGACCATGAAGCACCCATGACAGAAATAAAAAAGTTGACTAGTAGTACAGACCGATATGATCAAAGGCATG  391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAATGACCATGAAGCACCCATGACAGAAATAAAAAAGTTGACTAGTAGTACAGACCGATATGATCAAAGGCATG  592

Query  392  CTGGAAACAAGCCTATTAAAGGTCAGCTTGAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAGAATTCAT  465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGGAAACAAGCCTATTAAAGGTCAGCTTGAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAGAATTCAT  666

Query  466  ACTGGAGAGAAACCTTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAATACATAG  539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACTGGAGAGAAACCTTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAATACATAG  740

Query  540  GATAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCACACCTGG  613
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GATAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCACACCTGG  814

Query  614  CAAAACATACTAGAATTCACAGGGGAGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGATCAAAAA  687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAAAACATACTAGAATTCACAGGGGAGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGATCAAAAA  888

Query  688  GCAACCCTTGCATGTCATCATAGAAGTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAGACCTT  761
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCAACCCTTGCATGTCATCATAGAAGTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAGACCTT  962

Query  762  TAGTCAGACATCACACCTTGTGTACCATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTG  835
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TAGTCAGACATCACACCTTGTGTACCATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTG  1036

Query  836  GCAAGACCTTCGCTCGAAATTCAGTCCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTATAAGTGT  909
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCAAGACCTTCGCTCGAAATTCAGTCCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTATAAGTGT  1110

Query  910  AATGAATGTGGCAAGGTTTTTAAGCAACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAGAGAAACC  983
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AATGAATGTGGCAAGGTTTTTAAGCAACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAGAGAAACC  1184

Query  984  TTACAGATGTGAAGAATGCGACAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATTCATACTG  1057
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TTACAGATGTGAAGAATGCGACAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATTCATACTG  1258

Query 1058  GAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAGAACATCAGAGA  1131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAGAACATCAGAGA  1332

Query 1132  GTTCATACTGGAGAGAGACCTTACACATGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCGTACCTCGCATG  1205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GTTCATACTGGAGAGAGACCTTACACATGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCGTACCTCGCATG  1406

Query 1206  TCATCAAAAACTTCATACTGGAGAGAAACTTTACGAATGTGAAGAATGTGACAAAGTTTACATTCGCAAATCAC  1279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCATCAAAAACTTCATACTGGAGAGAAACTTTACGAATGTGAAGAATGTGACAAAGTTTACATTCGCAAATCAC  1480

Query 1280  ACCTTGAAAGACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGGTGATTGTGGTAAAGCCTTTAAT  1353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ACCTTGAAAGACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGGTGATTGTGGTAAAGCCTTTAAT  1554

Query 1354  TCACCTTCACACCTTATTAGGCATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAA  1427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCACCTTCACACCTTATTAGGCATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAA  1628

Query 1428  GGTCTTTAGTCTGAGGTCACTCCTTGCAGAACATCAGAAAATTCCTTTTGGAGACAATTGTTTCAAGTGCAATG  1501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGTCTTTAGTCTGAGGTCACTCCTTGCAGAACATCAGAAAATTCCTTTTGGAGACAATTGTTTCAAGTGCAATG  1702

Query 1502  AGTATAGCAAACCATCAAGCATTAAT------------------------------------------------  1527
            ||||||||||||||||||||||||||                                                
Sbjct 1703  AGTATAGCAAACCATCAAGCATTAATTGACATCAGAGTCAAATCAGCATTGACCTGAGTTTGAGTTGACTTAAC  1776

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 1777  ATTGATTTCAAGCATTAATCGACATTAAACTGTTTATGTTAAGAGGATTGGGCCAGGCGTGGTGTCTCACACCT  1850

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 1851  GTAATCCCAGCACTTTGAGAGGCCAAGACAGATGGAATCTTGCTCTGTCGCCCACGTTGGAGTGCAGTGATGTG  1924

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 1925  ATCTCGGTTCACTGCAACATTCACCTCCCAGGTTCATGCAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGAC  1998

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 1999  TACAGGATTGATTTCCAGAGACTTATGTTACTTGAGGAAGACACCAAGAAGGCAAAGAAAAGGAGCCAGGGATG  2072

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 2073  GCTCTTCCTCAGGGATACTTGACTTTCAGAGATGTGGCTATAGAGTTCTCTTTGCTGGAGTGGAAACGCCTGGA  2146

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 2147  CCCTGCACAGAACGCTTTATACAGGGCTGTGATGTGGGAGAACTACAGGAACCTGGAGTCTGTGGGTGAGGAAA  2220

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 2221  ATGTTCCTCCAGACATGAAGAATCTGTCCTTGTGTATCTTGGCTTTTCCTGGTTTTGTATTCTCTTTTGTGATT  2294

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 2295  TTGCCCCATACGTGCTTTTGATGTACACAGCTGGGATTCCAGGCACGTGCCACCATGCCCAGCATGTTATTTTG  2368

Query 1528  --------------------------------------------------------------------------  1527
                                                                                      
Sbjct 2369  TATCTTTAGTGGAGATAGGGTTTTGCCATGTTGGCCAGGCTCGTCTCGAACTCCTGACCTCCATACCCACCCGC  2442

Query 1528  ------------  1527
                        
Sbjct 2443  CTCGGCCTCTAA  2454

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