Nucleotide Global Alignment

Description

Query:
TRCN0000476019
Subject:
XM_017007877.1
Aligned Length:
2871
Identities:
1797
Gaps:
1074

Alignment

Query    1  ATGAACTTTGCGGAGAGAGAGGGCTCTAAGAGATACTGCATTCAAACGAAACATGTGGCCATTCTCTGTGCGGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGTGGTGGGTGTAGGATTAATAGTGGGACTTGCCGTGGGCTTGACCAGATCGTGTGACTCCAGCGGGGACGGCG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GGCCGGGCACTGCGCCAGCTCCTTCCCACCTGCCTTCTTCCACGGCCAGCCCCTCAGGTCCTCCTGCCCAGGAC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CAGGACATCTGCCCGGCCAGTGAGGATGAGAGCGGACAGTGGAAAAACTTTCGACTGCCGGACTTCGTCAACCC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGTCCACTACGACCTGCACGTGAAGCCCCTGTTGGAGGAGGACACCTACACGGGCACCGTGAGCATCTCCATCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACCTGAGCGCTCCCACCCGGTACCTGTGGCTGCACCTCCGGGAGACCAGGATCACCCGGCTCCCGGAGCTGAAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AGGCCCTCTGGGGACCAGGTGCAAGTCCGGAGGTGTTTCGAGTACAAAAAGCAGGAGTACGTGGTGGTCGAGGC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GGAGGAAGAGCTTACCCCCAGCAGTGGAGATGGCCTGTATCTCCTGACCATGGAGTTCGCCGGCTGGCTGAACG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  GCTCCCTCGTGGGATTTTATAGAACCACCTACACGGAGAACGGACGAGTCAAGAGCATAGTGGCCACCGATCAT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  GAACCAACAGATGCCAGGAAATCTTTTCCTTGTTTTGATGAGCCCAACAAAAAGGCAACTTATACAATATCTAT  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  CACCCATCCCAAAGAATACGGAGCACTTTCAAATATGCCAGTGGCGAAAGAAGAGTCAGTGGATGATAAATGGA  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  CTCGAACAACTTTTGAGAAGTCTGTCCCCATGAGCACGTACCTGGTGTGCTTTGCTGTACATCAATTTGACTCT  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  GTAAAGAGAATATCAAATAGTGGAAAACCTCTTACAATTTATGTCCAGCCAGAGCAAAAGCACACAGCCGAATA  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  TGCTGCAAACATAACTAAAAGTGTGTTTGATTATTTTGAAGAATACTTTGCTATGAATTATTCTCTTCCTAAAT  1036
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1037  TAGATAAAATCGCTATTCCAGATTTTGGCACTGGTGCCATGGAGAACTGGGGACTCATCACGTACAGAGAAACG  1110
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct    1  --------------------------------------ATGGAGAACTGGGGACTCATCACGTACAGAGAAACG  36

Query 1111  AACCTGCTTTATGACCCTAAGGAATCAGCCTCATCAAACCAACAGAGGGTGGCCACTGTGGTTGCCCATGAACT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   37  AACCTGCTTTATGACCCTAAGGAATCAGCCTCATCAAACCAACAGAGGGTGGCCACTGTGGTTGCCCATGAACT  110

Query 1185  TGTGCATCAGTGGTTTGGAAATATTGTGACCATGGACTGGTGGGAAGACTTGTGGCTAAATGAAGGATTTGCTT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  111  TGTGCATCAGTGGTTTGGAAATATTGTGACCATGGACTGGTGGGAAGACTTGTGGCTAAATGAAGGATTTGCTT  184

Query 1259  CTTTCTTTGAGTTTCTGGGAGTAAACCATGCAGAAACAGACTGGCAAATGCGTGACCAAATGTTACTTGAAGAT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  185  CTTTCTTTGAGTTTCTGGGAGTAAACCATGCAGAAACAGACTGGCAAATGCGTGACCAAATGTTACTTGAAGAT  258

Query 1333  GTATTACCTGTTCAAGAGGATGATTCTTTGATGTCTTCGCATCCAATTATTGTGACTGTGACAACCCCTGATGA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  259  GTATTACCTGTTCAAGAGGATGATTCTTTGATGTCTTCGCATCCAATTATTGTGACTGTGACAACCCCTGATGA  332

Query 1407  AATAACATCTGTTTTTGATGGAATATCCTATAGCAAGGGATCTTCTATTTTGAGAATGCTTGAAGACTGGATAA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  333  AATAACATCTGTTTTTGATGGAATATCCTATAGCAAGGGATCTTCTATTTTGAGAATGCTTGAAGACTGGATAA  406

Query 1481  AACCAGAGAATTTTCAAAAAGGATGTCAGATGTACTTGGAAAAATACCAATTCAAGAATGCAAAAACTTCTGAT  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  407  AACCAGAGAATTTTCAAAAAGGATGTCAGATGTACTTGGAAAAATACCAATTCAAGAATGCAAAAACTTCTGAT  480

Query 1555  TTTTGGGCAGCACTGGAAGAGGCAAGTAGGCTACCAGTGAAAGAAGTAATGGACACCTGGACCAGACAGATGGG  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  481  TTTTGGGCAGCACTGGAAGAGGCAAGTAGGCTACCAGTGAAAGAAGTAATGGACACCTGGACCAGACAGATGGG  554

Query 1629  TTATCCTGTGCTTAACGTGAACGGTGTCAAGAACATCACACAGAAACGCTTTTTGTTGGACCCAAGAGCTAACC  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  555  TTATCCTGTGCTTAACGTGAACGGTGTCAAGAACATCACACAGAAACGCTTTTTGTTGGACCCAAGAGCTAACC  628

Query 1703  CTTCTCAGCCCCCTTCAGATCTTGGTTATACATGGAATATCCCAGTTAAATGGACTGAAGATAATATAACAAGC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  629  CTTCTCAGCCCCCTTCAGATCTTGGTTATACATGGAATATCCCAGTTAAATGGACTGAAGATAATATAACAAGC  702

Query 1777  AGTGTGTTATTTAATAGGTCAGAAAAAGAAGGAATCACTTTGAACTCCTCTAATCCTAGTGGAAATGCTTTTCT  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  703  AGTGTGTTATTTAATAGGTCAGAAAAAGAAGGAATCACTTTGAACTCCTCTAATCCTAGTGGAAATGCTTTTCT  776

Query 1851  CAAAATAAACCCAGATCATATTGGGTTTTATCGTGTAAATTATGAAGTAGCAACTTGGGACTCGATAGCTACAG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  777  CAAAATAAACCCAGATCATATTGGGTTTTATCGTGTAAATTATGAAGTAGCAACTTGGGACTCGATAGCTACAG  850

Query 1925  CGCTCTCCTTGAACCACAAGACATTTTCTTCAGCAGATCGTGCAAGTCTTATTGATGATGCTTTTGCCTTGGCA  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  851  CGCTCTCCTTGAACCACAAGACATTTTCTTCAGCAGATCGTGCAAGTCTTATTGATGATGCTTTTGCCTTGGCA  924

Query 1999  AGAGCTCAACTTCTAGATTATAAGGTGGCTTTGAACTTGACCAAGTATCTCAAAAGGGAAGAGAATTTTTTACC  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  925  AGAGCTCAACTTCTAGATTATAAGGTGGCTTTGAACTTGACCAAGTATCTCAAAAGGGAAGAGAATTTTTTACC  998

Query 2073  ATGGCAGAGAGTAATTTCAGCTGTAACCTACATCATTAGCATGTTTGAAGATGATAAAGAGCTATATCCTATGA  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  999  ATGGCAGAGAGTAATTTCAGCTGTAACCTACATCATTAGCATGTTTGAAGATGATAAAGAGCTATATCCTATGA  1072

Query 2147  TTGAGGAATACTTCCAAGGTCAAGTGAAGCCTATTGCAGATTCTCTGGGATGGAATGATGCTGGAGACCATGTC  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073  TTGAGGAATACTTCCAAGGTCAAGTGAAGCCTATTGCAGATTCTCTGGGATGGAATGATGCTGGAGACCATGTC  1146

Query 2221  ACAAAGTTACTCCGTTCCTCCGTGTTAGGGTTTGCGTGCAAGATGGGAGACAGAGAAGCCTTGAACAATGCTTC  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147  ACAAAGTTACTCCGTTCCTCCGTGTTAGGGTTTGCGTGCAAGATGGGAGACAGAGAAGCCTTGAACAATGCTTC  1220

Query 2295  CTCGTTATTTGAGCAGTGGCTAAATGGGACTGTAAGCCTTCCCGTAAATCTCAGGCTTCTGGTGTATCGGTATG  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221  CTCGTTATTTGAGCAGTGGCTAAATGGGACTGTAAGCCTTCCCGTAAATCTCAGGCTTCTGGTGTATCGGTATG  1294

Query 2369  GGATGCAGAACTCTGGCAATGAGATTTCATGGAACTACACTCTTGAGCAATACCAGAAAACTTCATTAGCTCAA  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295  GGATGCAGAACTCTGGCAATGAGATTTCATGGAACTACACTCTTGAGCAATACCAGAAAACTTCATTAGCTCAA  1368

Query 2443  GAAAAAGAAAAACTGCTGTATGGATTAGCATCAGTGAAGAACGTTACTCTTTTGTCAAGGTATTTGGATTTGCT  2516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369  GAAAAAGAAAAACTGCTGTATGGATTAGCATCAGTGAAGAACGTTACTCTTTTGTCAAGGTATTTGGATTTGCT  1442

Query 2517  CAAGGACACGAACCTTATTAAAACTCAGGATGTGTTTACAGTCATTCGATATATCTCATATAACAGCTATGGGA  2590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443  CAAGGACACGAACCTTATTAAAACTCAGGATGTGTTTACAGTCATTCGATATATCTCATATAACAGCTATGGGA  1516

Query 2591  AGAACATGGCCTGGAATTGGATACAACTCAACTGGGACTATCTAGTCAACAGATATACACTCAATAACAGAAAC  2664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1517  AGAACATGGCCTGGAATTGGATACAACTCAACTGGGACTATCTAGTCAACAGATATACACTCAATAACAGAAAC  1590

Query 2665  CTTGGCCGAATTGTCACAATAGCAGAGCCATTCAACACTGAACTGCAACTGTGGCAGATGGAGAGCTTTTTTGC  2738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1591  CTTGGCCGAATTGTCACAATAGCAGAGCCATTCAACACTGAACTGCAACTGTGGCAGATGGAGAGCTTTTTTGC  1664

Query 2739  AAAATATCCACAAGCTGGAGCAGGAGAAAAACCTAGGGAACAAGTGCTGGAAACAGTGAAAAACAATATAGAGT  2812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1665  AAAATATCCACAAGCTGGAGCAGGAGAAAAACCTAGGGAACAAGTGCTGGAAACAGTGAAAAACAATATAGAGT  1738

Query 2813  GGCTAAAACAACATAGAAACACCATCAGAGAATGGTTTTTTAATTTACTTGAGAGTGGT  2871
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739  GGCTAAAACAACATAGAAACACCATCAGAGAATGGTTTTTTAATTTACTTGAGAGTGGT  1797

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