Nucleotide Global Alignment

Description

Query:
TRCN0000476486
Subject:
NM_001348157.2
Aligned Length:
1499
Identities:
1056
Gaps:
274

Alignment

Query    1  ATGGCTCTTCCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCT  148
                                              ||||||||||||||||||||||||||||||||||.||.||
Sbjct    1  ----------------------------------ATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGGTATCT  40

Query  149  CTTCCAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTG  222
            ||||||||||||..||||||..||||||||||||||.|||||||||||||||||||.|||||||||||||||||
Sbjct   41  CTTCCAAATGCACAATGAAGGAGTTCTCATCAACAGCACAAGGCAATACAGAAGTGATCCACACAGGGACATTG  114

Query  223  CAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTT  296
            ||||.|||||.|.|||||||||||||||||..||.||||||||||||||||||||||||||||.||||||.|||
Sbjct  115  CAAAGACATGAACGTCATCACATTGGAGATTTTTCCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTT  188

Query  297  TCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAATCAAAAAGTTGATGAGTAGTACAG  370
            |||||||||||||.||||||.|||||||||||||||||.||||||||||||||||||.||||||.|||||||||
Sbjct  189  TCAGTGGCAAGAAGATGAAAGAAATGGCCATGAAGCACCCATGACAAAAATCAAAAAATTGATGGGTAGTACAG  262

Query  371  AGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTG  444
            |||.|.|||||||.|||||||||||||||||.|||||||||.||.||||||||||||||||||||||.||||||
Sbjct  263  AGCAATATGATCACAGGCATGCTGGAAACAAGCCTATTAAATATCAGCTTGGATCAAGCTTTCATTCACATCTG  336

Query  445  CCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTC  518
            .|||||.|.|||||||||||.|||.|||||||||||..|||||||||.||||||.|||||||||||||||.|||
Sbjct  337  TCTGAACTCCACATATTTCAGCCCAAAGGGAAAATTAATAATCAAGTGGAGAAGTCTATCAACGATGCTTCCTC  410

Query  519  AGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCC  592
            .||||||.||.|||||.|||||||.||||||||.|||||.|.|||.||||||||.|||.||.|||||||.||..
Sbjct  411  GGTTTCAACAGCCCAAAGAATTTCTTGTAGGCCCAAAACCCATATATCTAATAACTATGGGGATAATTTTCTGA  484

Query  593  AGTCTTCATTACTCACACAAAAACGGGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAA  666
            |.|.|||||||||||||||||.||.||||||||.||..||||||||||||||||||.|||.|||||||||||||
Sbjct  485  ATTATTCATTACTCACACAAAGACAGGAAGTACGCATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAA  558

Query  667  GCCTTTAATGGTAGCTCACTCTTAAAAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGT  740
            |||||||||..||||||||||||||..|||||||||||.||.|||.|||||||.|||||.||||||||||||||
Sbjct  559  GCCTTTAATTATAGCTCACTCTTAAGGAAACATCAGATTATTCATCTAGGAGAGAAACAATATAAATGTGATGT  632

Query  741  ATGCGGCAAGGACTTTCATCAGAAGCGATACCTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTACA  811
            |||.|.|||||.||||..||.||||||||||||||||.||||   |||||||||||||||||||||.|||||||
Sbjct  633  ATGTGACAAGGTCTTTATTCGGAAGCGATACCTTGCACGCCATCGTAGATGTCACACTGGTGAGAAACCTTACA  706

Query  812  AGTGTAATGAGTGTGGCAAGACATTCAGT---------------------------------------------  840
            ||||||||||||||||||||.|.||||||                                             
Sbjct  707  AGTGTAATGAGTGTGGCAAGTCCTTCAGTCAGATGTCATCCCTTACATATCATCATCGACTTCATACTGGAGAG  780

Query  841  ---------------------------------------CACAATTCAGCCCTGTTAGTTCACAAGGC------  869
                                                   |||||||||||||      |||| |||.|      
Sbjct  781  AAACCTTACAAATGTGAAGAATGTGACAAAGCTTTCAGACACAATTCAGCCC------TTCA-AAGACATAGGA  847

Query  870  -AATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCTTGCA  942
             |||||||||||||||||||||..|.|||||||||||.|||||||||...||||.|||..|.|||.||||||||
Sbjct  848  GAATTCATACTGGAGAGAAACCACATAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGAAGTCATACCTTGCA  921

Query  943  CGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATC  1016
            .|.||||.|||..|||||||||||.|||||||||||.|||||||||||||||||||||.|||||||..||||||
Sbjct  922  TGCCATCGTAGCATTCATACTGGAAAGAAACCTTACGAATGTGAAGAATGTGACAAAGCTTTCAGTTTCAAATC  995

Query 1017  ACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCA  1090
            |.||||||||||.|||||||.||.|||.||||||||||||||||||||.|||||.|.|||||.||||.|.||||
Sbjct  996  AAACCTTGAAAGTCATAGGATAACTCATACTGGAGAGAAACCATACAAGTGTAATGATTGTGGCAAGACCTTCA  1069

Query 1091  GACGTGAT-TCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTG-  1162
            |.|.| || |||..|||..||...|||..|..|.||||.||||||||||||||||||||||||.|.||.|||| 
Sbjct 1070  GTCAT-ATGTCAACCCTTACATGCCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGA  1142

Query 1163  -GCAAGACCTT--CG-TTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATACTGGAGAGAAACGTTACAA  1232
             | |||  |||  || ||||||  |||..|||||.||..||||.|...|||||||.|||||||||||..|||||
Sbjct 1143  TG-AAG--CTTTCCGTTTCAAA--TCAAGTCTTGAAAGACATAGGAGAATTCATAATGGAGAGAAACTGTACAA  1211

Query 1233  GTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTAGACTTCATACTGGAGAGA  1306
            .||||||||.|||||||||...||.|.|||..|.|.|..||||.|.||.|||.||||||||||||.||||||||
Sbjct 1212  ATGTAATGAGTGTGGCAAGACCTTCAGTCAGGAGTTATCCCTTACCTGCCATTGTAGACTTCATAGTGGAGAGA  1285

Query 1307  AACCTTACAAGTGTAATGAATGTGGCAAGGTTT----TTAATCGAAAATCAAACCTTGAACGTCATCATAGACT  1376
            ||||||.|||||||...|||||||.|||||.||    ||         |||||                     
Sbjct 1286  AACCTTGCAAGTGTGGAGAATGTGACAAGGCTTACAGTT---------TCAAA---------------------  1329

Query 1377  TCATACTGGAAAGAAATCT  1395
                               
Sbjct 1330  -------------------  1329

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