Nucleotide Global Alignment

Description

Query:
TRCN0000476486
Subject:
NM_001369764.1
Aligned Length:
2165
Identities:
1198
Gaps:
823

Alignment

Query    1  ATGGCTCTTCCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74
            |||||||||||||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTCTTCCTCAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74

Query   75  GGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCT  148
            |||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||||||       
Sbjct   75  GGACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTG-------  141

Query  149  CTTCCAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTG  222
                                               ||.||||||||||||||||.|.|||||||||||||||||
Sbjct  142  -----------------------------------GGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTG  180

Query  223  CAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTT  296
            ||||.|||.|||||||||||||||||||||..||||||||||.|||||||||||||.|||||||.|||...|||
Sbjct  181  CAAAGACAAGCAAGTCATCACATTGGAGATTTTTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTT  254

Query  297  TCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAATCAAAAAGTTGA-TGAGTAGTACA  369
            |||||||.|||||.||||||||||||.|||||.|||||.|||||||.||||||||.|||||| || ||||||||
Sbjct  255  TCAGTGGAAAGAAGATGAAACAAATGACCATGCAGCACCCATGACAGAAATCAAAGAGTTGACTG-GTAGTACA  327

Query  370  GAGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCT  443
            |..|.|||||||||||||||||||||||||||.|.|||||||.||.|||||||||.||||||||||||||||||
Sbjct  328  GGCCAACATGATCAAAGGCATGCTGGAAACAAGCATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCT  401

Query  444  GCCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCT  517
            |||||||.|||||||||||||.||.||||||||||||||||||||||||||||||.||||||||.||||||.||
Sbjct  402  GCCTGAACTGCACATATTTCAGCCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCT  475

Query  518  CAGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTC  591
            ||||||||.||||||||.||||||..||||||||.|||||.|.||||||||||||||||.|.|||||||.||||
Sbjct  476  CAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTC  549

Query  592  CAGTCTTCATTACTCACACAAAAACGGGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAA  665
            ||.||||||||||||||||||||||||.|.|||||||..||||||||||||||||||.|||.||||||||||||
Sbjct  550  CATTCTTCATTACTCACACAAAAACGGAATGTACACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAA  623

Query  666  AGCCTTTAATGGTAGCTCACTCTTAAAAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATG  739
            |.||||||||.||||||||||.|||||||||||||||||||.|||.||||.|||.|||||.|.|||||||||||
Sbjct  624  ATCCTTTAATTGTAGCTCACTTTTAAAAAAACATCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATG  697

Query  740  TATGCGGCAAGGACTTTCATCAGAAGCGATACCTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTAC  810
            |||..|||||||..|||.|||||||||||||||||||||||||   |||||.|||||.||.||||||.||||||
Sbjct  698  TATATGGCAAGGTATTTAATCAGAAGCGATACCTTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTAC  771

Query  811  AAGTGTAATGAGTGTGGCAAGACATTCAGTCACAATTCAGCCCTGTTAGTTCACAAGGC---------------  869
            ||||||||||||||||||||||..||..||||||||.||.||||.||..||||||||||               
Sbjct  772  AAGTGTAATGAGTGTGGCAAGATCTTTGGTCACAATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGA  845

Query  870  --------------------------------------------------------------------------  869
                                                                                      
Sbjct  846  CAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTT  919

Query  870  --------------------------------------------------------------------------  869
                                                                                      
Sbjct  920  ATACTGGAGGGAAACCATACAAATGTAAGGTTTGTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACAT  993

Query  870  -----AATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCT  938
                 ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||.||..||||.|||
Sbjct  994  ACTATAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCT  1067

Query  939  TGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCA  1012
            ||||||.||||.|||..||||||||||||||||||||||..||||||||||||||||.||||||||||||||||
Sbjct 1068  TGCACGCCATCGTAGGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCA  1141

Query 1013  AATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCT  1086
            |||||||.|||||||||||||.|||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1142  AATCACATCTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCT  1215

Query 1087  TT--CAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAG  1158
            ||  ||.|  |.|||||.||||||||.||||||.|.|||||||||||||||||||.|||||||||||||||||.
Sbjct 1216  TTTGCATA--TAATTCATACCTGGCAAAACATAGTATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAA  1287

Query 1159  TGTGGCAAGACCTTCGTTCAAAATTCATCTCTTGTA----ATGCATAAGGTCATTCATACTGGAGAGAAACGTT  1228
            |||||||||...||...||||.|.|||.||||||.|    || ||||  |.| |||||||||.||||||||..|
Sbjct 1288  TGTGGCAAGGTTTTTAATCAACAATCAACTCTTGCACGCCAT-CATA--GAC-TTCATACTGCAGAGAAACCAT  1357

Query 1229  ACAAGTGTAATGAATGTGGCAAGGTTTTTAATCA----CAAATCAAACCTTG----------------------  1276
            ||||.|||.|.|||||||.|||.||||    |||    |||||||.||||||                      
Sbjct 1358  ACAAATGTGAAGAATGTGACAAAGTTT----TCAGGTGCAAATCACACCTTGAAAGACATAGGAGGATTCATAC  1427

Query 1277  -----------------------------------------------------CATG---------TCATCGTA  1288
                                                                 ||||         .||||..|
Sbjct 1428  TGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCATGCCTTACAGAACATCAGA  1501

Query 1289  GACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAA  1362
            ||.|||||||||||||||||||.||||.||||||||||||||||||||||||||.|..||||.|||||||||.|
Sbjct 1502  GAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCAAACCTTGCA  1575

Query 1363  CGTCATCATAGACTTCATACTGGAAAGAAATCT-----------------------------------------  1395
            .|||||||||.|||||||||||.|.|||||.|.                                         
Sbjct 1576  TGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTCGCAAATC  1649

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1650  ACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAACCGTACAAATGTAAGGTTTGTGACAAGGCTTTCC  1723

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1724  GGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGC  1797

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1798  AAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAA  1871

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1872  TGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTATACCATCATAGGCTTCATAGTGGAGAGAAACCTT  1945

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1946  ACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCACACCTTGCACAGCATCAGAGAGTTCATACTGGA  2019

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2020  GAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACT  2093

Query 1396  -------------------  1395
                               
Sbjct 2094  TCATAGTGGAGAGAAACCT  2112

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