Nucleotide Global Alignment

Description

Query:
TRCN0000476486
Subject:
NR_102300.2
Aligned Length:
4776
Identities:
1240
Gaps:
3398

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGTGGATCCCGTGGAATGACGGTCACGCCGCGGCGGGCGGATTGACTTCTAAAGACTGTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGAAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGTTCCGTCTCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGACCCAGTGTCATGAACTTGGGAAGAGGCTGCACTGGGCAGGTCCTGGGAAGGGCTCACACCCCGACATGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGACACGGGGTGAGGGTCCTGTGGTGTCAGTGCTCTTGGGCAGCAGGGATTGTTCAGGGGCCACATCTGGATG  296

Query    1  ------------------------------------------------------------ATGGCTCTTCCTCA  14
                                                                        |||         ||
Sbjct  297  CACTGTCAGCTCACTGTGGACCAGGATTGGAGCAGCTGCCAATGGGAGTCACGTATTAATATG---------CA  361

Query   15  ----------GGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGAC  78
                      |||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  362  CGAAGTACGTGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGAC  435

Query   79  CCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTG-----------  141
            |||||||||||||||.|||||||.|||||||||||||||||||||||||||||.|||||||||           
Sbjct  436  CCTGCTCAGAGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCTGGAGTTTTGGTC  509

Query  142  --------------------------------------------------------------------------  141
                                                                                      
Sbjct  510  TGTCATCCCGGCTAAAGTACAGTGGTGTCATCTCCGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAATTCT  583

Query  142  ---------------------------------GATACCTCTTCCAAATGCATGATGAAGATGTTCTCATCAAC  182
                                             ||||.||||||||||||||||.||||||.|||.||.|||||
Sbjct  584  CCTGCCTCAGCCTTCCAAGTACCTGGGACTACAGATATCTCTTCCAAATGCATGTTGAAGACGTTGTCGTCAAC  657

Query  183  AGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATACTT  256
            |||.||||||||||||||||||.|||||||||||||||||||.|.|||.||||||||||||||||||||...||
Sbjct  658  AGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCACAGACAAGCAAGTCATCACATTGGAGAATTTT  731

Query  257  GCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCATGAA  330
            |.|||||.||||||||||||||.|||||||.|||.|.||||||||||.|||||.||||||||||||||||||.|
Sbjct  732  GTTTCCATGAAATTGAGAAAGACATTCATGGCTTCGAGTTTCAGTGGAAAGAAGATGAAACAAATGGCCATGCA  805

Query  331  GCACTCATGACAAAAATCAAAAAGTT-GATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAAAC  403
            ||||.|||||||.||||||||.|||| |.|| |||||||||..|.|||||||||||||||||||||||||||.|
Sbjct  806  GCACCCATGACAGAAATCAAAGAGTTGGCTG-GTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAGC  878

Query  404  CTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGAAA  477
            .|||||||.||.|||||||||||||||||||||.|||||||||||||..||||||||||||..|.|||||||||
Sbjct  879  GTATTAAAGATCAGCTTGGATCAAGCTTTCATTTGCATCTGCCTGAACCGCACATATTTCAGTCTGAAGGGAAA  952

Query  478  ATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGGCC  551
            |||||||||||||||||||||.||||||||.||||||.||||||||||.||||||||.||||||..||||||||
Sbjct  953  ATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGCC  1026

Query  552  AAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGTAC  625
            .|||||.|.||||||||||||||||.|.|||||||.||||||.|||||||||||||||||||||.|||||||||
Sbjct 1027  CAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAATGGGAAGTAC  1100

Query  626  ACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAACAT  699
            |||..||||||||||||||..||.|||...||||...||||.||||||||.|.|||||||||||||||||||||
Sbjct 1101  ACATGAGAGAAAAATCTTTTGAATGTATACAGAGCTTCAAATCCTTTAATTGCAGCTCACTCTTAAAAAAACAT  1174

Query  700  CAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATACCT  773
            ||||||||.||.||||.|||.|||||.|.|||||||||||||||.|||||||.||||.||||||||||||||||
Sbjct 1175  CAGATAATTCACTTAGAAGAGAAACAATGTAAATGTGATGTATGTGGCAAGGTCTTTAATCAGAAGCGATACCT  1248

Query  774  TGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACATTCAGTCACA  844
            |||.|||||   |||||||||||||||||||||.|||||||||||||||||||||||||||||.||..||||.|
Sbjct 1249  TGCCTGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGGTCATA  1322

Query  845  ATTCAGCCCTGTTAGTTCACAA----------------------------------------------------  866
            |||||.||||.||..|||||||                                                    
Sbjct 1323  ATTCATCCCTCTTCATTCACAAAGCGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGTGACAAAGTT  1396

Query  867  --------------------------------------------------------------------------  866
                                                                                      
Sbjct 1397  TTCAGTCGCAAATCACACCTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTG  1470

Query  867  ------------------------------GGCAA------------TTCATACTGGAGAGAAACCTTACAAGT  898
                                          |||||            ||||.|||||||||||||||||||..|
Sbjct 1471  TGATGAGGCTTTCGCATATAATTCATATCTGGCAAAACATACTATACTTCACACTGGAGAGAAACCTTACACAT  1544

Query  899  GTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAA  972
            ||||||||||||||||.||||||||||.||.|||||.|||||||||.|||||||||.|||||||||||||||||
Sbjct 1545  GTAATGAATGTGGCAAAGTTTTTAATCGACTATCAACCCTTGCACGCCATCATAGACTTCATACTGGAGAGAAA  1618

Query  973  CCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACAT--------------  1032
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||              
Sbjct 1619  CCTTACAAATGTGAAGAGTGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGGATTCATAG  1692

Query 1033  ----------------------------------------------------------------------AGGA  1036
                                                                                  ||||
Sbjct 1693  TGGAGAGAAACCTTACAAATGTGAAGAATGTTGCAAAGTTTTCAGTCGCAAATCAAACCTGGAAAGACACAGGA  1766

Query 1037  GAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTT-CAGACGTGATTCACACCTGGC  1109
            |.|||||.|||||||||||||||||||||||||||||||||||||||||||| |||| |.||||||||||||||
Sbjct 1767  GGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCAGA-GGGATTCACACCTGGC  1839

Query 1110  ACAACATACTG-TAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGTTCAAAAT  1182
            ||||||| |.| .|.||||.||||||||||||||||||||||||||||||||||||||||||||||.|||.|..
Sbjct 1840  ACAACAT-CAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGGTCAGACA  1912

Query 1183  TCATCTCTTGTAATGCAT--AAGGTCATTCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAG---  1251
            |||||.|||.||||.|||  .|||  .||||||||||||||||||.|||||||||||||||.|||||||||   
Sbjct 1913  TCATCGCTTATAATCCATCGTAGG--CTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACC  1984

Query 1252  ----GT-------------TTTTA--------------------------------------------------  1258
                ||             ||.||                                                  
Sbjct 1985  TTCAGTCAGATGTCATCCCTTGTATACCATCATAGGCTTCATAGTGGAGAGAAGCCTTAATAGTGTAATGAGTG  2058

Query 1259  --------------ATCACAAATCAAACCTTGCATGTCATCGTAG--ACTTCATACTGGAGAGAAACCTTACAA  1316
                          |||||||.|| ||||.||.|.|||||  .||  |.|||||||||||||||||||||||||
Sbjct 2059  TGGCAAGACCTTCCATCACAATTC-AACCCTGTAAGTCAT--AAGGCAATTCATACTGGAGAGAAACCTTACAA  2129

Query 1317  GTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAACGTCATCATAGACTTCATACTGGAAAGA  1390
            |..||||||||||||||||||||||||||.||||.|||.|.|||.||.|||.||||||||||||||||||.|||
Sbjct 2130  GCATAATGAATGTGGCAAGGTTTTTAATCAAAAAGCAACCTTTGCACATCACCATAGACTTCATACTGGAGAGA  2203

Query 1391  AATCT---------------------------------------------------------------------  1395
            ||.||                                                                     
Sbjct 2204  AACCTTACAAATGGGAGGAATGTGACAAAAGTTTTCAGTTGTAAATCAAACCTTAAAACACATAAGAAAATTCA  2277

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2278  CATTGAAGAGAAACCATACAGAGGTAAGGTTTGTGACAAGGTTTTTGCATATAATGCATATCTGGCAAAACATA  2351

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2352  CTAGAATTCACACTGGAGAGAAACTCATTATAAGTGTAATGAGTGTGGCAAGACCGTTGGTCAAAATTCACACC  2425

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2426  TTGTAATTAAAAGGTCAAAATTCACACCTTGTAATTCATAGTGGAGAGAAACCTTACAAGCACAATGAATGTGA  2499

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2500  CATGGTTTTTAATCAACAATCACACCTTGCAAGTCATCATAGACTTCATACTGCATAGAAATCTTACAAACGTG  2573

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2574  AACAATGTGACAAAGTTTTCATTCACAAATCCAGCTTCAAATACATAGGAGAATTCACACTGGAGAAAAGCCAT  2647

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2648  AGAAATGTAAGGTTTGTGACAAGGCTTTCGGGAATGATTCACACGTGGCACCCCATACTAGAATTCACACTGGA  2721

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2722  GAGAAACCTTACAAGTGCAATGAGTGTGGCAAACCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCAAT  2795

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2796  CCATGGTATAGGGAAACTTGACTAATGTAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCACATC  2869

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2870  ATTGGAGAATCCACAGTGAAGAGATCTTACAAGTGTAATAAATGTGGCAAATTTTTCAGACATCGTTCATGCCT  2943

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2944  TGCATTTCACTGGTGAACTCATGCTGGAGAGAAACCTTATAAATGTCATGATTGAGGCAAGGTCTTCAGTCAAG  3017

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3018  CTTCATCCTATGCAAAACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAAAGCG  3091

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3092  TTTACTTCACATTCACACCTCATTAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATCAGTG  3165

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3166  TGGAAGGGTCTTCAGTCCAAGGTCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTCAAAT  3239

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3240  GCAGTGAGTATAGCAAACCATCAAGCATTAATTGACATTAGAGTCAAATCAGCCTTGACCTGAGTTTGTTGATT  3313

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3314  TAACATTGATTTCAAGCATTAATTGCCATTAAACTGTTTATGTTAAGAGGATTGCACTGGGGGCCATGGCTCAT  3387

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3388  GCCTGTAATTCCAGCACTTTGAGAGGCAAAGACAGGTAGGTCACTGGAGCTCACGAGTTTGAGAACAGCCTAGC  3461

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3462  CAACAGATGGGAGCTACTTTTCCCAGCCTTTATTTTCTTTTTCTTGTTTTTTTTTTGAGATGGAGTCTTGCTCT  3535

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3536  GTCGCCCAGGTTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAACCTCCTCCTCCCAGGTTCAAGCAATTCTC  3609

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3610  CTGCCTCAGTCTCCCAAGTAGCTGACACTACAGTTGTGTGCCACCACACCTGGGTAATTTTTTGTGTTTTTAGT  3683

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3684  AGAGACTGGGTTTCACCGTGTTAGCCAGAATGGTCTCTATCTTCTGACTTTATGATCCACCCGACTCCACCTCC  3757

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3758  CAAAGTGCTGAGATTACAGGAGTGAGCCACTGTGCCTGGCCTGTTTTTTGTTTCTTTAACAAAAAGTTATAGAG  3831

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3832  ACTTCTATGAGTATTGTACCGAATCTAAATCACAATTGAGTATATAATCATTGAGCGATATTCATTTTTCCAAT  3905

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3906  CAGTATGGGATTTATATCTATTTATACATGTTTTTAATCATTTTGATCAATGTTTATAGATTTCAAGGTACAAA  3979

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3980  CCTCACTTTTTATGTTTATTCCTAAATATTTCTTACTTTAAGTTCTTTAGCAAATGGAATTGGTTTTTAATTTT  4053

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4054  CTTTTAAAATTATTTATTGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTGTTATTCTATTCTGCAAATAA  4127

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4128  ACTGAATGTGTTTGTTAGTTCCAGTTGCATTTTGGCTGACTCTTTGTGATTTTCTTTACAGAAGGTCATGTCAT  4201

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4202  CTACAAACAAATAAAATTTGACTTCTTTCTTTCTGATTTGGATGAGTTTGATTTCTTTTGCTATTTCATTGTTC  4275

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4276  TGGCTAGGACAGCCAGTATTGATTGAATAGAAGGGGTGAGAGCATTCTTGCATCATGTGAGATCCTACAGGAAA  4349

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4350  AGCATTCCGTTTTCCCTGATTGGTTATTTCTGCTGTGGTCATTTCATGGATGGTCTTTGTATTGCTGAGGTAAA  4423

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4424  TTTTCTTCTGTATCTATTTTGTGTGGGATTTCTATGATGACTTGATGTTGACTTTTGTGAAATGCTTTTTCTCC  4497

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4498  ATGTATTGAGATGATGTGGTTTTCATCTTTCATTGTGTTCAAGTGGTATATCACATTGATTTGCTTGACTATGT  4571

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4572  TGAACCATCCTTGCATCCCAGAAATAAGTGGCACTTGCATATCTACAATCCTTTTAATATCCTCTTGAATACAG  4645

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4646  TTCGCTAGTACAAGGGGTCTTCAAGAAGTTCATGAAAAAAATACATATTATGTGAAAATTGCACATGATGTCAC  4719

Query 1396  ----------------------------------------  1395
                                                    
Sbjct 4720  ATTTTCTGCACCAAAATAAACTGGCACAAATCTGTTATAA  4759

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