Nucleotide Global Alignment
Description
- Query:
- TRCN0000476486
- Subject:
- NR_163139.1
- Aligned Length:
- 4934
- Identities:
- 1233
- Gaps:
- 3550
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACCAGGAAGCGGATCCCGTGGAATGACGGTGACGCCGCGGCGGGCGGATTGACTTCTAAAGAATCTTGGTAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGAGGAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGGACTCATCCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCAAGGAAGTCCTCACTGACTCTTTGAGAACTCTATATATGCAAACCCTTTGGGATGGCCACTAAATTTGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACAGAGTATGGTAACGTGGTTGACTGAACCACAGCCATGAAAGTGAGCTTCCAGCTCTTCTGCTGTTGCACCGC 296
Query 1 --------------------ATGG-------------------CTCTTCCTC---------------------- 13
|||| ||..|||||
Sbjct 297 AGTCCACATTGCCAGCATTGATGGAACGGGCATCAGCCTCCATCTTCTCCTCAATGGACGTGATCACTGGGCCA 370
Query 14 -----------AGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGG 76
||||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCATTGCCTGGAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGG 444
Query 77 ACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTG--------- 141
|||||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||||||
Sbjct 445 ACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATTTTCGG 518
Query 142 -------------------------------------------------------------------------- 141
Sbjct 519 TCTGTCACCCAGGCTAAAGTGCAGTGGTGTCACCTCGGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAATT 592
Query 142 -----------------------------------GATACCTCTTCCAAATGCATGATGAAGATGTTCTCATCA 180
||||.|||||||||||||||||||||||..||||..|||
Sbjct 593 CTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGATATCTCTTCCAAATGCATGATGAAGACATTCTTCTCA 666
Query 181 ACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATAC 254
|||||.||||||||||||||||.|.|||||||||||||||||||||.|||.|||||||||||||||||||||..
Sbjct 667 ACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACATTGGAGATTT 740
Query 255 TTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCATG 328
||||||||||.|||||||||||||.|||||||.|||...||||||||||.|||||.||||||||||||.|||||
Sbjct 741 TTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAAAGAAGATGAAACAAATGACCATG 814
Query 329 AAGCACTCATGACAAAAATCAAAAAGTTGA-TGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAA 401
.|||||.|||||||.||||||||.|||||| || |||||||||..|.|||||||||||||||||||||||||||
Sbjct 815 CAGCACCCATGACAGAAATCAAAGAGTTGACTG-GTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAA 887
Query 402 ACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGA 475
.|.|||||||.||.|||||||||.|||||||||||||||||||||||||.|||||||||||||.||.|||||||
Sbjct 888 GCATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTGCACATATTTCAGCCTGAAGGGA 961
Query 476 AAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGG 549
|||||||||||||||||||||||.||||||||.||||||.||||||||||.||||||||.||||||..||||||
Sbjct 962 AAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGG 1035
Query 550 CCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGT 623
||.|||||.|.||||||||||||||||.|.|||||||.||||||.||||||||||||||||||||||||.|.||
Sbjct 1036 CCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAACGGAATGT 1109
Query 624 ACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAAC 697
|||||..||||||||||||||||||.|||.|||||||||||||.||||||||.||||||||||.||||||||||
Sbjct 1110 ACACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTAATTGTAGCTCACTTTTAAAAAAAC 1183
Query 698 ATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATAC 771
|||||||||.|||.||||.|||.|||||.|.||||||||||||||..|||||||..|||.||||||||||||||
Sbjct 1184 ATCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGCAAGGTATTTAATCAGAAGCGATAC 1257
Query 772 CTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACATTCAGTCA 842
||||||||||| |||||.|||||.||.||||||.||||||||||||||||||||||||||||..||..||||
Sbjct 1258 CTTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGATCTTTGGTCA 1331
Query 843 CAATTCAGCCCTGTTAGTTCACAAGGC----------------------------------------------- 869
||||.||.||||.||..||||||||||
Sbjct 1332 CAATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTTATGAATGTGAAGAATGTGACAAAG 1405
Query 870 -------------------------------------------------------------------------- 869
Sbjct 1406 TTTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGAGGGAAACCATACAAATGTAAGGTT 1479
Query 870 -----------------------------------------------AATTCATACTGGAGAGAAACCTTACAA 896
||||||.||||||||||||||||||||
Sbjct 1480 TGTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAATTCACACTGGAGAGAAACCTTACAA 1553
Query 897 GTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGA 970
|||||||||||||||||||||||||||||.||..||||.|||||||||.||||.|||..|||||||||||||||
Sbjct 1554 GTGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCCATCGTAGGCTTCATACTGGAGAGA 1627
Query 971 AACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCAC 1044
|||||||..||||||||||||||||.|||||||||||||||||||||||.|||||||||||||.|||.|||||.
Sbjct 1628 AACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAAGAGGATTCAT 1701
Query 1045 ACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTT--CAGACGTGATTCACACCTGGCACAACAT 1116
|||||||||||||||||||||||||||||||||||||||||||| ||.| |.|||||.||||||||.|||||
Sbjct 1702 ACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATA--TAATTCATACCTGGCAAAACAT 1773
Query 1117 ACTGTAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGTTCAAAATTCATCTCT 1190
|.|.|||||||||||||||||||.|||||||||||||||||.|||||||||...||...||||.|.|||.||||
Sbjct 1774 AGTATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAACTCT 1847
Query 1191 TGTA----ATGCATAAGGTCATTCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAAT 1260
||.| || |||| |.| |||||||||.||||||||..|||||.|||.|.|||||||.|||.|||| |
Sbjct 1848 TGCACGCCAT-CATA--GAC-TTCATACTGCAGAGAAACCATACAAATGTGAAGAATGTGACAAAGTTT----T 1913
Query 1261 CA----CAAATCAAACCTTG------------------------------------------------------ 1276
|| |||||||.||||||
Sbjct 1914 CAGGTGCAAATCACACCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTG 1987
Query 1277 ---------------------CATG---------TCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGT 1320
|||| .||||..|||.|||||||||||||||||||.||||.||||
Sbjct 1988 ACAAGGCTTTCCGGAGTGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGAAACCATACATGTGT 2061
Query 1321 AATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAACGTCATCATAGACTTCATACTGGAAAGAAATC 1394
||||||||||||||||||||||.|..||||.|||||||||.|.|||||||||.|||||||||||.|.|||||.|
Sbjct 2062 AATGAATGTGGCAAGGTTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCATACTGCAGAGAAACC 2135
Query 1395 T------------------------------------------------------------------------- 1395
.
Sbjct 2136 GTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAGGAGGATTCATACTG 2209
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2210 GAGAGAAACCGTACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGGCACAACATCAGAGA 2283
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2284 GTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACATCATCGCTTATAAT 2357
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2358 CCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCAT 2431
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2432 CCCTCGTATACCATCATAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAAT 2505
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2506 CAACAAGCACACCTTGCACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAA 2579
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2580 GACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTGAAAGTGTAATG 2653
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2654 AGTGTGGCAAGACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTAA 2727
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2728 AAGTGTAATGAGTGTGGCAACACCTTCCATCACAATTCAACCCTTGTAAGTCACAAAGCCATTCATACTGGAGA 2801
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2802 GAAACTTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAAAAAACAACCCTTGCACGTCATCATAGAATTC 2875
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2876 ATACTGCAGAGAAACTTTACAAATAGGAAGAATGTGACAAAGTTTTCGGTTGCAAATCAAACCTTGAAACACAT 2949
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2950 AAGAAAATGCATGCTGAAGAGAAACCACACAGATGTAAGGTTTATGACAAGATTTTTGAATATAATTCATACCT 3023
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3024 GGCAAAACATATTAGAATTCAAACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAACACCTTTGGTCAAA 3097
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3098 ATTCATACCTTGTAATTCAAAAGGCAATTCGTATTGGAGAGAAACCCTACAAGTGTAATGAATGTGGCATAGTT 3171
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3172 TTTAATCAACAGTCACACCTTGCAAGTCATCATAGTCTTCATACTGCAGAGAAATCTTACAAATGTGAAGACTG 3245
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3246 TGACAAAGTTGTCAGTCACAAATCACAGCTTGAAAGACAGGAGAATTCATACTGGAGAAAAAACATACAAATGT 3319
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3320 AAGGTTTGTAACAAGGCTTTTGGGAGTGATTCACACCTGGCACACCATACTAGAATTCACACTGGAGAGAAACC 3393
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3394 TTACAAGTGCAATGAGTGTGGCAAAGCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCAATCCATAGTA 3467
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3468 TAGGGAAACTTGACTAATATAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCAAATCATTGGAGA 3541
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3542 ATCCATAATGAGAGATCTTACAAGTGTAATAAATGTGACAGATTTTTCAGATATCGTTCATATATTGCTATTCA 3615
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3616 TCATCGAACTCATGCTGGAGAGAAACCTTATAAATGTCATGATTGTGGCAAGGTCTTCAGTCAAGTTTCATCCT 3689
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3690 ATGCAAAACATAGGAGGATTCATACAGGAGAGAAACTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCAC 3763
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3764 ATTCACACCTCAATAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGTAAGGTC 3837
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3838 TTCAGTCCGAGATCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCCATTAGTA 3911
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3912 TAGCAAGCCATCAAGCATTAATTGACATTACAGTTAAATGAGCACTGACCTGAGTTTGAGTTGACTTAACATTG 3985
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 3986 AGTTTAAGCATTAATTGACATTAAACTGTTTATGTTAAGAGGACTGGGCTGGGCACTGTGGCTCACGCCTGCAA 4059
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4060 TGCCAGCACTTTGAGAGGCCAAGACTGGTAGGTCACTGGAGGTTAAGAGTTTGAGAACAGCCTGGCCAACAGAC 4133
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4134 GGGAGCCACTTTTCCCAGCCTGTGTTTTCATTTCTATTCTTTCTTTCTTTTTTCTTTTTTTTGTTTTTGTTTTT 4207
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4208 GAGATGGAGTCTCTTGCTCTGTCATCCAGGTTGGAGTGCAGTGGCATGATCTTGACTCACTACAACCTCCGCCT 4281
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4282 CCCAGGTTCAAGCGATCCTCCTGCCTCAGTCTCCTGACTAGCTGGGACTACAGGTGCATGCCACCACACCTGGA 4355
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4356 TAATTTTTTGTATTTTTAGTAGAGACTGGGTTTCGCTGTGTTAGCCTGGATGGTCTCGATTTTCTGATCTTATG 4429
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4430 ATTCACCCACCTCTACCTCCCGAAGTGCTGAGATTATGGGCGTGAGCCACCGTGACTGGCCTGTTTTTTGTTTC 4503
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4504 TTTAACAAAAAGTTATGGGGATTTCTATGAGTATTGTGTTGAATCTAAATCACATTCGGTTATATAATCATTGA 4577
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4578 GCAATACTAATTTTTCCAATCAGTATGGATTGTATGTGTATTTATATGTTTTTAATCATTTTGATCAATGTTTG 4651
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4652 TAGATTTCAAGGTACAAACTTCTCACCTTTATATGTTTATTCCTAAATATTTCTTACTTTAAGCTCTTTAGCAA 4725
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4726 ATGGAAGTGGTTTTTAATTTTATTTTAAAATTATTTAATGTTAATGTATGGAAATTCAACTAATTTTTGGTGCT 4799
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 4800 ATTATTCTATTCTGCAAATACACTGAATATGTTTATTAGTTCCAGTTGTATTTTGGTTGACTGTGATTTTCTTC 4873
Query 1396 -------------------------------------------------- 1395
Sbjct 4874 ACAGATCATGTCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGA 4923