Nucleotide Global Alignment

Description

Query:
TRCN0000476486
Subject:
XM_024451686.1
Aligned Length:
2165
Identities:
927
Gaps:
1117

Alignment

Query    1  ATGGCTCTTCCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTTCCAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAATCAAAAAGTTGA-TGAGTAGTACA  369
                                                    ||||||.||||||||.|||||| || ||||||||
Sbjct    1  ----------------------------------------ATGACAGAAATCAAAGAGTTGACTG-GTAGTACA  33

Query  370  GAGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCT  443
            |..|.|||||||||||||||||||||||||||.|.|||||||.||.|||||||||.||||||||||||||||||
Sbjct   34  GGCCAACATGATCAAAGGCATGCTGGAAACAAGCATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCT  107

Query  444  GCCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCT  517
            |||||||.|||||||||||||.||.||||||||||||||||||||||||||||||.||||||||.||||||.||
Sbjct  108  GCCTGAACTGCACATATTTCAGCCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCT  181

Query  518  CAGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTC  591
            ||||||||.||||||||.||||||..||||||||.|||||.|.||||||||||||||||.|.|||||||.||||
Sbjct  182  CAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTC  255

Query  592  CAGTCTTCATTACTCACACAAAAACGGGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAA  665
            ||.||||||||||||||||||||||||.|.|||||||..||||||||||||||||||.|||.||||||||||||
Sbjct  256  CATTCTTCATTACTCACACAAAAACGGAATGTACACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAA  329

Query  666  AGCCTTTAATGGTAGCTCACTCTTAAAAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATG  739
            |.||||||||.||||||||||.|||||||||||||||||||.|||.||||.|||.|||||.|.|||||||||||
Sbjct  330  ATCCTTTAATTGTAGCTCACTTTTAAAAAAACATCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATG  403

Query  740  TATGCGGCAAGGACTTTCATCAGAAGCGATACCTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTAC  810
            |||..|||||||..|||.|||||||||||||||||||||||||   |||||.|||||.||.||||||.||||||
Sbjct  404  TATATGGCAAGGTATTTAATCAGAAGCGATACCTTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTAC  477

Query  811  AAGTGTAATGAGTGTGGCAAGACATTCAGTCACAATTCAGCCCTGTTAGTTCACAAGGC---------------  869
            ||||||||||||||||||||||..||..||||||||.||.||||.||..||||||||||               
Sbjct  478  AAGTGTAATGAGTGTGGCAAGATCTTTGGTCACAATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGA  551

Query  870  --------------------------------------------------------------------------  869
                                                                                      
Sbjct  552  CAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTT  625

Query  870  --------------------------------------------------------------------------  869
                                                                                      
Sbjct  626  ATACTGGAGGGAAACCATACAAATGTAAGGTTTGTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACAT  699

Query  870  -----AATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCT  938
                 ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||.||..||||.|||
Sbjct  700  ACTATAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCT  773

Query  939  TGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCA  1012
            ||||||.||||.|||..||||||||||||||||||||||..||||||||||||||||.||||||||||||||||
Sbjct  774  TGCACGCCATCGTAGGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCA  847

Query 1013  AATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCT  1086
            |||||||.|||||||||||||.|||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  848  AATCACATCTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCT  921

Query 1087  TT--CAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAG  1158
            ||  ||.|  |.|||||.||||||||.||||||.|.|||||||||||||||||||.|||||||||||||||||.
Sbjct  922  TTTGCATA--TAATTCATACCTGGCAAAACATAGTATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAA  993

Query 1159  TGTGGCAAGACCTTCGTTCAAAATTCATCTCTTGTA----ATGCATAAGGTCATTCATACTGGAGAGAAACGTT  1228
            |||||||||...||...||||.|.|||.||||||.|    || ||||  |.| |||||||||.||||||||..|
Sbjct  994  TGTGGCAAGGTTTTTAATCAACAATCAACTCTTGCACGCCAT-CATA--GAC-TTCATACTGCAGAGAAACCAT  1063

Query 1229  ACAAGTGTAATGAATGTGGCAAGGTTTTTAATCA----CAAATCAAACCTTG----------------------  1276
            ||||.|||.|.|||||||.|||.||||    |||    |||||||.||||||                      
Sbjct 1064  ACAAATGTGAAGAATGTGACAAAGTTT----TCAGGTGCAAATCACACCTTGAAAGACATAGGAGGATTCATAC  1133

Query 1277  -----------------------------------------------------CATG---------TCATCGTA  1288
                                                                 ||||         .||||..|
Sbjct 1134  TGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCATGCCTTACAGAACATCAGA  1207

Query 1289  GACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAA  1362
            ||.|||||||||||||||||||.||||.||||||||||||||||||||||||||.|..||||.|||||||||.|
Sbjct 1208  GAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCAAACCTTGCA  1281

Query 1363  CGTCATCATAGACTTCATACTGGAAAGAAATCT-----------------------------------------  1395
            .|||||||||.|||||||||||.|.|||||.|.                                         
Sbjct 1282  TGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTCGCAAATC  1355

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1356  ACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAACCGTACAAATGTAAGGTTTGTGACAAGGCTTTCC  1429

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1430  GGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGC  1503

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1504  AAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAA  1577

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1578  TGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTATACCATCATAGGCTTCATAGTGGAGAGAAACCTT  1651

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1652  ACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCACACCTTGCACAGCATCAGAGAGTTCATACTGGA  1725

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1726  GAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACT  1799

Query 1396  -------------------  1395
                               
Sbjct 1800  TCATAGTGGAGAGAAACCT  1818

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