Nucleotide Global Alignment

Description

Query:
TRCN0000476486
Subject:
XR_935832.3
Aligned Length:
4284
Identities:
1166
Gaps:
2945

Alignment

Query    1  ---------------------ATGGCTCTTCCTCAGGGTCTACTGACATTCAGG-GATGTGGCC----ATAGAA  48
                                 ..||.||       ||||..|.|||     ||| .|.||.|||    ||.||.
Sbjct    1  GAGATTAACGCAAACCCGGAAGCGGATC-------GGGTGGAGTGA-----AGGTCACGTCGCCATGGATTGAT  62

Query   49  TTCT-----CTCAGG--AGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGG  115
            ||||     ||||.|  |.|.|.||||          .|.|||||||           ||||            
Sbjct   63  TTCTAAAGACTCATGTTACGTGAGGAA----------GCAGCTCAGA-----------AGAG------------  103

Query  116  AGAATTATAGGAA----------CCTGG-TCTCCCT-GGATACCTCTTCCAAATGCATGATGAAGATGTTCTCA  177
             |||    |||||          |.||| |||.||| .||||.||||||||||..||||||||||..|.|||..
Sbjct  104  -GAA----AGGAAAGGAGTCAGGCATGGCTCTTCCTCAGATATCTCTTCCAAACACATGATGAAGGAGGTCTTG  172

Query  178  TCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGA  251
            ||||||||.||||||||||.|||||||.|||||||||||||||||||||.||||..||||.|||||||||||||
Sbjct  173  TCAACAGGGCAAGGCAATAGAGAAGTGATCCACACAGGGACATTGCAAAGACATCAAAGTTATCACATTGGAGA  246

Query  252  TACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCC  325
            ...||||||||||||||||||||||||.||||||.||.|||.|||||||||.||||||.||||||.||||||||
Sbjct  247  CTTTTGCTTCCAGGAAATTGAGAAAGAAATTCATAACATTGAGTTTCAGTGTCAAGAAGATGAAAGAAATGGCC  320

Query  326  ATGAAGCACTCATGACAAAAATCAAAAAGTTGA-TGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAA  398
            |||||||||.||.|||||||||.|||||||||| || ||||.|||||.|.|||||||||.||||||||||||||
Sbjct  321  ATGAAGCACCCACGACAAAAATAAAAAAGTTGACTG-GTAGCACAGACCAACATGATCACAGGCATGCTGGAAA  393

Query  399  CAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAG  472
            |||.|||||||||.||.|||||||||||||||||.||||.||||||||||||.|.|||||||||||...|.|||
Sbjct  394  CAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATCTGCCTGAACTCCACATATTTCAGATCAAAG  467

Query  473  GGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGT  546
            |..||||||.|||||||.||||||||.|||.||..|||||||.||||||||||.||||||||.|||||||||||
Sbjct  468  GTGAAATTGCTAATCAACTTGAGAAGTCTACCAGTGATGCTTCCTCAGTTTCAACATCCCAAAGAATTTCCTGT  541

Query  547  AGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGA  620
            |||||..|||..|.||||||||||||.|||.||||||||..|||..|.||||||||||||.|||||||||.|||
Sbjct  542  AGGCCCCAAATCCATATTTCTAATAACTATGGGAATAATCCCCTGAATTCTTCATTACTCCCACAAAAACAGGA  615

Query  621  AGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAA  694
            ||||||||..||||||||||||||||.|.||||||||||||||||||||||||||.|||||||||||||||..|
Sbjct  616  AGTACACATGAGAGAAAAATCTTTCCCATGTAATGAGAGTGGCAAAGCCTTTAATTGTAGCTCACTCTTAAGGA  689

Query  695  AACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGA  768
            ||||.||||||..||||||||||||||||||.|||||||||||||||||.||||||..||||.||||.||||.|
Sbjct  690  AACACCAGATACCCCATTTAGGAGACAAACAATATAAATGTGATGTATGTGGCAAGCTCTTTAATCACAAGCAA  763

Query  769  TACCTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACATTCA-  838
            ||||||||||||||   |||||||||||||||.|||||.||||||||||||||.||||||||.|||.|.|||| 
Sbjct  764  TACCTTGCATGCCATCGTAGATGTCACACTGGAGAGAAACCTTACAAGTGTAAAGAGTGTGGAAAGTCCTTCAG  837

Query  839  --------------------------------------------------------------------------  838
                                                                                      
Sbjct  838  TTACAAGTCATCCCTTACATGCCATCATAGACTTCATACTGGAGTAAAACCTTACAAGTGTAATGAGTGTGGCA  911

Query  839  ---------GTCACAATTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAAT  903
                     ||||.|||||||||||..||.||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  912  AGGTCTTTCGTCAAAATTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAAT  985

Query  904  GAATGTGGCAAGGTTTTTAATCAA--------------------------------------------------  927
            |||||||||||||.||||||||||                                                  
Sbjct  986  GAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGCCATCAAAGACTTCATACTGGAGTGAAACCTTA  1059

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1060  CAAATGTAAGATTTGTGAGAAGGCTTTTGCGTGTCATTCCTATCTGGCAAACCATACTAGAATTCATAGTGGAG  1133

Query  928  --------------------------------------------CAATCAAACCTTGCACGTCATCATAGAGTT  957
                                                        |||||||.|||||||||||||||||.|.||
Sbjct 1134  AGAAAACATACAAGTGTAATGAGTGTGGTAAGGCTTTTAATCATCAATCAAGCCTTGCACGTCATCATATACTT  1207

Query  958  CATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACA  1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||..||||||.|||||
Sbjct 1208  CATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCAGAAATCAACCCTTGAGAGACA  1281

Query 1032  TAGGAGAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCAGACGTG--ATTCACA  1103
            ||.|||||||||.|||||||||||||||||||||||||||||||||||.|..||||||  |||||  |||||||
Sbjct 1282  TAAGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATACAGCTTTC--ACGTGTAATTCACA  1353

Query 1104  CCTGGCACAACATACTGTAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTC----  1173
            .|||||||.|||||....|||||||||||||||||||.||||||||||||||||||||.|||||||||||    
Sbjct 1354  GCTGGCACGACATAGAAGAATTCACACTGGAGAGAAAACTTACAAGTGTAATGAGTGTCGCAAGACCTTCAGCC  1427

Query 1174  --------------------------------------GTTCAAAA---TT-----------------------  1183
                                                  |.|.||||   ||                       
Sbjct 1428  GCAGGTCATCCCTTCTATGCCATCGTAGACTTCATAGTGGTGAAAAACCTTACAAGTGTAATCAGTGTGGCAAT  1501

Query 1184  ----------------CATCTCTTGTA-----------------------------------------------  1194
                            ||||.||||||                                               
Sbjct 1502  ACCTTCCGTCACCGGGCATCCCTTGTATACCATCGTAGACTTCACACTCTAGAGAAATCTTACAAATGTACGGT  1575

Query 1195  ----------------ATGCATAA---GGTC------------------ATTCATACTGGAGAGAAACGTTACA  1231
                            ||||.|||   .|||                  |||||.||||.|.||||||.|||||
Sbjct 1576  TTGTAACAAGGTTTTCATGCGTAATTCAGTCCTGGCTGTACATACTAGAATTCACACTGCAAAGAAACCTTACA  1649

Query 1232  AGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTAGACTTCATACTGGAGAG  1305
            ||||||||||||||||.||.|.|||||||||..|||||.|.|||.||.||||||||||||||||||||||||||
Sbjct 1650  AGTGTAATGAATGTGGGAAAGCTTTTAATCAACAATCACATCTTTCACGTCATCGTAGACTTCATACTGGAGAG  1723

Query 1306  AAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAACGTCATCAT---AGACT  1376
            |||||||||||.|||.|.|.|||||.|||.||||||..||..||||||...|||||  |||| |||   |||.|
Sbjct 1724  AAACCTTACAAATGTGAAGCATGTGACAAAGTTTTTGGTCAGAAATCAGCTCTTGA--GTCA-CATAAGAGAAT  1794

Query 1377  TCATACTGGAAAGAAATCT-------------------------------------------------------  1395
            ||||||||||.|||||.|.                                                       
Sbjct 1795  TCATACTGGAGAGAAACCATACAGATGTCAGGTTTGTGACACAGCTTTCACGTGGAATTCACAGCTGGCACGAC  1868

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1869  ATACAAGAATTCACACTGGAGAAAAAACTTACAAGTGTAATGAGTGTGGGAAGACCTTCAGTTACAAGTCATCA  1942

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1943  CTTGTATGGCATCGTAGACTTCATGGTGGAGAGAAATCTTACAAATGTAAGGTTTGTGACAAGGCTTTCGTGTG  2016

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2017  TCGTTCCTATGTGGCAAAACATACTAGAATTCACAGTGGAATGAAACCTTACAAGTGTAATGAGTGCAGCAAGA  2090

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2091  CCTTCAGTAACAGGTCATCCCTTGTATGCCATCGTAGAATTCATAGTGGTGAGAAACCTTACAAGTGTAGTGAG  2164

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2165  TGCAGCAAGACGTTCAGTCAGAAGGCAACCCTTCTATGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAA  2238

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2239  GTGTAACGACTGTGGCAATACCTTCCGTCACTGGTCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGA  2312

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2313  AATCTTACAAATGTACGGTTTGTGACAAGGCTTTCGTGCGTAATTCATACCTGGCAAGACATATTAGAATTCAC  2386

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2387  ACTGCAGAGAAACCTTACAAGTGTAATGAATGTGGAAAGGCTTTTAATGAACAATCACACCTTTCACGTCATCA  2460

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2461  TAGAATTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTCAGTCGCAAATCACACCTTA  2534

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2535  AAAGACATAGGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAGCCTTTAGTGACCGG  2608

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2609  TCAACACTTATTCACCATCAGGCAATTCATGGTATAGGGAAATTTGATTAATATAATGATTGTCACAAAGTCTT  2682

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2683  CAGTAACACTACAACAATTGCAAATCATTGGAGAATCCATGATGAAGAGAAATCTTCTGAGTGTAATAAATGTG  2756

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2757  GCATGTTTTTCAGACATTGTTCATACATTGCAGTTCATTGGCAACCTCATACTGGAGAGAAACCTTACAAATGT  2830

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2831  CATGATTGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACAGGAGAATTCATACAGGAGAGAAACCTC  2904

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2905  ACAAGTGTGATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTCGTTGGACATCAGAGAATCCATACTGGA  2978

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2979  CAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTCACTCCTTGCAGAACATGAGAAAAT  3052

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3053  TCATTTTTGAGATAACTGTTCCCAATGCAGCTTTTCAGTAAGTGGTATGCCTGGGAAACATGGTGAGACCCCCG  3126

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3127  TTTCTGCAAAAAATACAAAAATTAGCTGGGAATGATGGCACATGCCTGCAGTATCAACTACTGTGGAGTCTGCA  3200

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3201  GTGGGAGGATGGCTTGAGCCTGGGAGGTCAAGACTATAGTGAGCTGTAATCATGCTACTGCACTCCAGCATGGT  3274

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3275  TGACAGAGCAAGATGCTGTCTAAAAAAGAATACTTATTGTAAAGTTTGGGTACAGGAATAATGAAGTCATTGAT  3348

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3349  AGTTTATGAACAGGCTATGGAGTTGATGCCCAAAAGAAATAAACAGTTTGTAAATGAATAACTTATTTTGAGTT  3422

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3423  GTGACAAGACAATGTTGAAAGTGATGCATGAAGCGGCAGGCAGACCATCCACATCAGTTTTACAGAAAAAAAGT  3496

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3497  TAATCTTGTTCGTGCTGCAGTGAAGAGAACAGCAAACAGGAGAAACAATAGTCAGGAATTCAATAATAGCCTGG  3570

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3571  TTAACATGATGAAACCCCGTCTCTACTAAAAATACAAAGATTAGCTGGGCACAGTGGTGGGCACCTGTAATCCC  3644

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3645  AGCTACTCAAGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAGGCGGAAGTTTCGATGAGCCGGGATCCTGC  3718

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3719  CGTTGCACTCCAGCCTGGGCAACAAGAGCAAACCTCTGTCTAAAACAAACAAACAAAAAGGTCTAGCCCCCTCT  3792

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3793  CCTCCTTTGTCTGCCATCATGGTGTGTGCTTGACTCCACTTCTTGTCATGTCTTCTCACAAGACTTTCAGGATT  3866

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3867  AAGCGGTTTCTGGCCAACAACCAAAAGTAAAATCGTCCGATTTCCCAGTGGATTCGAATGAAAACTGGCAATAA  3940

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 3941  AATCAGGTCCAACTTTAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTATAAGGAATTGCACGTGAGATGG  4014

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4015  CACACATATTTATGCTGTGTGAGCATCATAATCACGTTACTTAAGCTGAAAATGTCACTACCATCTGGAGACTT  4088

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 4089  GGACATGTTTTATTGGGAATATATTTTTTTCTCTCTGAATCTGTTATGAACGCATTGGTTGGGTGGGTTCAGTA  4162

Query 1396  ------------------------------------------------------------------  1395
                                                                              
Sbjct 4163  ATAAACATGTGAGACCTTTCATTTCAAAAAAAAAATTTTAATGACATAATAGATTACCTAAATTTC  4228

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