Nucleotide Global Alignment

Description

Query:
TRCN0000476664
Subject:
XR_002956407.1
Aligned Length:
4925
Identities:
795
Gaps:
4101

Alignment

Query    1  -------------------------------------------------------ATGGCGTCCCGCGGCCGGC  19
                                                                   |||||||||||||||||||
Sbjct    1  ATAAAAACCGGGTGCCGGCAGGCGCCAGTCGCAGGTGTGCTGCTGAGGCGTGAGAATGGCGTCCCGCGGCCGGC  74

Query   20  GTCCGGAGCATGGCGGACCCCCAGAGCTGTTTTATGACGAGACAGAAGCCCGGAAATACGTTCGCAACTCACGG  93
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTCCGGAGCATGGCGGACCCCCAGAGCTGTTTTATGACGAGACAGAAGCCCGGAAATACGTTCGCAACTCACGG  148

Query   94  ATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGTTA  167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGTTA  222

Query  168  CCTGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAAGTTATCTGTCAGATGAAGGGCACTATTGGGTGGGCC  241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAAGTTATCTGTCAGATGAAGGGCACTATTGGGTGGGCC  296

Query  242  TGGATATCAGCCCTGCCATGCTGGATGAGGCTGTGGACCGAGAGATAGAGGGAGACCTGCTGCTGGGGGATATG  315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGGATATCAGCCCTGCCATGCTGGATGAGGCTGTGGACCGAGAGATAGAGGGAGACCTGCTGCTGGGGGATATG  370

Query  316  GGCCAGGGCATCCCATTCAAGCCAGGCACATTCGATGGTTGCATCAGCATTTCTGCTGTGCAGTGGCTCTGTAA  389
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGCCAGGGCATCCCATTCAAGCCAGGCACATTTGATGGTTGCATCAGCATTTCTGCTGTGCAGTGGCTCTGTAA  444

Query  390  TGCTAACAAGAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCTTTTTTGCTTCTCTTTTTTCTGTTCTCGTCC  463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGCTAACAAGAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCTTTTTTGCTTCTCTTTTTTCTGTTCTCGTCC  518

Query  464  GGGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGTTGGAGCTGATCACAACCCAGGCCACA  537
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGTTGGAGCTGATCACAACCCAGGCCACA  592

Query  538  AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTT  611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTT  666

Query  612  GTTTTCTGGGCCTTCGACCTTTATACCAG---------------------------------------------  640
            |||||||||||||||||||||||||||||                                             
Sbjct  667  GTTTTCTGGGCCTTCGACCTTTATACCAGAGGTGAGGGACACTGGGTTTGCAGGCAGGCCTGTGTCTTTTGACT  740

Query  641  --------------------------------------------------------------------------  640
                                                                                      
Sbjct  741  TCCAGGCAGTGGGGCTCAGCCTGCAGAGCCTGCTGGGAGAACACTGGTGGGGAAGCAGGGCCCAGCCCCAGAGT  814

Query  641  --------------------------------------------------------------------------  640
                                                                                      
Sbjct  815  GCAGACCCTGGAGTGCTCACATCCTCTGGAATCTGGAGGCAGAGACCTCTGCTCTGCAGGTCCCAGAAAGGCGT  888

Query  641  --------------------------------------------------------------------------  640
                                                                                      
Sbjct  889  GTCAGTTCCTTCTCGTGGGACTGGACCTCGTCCCTGTCGGAAGGGTCAGGCCTGGGTGCCTGGGCTTCTGGAGT  962

Query  641  -------------------------------------------------------AGGGGCTGAGTGAAAATCA  659
                                                                   |||||||||||||||||||
Sbjct  963  GGGGCAGATGGTTTGAGAACTCTCCAGGGTGACCTGAGTGCACTTTGGTTCCTGCAGGGGCTGAGTGAAAATCA  1036

Query  660  GGATGAAGTTGAACCCAGGGAGTCTGTGTTCACCAATGAGAGGT--------TCCCATTAAGGATGTC------  719
            ||||||||||||||||||||||||||||||||||||||||||||        |.|  |.|||..||.|      
Sbjct 1037  GGATGAAGTTGAACCCAGGGAGTCTGTGTTCACCAATGAGAGGTAAAGCAACTGC--TGAAGCCTGCCCCGGCT  1108

Query  720  GAGGCGGGG--------AATGGTGAGGAAGAGTCGGGCATGG---------GTGC-------------------  757
            |..||||||        |.|.||.|          |.|||||         .|||                   
Sbjct 1109  GCAGCGGGGGCTGCCACATTTGTTA----------GACATGGACTTTCTCTCTGCCCTCACCCAAGCCTCTCAG  1172

Query  758  ------TGGAGAAG-------AAGGAG-CGGCA-------CAGGCGCCA-------------------GGGC-A  790
                  ||.||.||       ||||.| |||.|       ||||..|||                   |||| |
Sbjct 1173  GTCACATGCAGCAGGGACACCAAGGTGACGGTAGAAACATCAGGTCCCATTTGGACTGTGCCTGTTTGGGGCTA  1246

Query  791  G--------------GGAAGT-------CAGACCTGACACCCAGTACACC--------GGCCGCAAGCGCAAGC  835
            |              |||.||       |||.|.|| ||.||.|.||.||        |.||.||    ||.||
Sbjct 1247  GGGGTTTGGGGTCCTGGATGTCTGGGTGCAGCCATG-CAGCCTGGACTCCCTTTGTGAGCCCACA----CATGC  1315

Query  836  CCCGCTTC------------------------------------------------------------------  843
            ||  ||||                                                                  
Sbjct 1316  CC--CTTCCCCTTGCCACGCCTGGCAGGCTGTCTCCTTCTTTTCTGATGCTGCCCTCCACCTGCATCTGGGACC  1387

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1388  CTCTCCCTTGGGTGCTGTGGCTCTCCCTTCCTTCCTGCATCCTCATCTTGACTCTCCTGGGTCACTGCTGTCGG  1461

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1462  CACACAGACATGCTGCACAATTTCTCCTTTTCTAGAAAAGTTCCTTCCTTAACCCCATAACAACAACTAACCAC  1535

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1536  CCCGTTGTTGCTTCCCTTCATAGCAGAACTCAGACCTGCCTCTTCTTCCCCTCCCACCATTCTCTCAATCCACT  1609

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1610  TCTCAGGCTGACAATTCTGTCTCATCACAAATTGTTCTTGTCAACTCCACCACCAATTTCCATCAAGCCACATC  1683

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1684  TGGTCACTTGTGACTTTTTTTCATGTCCTTAATGTGCCTGCTCGGTAGGGTCAAAGACAGCAGTGCGCTCCCTC  1757

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1758  CTTGACGCTTCCTTCACTTGGCCTTCCACCCACCATCGTGGTTTCCTCAGCCTTCCTGGCTGCTCCTCACTCCA  1831

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1832  CTGCTGCTTCCTCTTCGAGTGCTGGGCCCAGCCTGGATTGGATCCCTTCTCTACCTGTGGTGCTGTAAATGCCA  1905

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1906  GCCGGAAGGTCCTAATTCCCAAATGTGTATCTTCAGTCTCTTGCCACCTGGGGTTTCCCAATGCCCCCTCAGTG  1979

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1980  TCTATACCTGGAGTTTCCATGGGTAGTCTCTCTCTGTTACCCAGGCTAGAGTGCAGTGGTGGAATCTTAGCTCA  2053

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2054  CTGCAGCCTCGAACTCCTGGGCTCAAATGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGAGACTACAGGTGCAT  2127

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2128  GCCACCATGCCTGGTTAATTTTTAAAGTTTTTGGTAGAGATGAGGTCTTGCCATGTTGTTCAGGCTGATCTTGA  2201

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2202  ACTCCTGGCCTCAAGCAATCCCCCTGTCTCGGCCTCCCAAAGTTCTGGGATGACTGATGTGAGCCACCATGCCT  2275

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2276  GGCCATCCTCCATTCTTTTTTTTTTTTGAGATGGAGTCTCACTCTTTCCCCCCAGGCTGGAGTGCGGTGGCTTG  2349

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2350  ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCCAGCGATTCTCTTGCGTCAGCCTCCCGAGTAGCTGGGAT  2423

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2424  TGCAGGCGCCCGCCCAACTAATTTTTTGTGTTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGTTCT  2497

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2498  CAAACTCCTGACCTCGTGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCC  2571

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2572  TGGCCTCATCCTCCATTCTTTACCATTCTTGATCATTCCTGTCTTTCCCTACATTTCACATCTTGTCAGCCTGT  2645

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2646  CATTGAGCCCTGCTGTCCGTCCCTCAGTGTGTATCCCCGTGCTGACCCTCCCTGCTTCCAACGAGCCTAATCCA  2719

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2720  GCACTGCCCCTAGCCTGGATTGCTGAACAGCTGCCTGTGTTGTCTCCTTGCCTTTGCAGTCTTTGCCTCTTTCA  2793

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2794  GATTATTTTCTGCATAGCAGCAAGACTGGTCTTTTTCTTTTTTTCTAAAATGTAAGTTGTATCTTGTCATTGCT  2867

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2868  CTTTTAGTGCCTTCATTGCAGTTGTGCTCCCCGCTCATGTTGATTTTCCTTAACACCCTTCACTGCTCTAAGTC  2941

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 2942  ATACACATACCAGTTGACTTGGTTATTATTTGTATCTCCAGCTAGAGTGAAAACTTGGTGAGGACTGGTATTAT  3015

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3016  ATCCCTGACATTAAAAATAGTGTCTTGTTAGTAAAAAGTGCTCAGTATTTTTCTGAATGAATAATTGATTATAA  3089

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3090  GGTAGTGAAGAGGGAGGTTATATCTGAGGTCCAGTTGACATGAGGGAAAGGTCTTAAGACCTTTAAGACATTTA  3163

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3164  AGAGGAAAAATGAGCCCAAAATGCATGTGTTTGGAAGGCCCACAGCTGGGCACAGCCATGCATGTTCCTCACGT  3237

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3238  CCACCATAGGTTTATGCTGCCTGACCCCTTGGGTCTTTGCTCATTTCCCTTAGTTTCCCTAGTCCATTCCCCAT  3311

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3312  GGGGAGCTGGGACCCTTCTGGATGACCTCTTCTCTGAGGCGCCCATCTCGTGCTCCCAGGGAGCACTCCCATCT  3385

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3386  CCTCCCTCCCAGGGGAAGTACACATTGCCTTATCTCCATGTGTCTTAGGATCCTTCTTGTCCTTACACTGGTGT  3459

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3460  CTTCAAACGACATGTCCTAAAAGTAAATGTGGGTAAGTTGAATGACCTGAGCATCCATTCCTCAGCTATTCAAA  3533

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3534  AAGTAGGGGTAGTGCCACCTATCTTGGCAGTGTGTTGAGGGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTG  3607

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3608  TAGGCTCTCACTTCCAGTTCCTCAGATGAGGTACAGGGCAGGGAGGAGCTTCTCCCGTTACTGTCATCTCAGTC  3681

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3682  TAACCACATTCAGGACACTTGTTTATTTTAAATAAACAGGTGAATTAAGAAAAAGTTTTTTAAGTCTTTACCTA  3755

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3756  ATCAGTCTCCAGGCTCTCTTTTTGGCCTGTTCCTCCCTTCCTCCTGGCCGCCTCCCTCCCATGCCTCTCATGTG  3829

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3830  CCTCCTGCAGGGCTGGGCCCCCACTTCTCTTGGGACCTGTGCTTTGGGGCACTCCCCGTCTTCACCTCCTTCCT  3903

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3904  TTAGCTCCATTGATGACTTTCCCCCTTGCTGCTTCTCCCATGGCTCACCTCTTGCCCCCTGGTTCGCCACTCTG  3977

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 3978  CCCTCACTTTGTACTCTTTGTAGAATCTTGAGATGACTCCTCCTGTGTCCCCAGCCCTGCTCTGCAGCTGCTCC  4051

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4052  TGCTTTGTGCTGGCTCATCAGGCTCAGGCATCCGAATGGCAGCTCCTTGGCTTGCCCTGTCTCTGGTTTCTACG  4125

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4126  GATGGTCACAGGGGTCTTCGGGGTTACCCCGCCCTCTTTCCTTCTTCCCTCATACCCCTCAGTCCTTCCTTTTC  4199

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4200  AGACCCTCCTTTCCATCCCTGTCTTCCTGCCCCCAAGCTGTGGGACCCTAAGCTCCTGCTGTGAACTGTCGACT  4273

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4274  GTGCTCTTGAAGTCTAGGTGATGATGTGTCATTGCATTGGTAGAAAGCGGCCTGCTTACTGCTGCTTAGCTGCT  4347

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4348  TCCCGAAGAGGGAACAGACTGCTCGCTGGTGTTTAGGTCTCCATGCCCGGCCCAGCTCTCTCCTCCTCTGCCCA  4421

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4422  CCCAACAACCTCTGTGGCCCGGATGGATGTTATCAGGAAGGAGGGTGTCCAGAGCGGGGAATTGTGTTATAGGG  4495

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4496  AAGGTGGAGCATTTGAGAGAAGGGGCATCCGAGGCCACCAGACTCGGAGGTAAGCTTGCCATGGATTCACATGG  4569

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4570  GGGCCAGTCGGGCAGCCCCATCCATCAGCTGTCCATCAGCTCATAGCTGTGTCTCCGCCACAGGTTCCCATTAA  4643

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4644  GGATGTCGAGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAG  4717

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4718  GGCAGGGAAGTCAGACCTGACACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTT  4791

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 4792  CTGGAAAGGCACTTGCCTCTGCACTTTTCTATATTGTTCAGCTGACAAAGTAGTATTTTAGAAAAGTTCTAAAG  4865

Query  844  -----------------------------------------  843
                                                     
Sbjct 4866  TTATAAAAATGTTTTCTGCAGTAAAAAAAAAGTTCTCTGGG  4906

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