Nucleotide Global Alignment

Description

Query:
TRCN0000476829
Subject:
XR_246275.3
Aligned Length:
1480
Identities:
834
Gaps:
600

Alignment

Query    1  -----------------ATGGCGACCTCCGCGACGTCGCCGCACGCGCCTGGTTTTCCAGCTGAGGGTAGATGC  57
                             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  AAGCGAGCCCTAGAATTATGGCGACCTCCGCGACGTCGCCGCACGCGCCTGGTTTTCCAGCTGAGGGTAGATGC  74

Query   58  GGTTACTATGTGGAAAAGAAGAAACGGTTCTGCAGGATGGTGGTGGCCGCAGGGAAAAGATTTTGTGGTGAACA  131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGTTACTATGTGGAAAAGAAGAAACGGTTCTGCAGGATGGTGGTGGCCGCAGGGAAAAGATTTTGTGGTGAACA  148

Query  132  CGCTGGAGCCATGGAGGAAGAAGATGCTCGGAAAAGAATCCTGTGTCCTTTAGATCCAAAACACACAGTATATG  205
            ||||||||||..||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGCTGGAGCCGCGGAGGAAGAAGATGCTCGGAAAAGAATCCTGTGTCCTTTAGATCCAAAACACACAGTATATG  222

Query  206  AAGATCAACTAGCAAAGCATTTGAAAAAATGTAACTCAAGAGAGAAACCAAAACCTGATTTCTATATTCAAGAT  279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGATCAACTAGCAAAGCATTTGAAAAAATGTAACTCAAGAGAGAAACCAAAACCTGATTTCTATATTCAAGAT  296

Query  280  ATTAATGCAGGCTTAAGAGATGAAACAGAAATACCTGAACAATTAGTTCCAATTTCTTCTCTATCTGAAGAGCA  353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATTAATGCAGGCTTAAGAGATGAAACAGAAATACCTGAACAATTAGTTCCAATTTCTTCTCTATCTGAAGAGCA  370

Query  354  GTTGGAAAAGTTAATTAAGAAATTGAGAAAAGCAAGTGAAGGCTTGAATTCTACACTTAAAGATCATATTATGT  427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTTGGAAAAGTTAATTAAGAAATTGAGAAAAGCAAGTGAAGGCTTGAATTCTACACTTAAAGATCATATTATGT  444

Query  428  CCCATCCAGCATTACACGATGCACTTAATGACCCTAAAAATGGCGATTCTGCAACCAAGCACCTGAAACAGCAG  501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct  445  CCCATCCAGCATTACACGATGCACTTAATGACCCTAAAAATGGCGATTCTGCAACCAAGCACCTGAAACAGC--  516

Query  502  GCTTCTATTTTAGGTAACATTGAAAATTTAAAGTTACTTGGTCCAAGAAGATGCTTTGTTGAGTTTGGAGCGGG  575
                                                                                      
Sbjct  517  --------------------------------------------------------------------------  516

Query  576  AAAGGGAAAATTATCTCATTGGGTTGATATTGCCTTAAAAGATGCTGAAAAAGTTCACTTCATCCTAGTGGAAA  649
                                                   |||||||||||||||||||||||||||||||||||
Sbjct  517  ---------------------------------------AGATGCTGAAAAAGTTCACTTCATCCTAGTGGAAA  551

Query  650  AGGTGACCACAAGATTCAAGGTGGATGGAAAACACAGAAAGAAAAATTCAGTGTTTGAAAGACTTCAAATTGAT  723
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  AGGTGACCACAAGATTCAAGGTGGATGGAAAACACAGAAAGAAAAATTCAGTGTTTGAAAGACTTCAAATTGAT  625

Query  724  ATTCAACACTTGTGTTTGAACAAGATTCCTGTGCTAAGAGAAGAAAAACTACCTGTGGTAGGAATTGGAAAGCA  797
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  626  ATTCAACACTTGTGTTTGAACAAGATTCCTGTGCTAAGAGAAGAAAAACTACCTGTGGTAGGAATTGGAAAGCA  699

Query  798  TCTGTGTGGTATGGCAACAGATCTTGCATTACGATGTTTGGTTGAAACCTA-TGCTGCCAGTTTTGAGGAAAGG  870
            ||||||||||||||||||||        .||||          .||||.|| ||.|                  
Sbjct  700  TCTGTGTGGTATGGCAACAG--------GTACG----------TAAACATACTGAT------------------  737

Query  871  AATGAAGAACCTTTAGCCA--AACGCATAAAGAATGATAAAACAGAAAAAGAAATTTACACTTTGGCCAAGGAA  942
            ||||       ||||  ||  ||.||||.|||                            .|||||||      
Sbjct  738  AATG-------TTTA--CATTAATGCATTAAG----------------------------TTTTGGCC------  768

Query  943  GGAAATGAAAAAAATGTCCCAGAGAAGTGGAACCCTGTGGCTGGCATTGTTATTGCACTCTGTTGTCACCACAG  1016
                     .||..||.|||         .|||           ||||          ||.||.|||.|     
Sbjct  769  ---------TAACCTGGCCC---------CAAC-----------CATT----------TCAGTGGTCTC-----  798

Query 1017  GTGTGATTGGAGACATTATGTGGGCA----AAGAATATTT-CAGGGCTCTAGGCC----------TTGGA-GCA  1074
            .|.|||.|.||.|..||||||...||    ||.|||.||| .||.||.|| ||||          ||.|| |||
Sbjct  799  TTTTGAATAGATATCTTATGTTTACAACTCAATAATCTTTATAGAGCACT-GGCCCTGTGCTTTATTAGATGCA  871

Query 1075  GTGGAATTCCATTATTT-CCAGCGAATGAGTAGTTGGGCAACTTGTGGGATGCGGAAAACATCTTTGGAAACCT  1147
             |.|..||||  ||||| .|.||..||     .||||.||..|||..||||   |||                 
Sbjct  872  -TAGCTTTCC--TATTTATCTGCTCAT-----ATTGGCCATTTTGCAGGAT---GAA-----------------  917

Query 1148  CAAATAGTACCACAAAGAGGCAAGATAATCAGAATGATGATAGTGAAGAGCATGATGATGGAGGATACAGAATC  1221
                                                                                      
Sbjct  918  --------------------------------------------------------------------------  917

Query 1222  ACAGATGATGGCGCTGATTGTTTGCCTGGGCTTCTTAGTGTTGAAGAAAAGAAGAAAATAGGGCATCTTTGTAA  1295
                                                                                      
Sbjct  918  --------------------------------------------------------------------------  917

Query 1296  ATTGCTGATTGACCAAGGTCGAATCCAGTATTTGCAGCAGAAGGGATTCAGTCCTGCTTTGCAGTACTATACAG  1369
                                                                                      
Sbjct  918  --------------------------------------------------------------------------  917

Query 1370  ACCCTCTGGTGTCTTTGGAAAATGTTTTGTTAACTGCTTTACCAAATCATTCTTCATCACCAGAAACAACTGCT  1443
                                                                                      
Sbjct  918  --------------------------------------------------------------------------  917

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