Nucleotide Global Alignment

Description

Query:
TRCN0000477220
Subject:
XR_001753298.1
Aligned Length:
2968
Identities:
1712
Gaps:
1252

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AACCTACCCAACCCATCCAGGAGCTGCTACACATTGAGGAAGGGGCAGAATGAATGCTGGGAAGCAACTACAAA  74

Query    1  -----------------------------------------------ATGGCG-GA-----TTTCGAAG-----  16
                                                           ||||.| ||     ||||..||     
Sbjct   75  GAACACTGCACAGTGGCTGTACCATTTTACATCCCTACCAGCAATGTATGGAGTGATCCAGTTTCTCAGCATCC  148

Query   17  -------------------------------ATTTGAG-------GAATATGGTTTCTAGTTTTAGGGTTTCTG  52
                                           ||||.||       |||||||||||||||||||||||||||||
Sbjct  149  TCGCCAGCATTTGGTGTTATCAGTGTTTTTCATTTTAGCCATTCTGAATATGGTTTCTAGTTTTAGGGTTTCTG  222

Query   53  AACTACAAGTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGGCGCTG  126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AACTACAAGTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGGCGCTG  296

Query  127  CATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATATCCACG  200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATATCCACG  370

Query  201  AACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTTTGGATGGTGGCTCATCACCTG  274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTTTGGATGGTGGCTCATCACCTG  444

Query  275  TAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTTACACCTCACTCACCATCCTCT  348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTTACACCTCACTCACCATCCTCT  518

Query  349  CCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCCAATTCCTCC  422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCCAATTCCTCC  592

Query  423  TGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTCATCAAGCCCACGAGTT  496
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTCATCAAGCCCACGAGTT  666

Query  497  TAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTGACACCTCAACAAGTTAGAGAG  570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTGACACCTCAACAAGTTAGAGAG  740

Query  571  ATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTTTGCCT  644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTTTGCCT  814

Query  645  GGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCTATTTC  718
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCTATTTC  888

Query  719  CTTTGCCTGGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACA  792
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTTTGCCTGGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACA  962

Query  793  TCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAATTA  866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAATTA  1036

Query  867  CTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGAGATTAAAAATGAAAGGTATTA  940
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGAGATTAAAAATGAAAGGTATTA  1110

Query  941  GAAACCCTGATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTACAACT  1014
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAAACCCTGATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTACAACT  1184

Query 1015  AGCCTTCGGGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACTTGTAC  1088
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCCTTCGGGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACTTGTAC  1258

Query 1089  ACATCTGCAGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGCCCACCTGGATTTGTCCTGTGT  1162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ACATCTGCAGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGCCCACCTGGATTTGTCCTGTGT  1332

Query 1163  GTGACAAAAAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGAT  1236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GTGACAAAAAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGAT  1406

Query 1237  GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAGAAGCTATGAAAGTATC  1310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAGAAGCTATGAAAGTATC  1480

Query 1311  CAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGTGAGG  1384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGTGAGG  1554

Query 1385  CAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTCCTGCC  1458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTCCTGCC  1628

Query 1459  AAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTC  1532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTC  1702

Query 1533  TGTAAGGGTGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAGTACCAT  1606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGTAAGGGTGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAGTACCAT  1776

Query 1607  TCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGAAGAAATGATATTAATAATGAA  1680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGAAGAAATGATATTAATAATGAA  1850

Query 1681  CTGAAGCTTGGAACATCTTCTGATACTGTGCAACAG--------------------------------------  1716
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct 1851  CTGAAGCTTGGAACATCTTCTGATACTGTGCAACAGTGAATACAAAATAAAACAAATAATTTGTATTTATGGAG  1924

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 1925  TGGAAAACAGCTTATTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTTTGGATTT  1998

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 1999  TCTTTCCCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTATGTTTTTGGATAGTCTCACCTCACCCTTAACAG  2072

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2073  CAAGCAGTACGTCTGTCACCACCACCAGCTCCCATGAAAGCAGTACTCATGTTAGTTCATCCAGCAGCAGGAGT  2146

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2147  GAGACAGGGGTCATAACCAGCAGTGGAAGTAACATTCCTGACATCATCTCATTGGACTAAAGGAGGACTCACTT  2220

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2221  GATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAGTCTGTGGAAACGTTCTTTTTTTTTTTTT  2294

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2295  TTTAATAATTTGGTATTTATTGAAAGTCAGATGGATTCTTTTGCTTTCTGAGGGGTGAACACAGAAGACTGCAA  2368

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2369  CAAGAACCAAATGACATGCAAGGATTTTTCTTAATTATGCTGTACTCTCAGCATCAGATACATTCAACCATAAC  2442

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2443  TGTATCTTCCTGAGAGATGGATTTCACTTTCATACGTTAATGGATGGAGTCTACAAATCAGTGAAAAAAGTTTT  2516

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2517  TGTTAAAATAAAGAGCAATAAAATTATGTAAATATTCAAGTAACCTTTTTTCTAATTAAAAAAAAAATTGTAAT  2590

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2591  CACTGATTCTAGAATGACAGCAACTTCTGTTTAACCTTACGTGAAGGAAAAAAAATATATGGAAAGAACTTAAT  2664

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2665  GTTTGCTGAATGAGTCCTTTCCATGGAGATTTGCTCTGTTTCATTGAAGTAATGAAGTTTCAGTACGTGGCCAA  2738

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2739  AGCTTGGATTCCACTTTTCGTCCTGCATTTCCACTTTTCTTCGTGATTGCATCAAAGAAAAATGGCATTCGTGT  2812

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2813  TACTTGGTTTTTTTCCTGCTTATCATTTACACTTTGACGTTGTTTGCTAATGAGTGCTGTGTGAAGTTCTGGGA  2886

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2887  TTTGGCTACTCTTCATTGGTGATTATGTTTAAAAGCACTATGCAGATTCTGCCCTGACATAAAGTGTGTTATTA  2960

Query 1717  --------  1716
                    
Sbjct 2961  TGTTTTTA  2968

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