Nucleotide Global Alignment

Description

Query:
TRCN0000477220
Subject:
XR_001753300.1
Aligned Length:
2899
Identities:
1712
Gaps:
1183

Alignment

Query    1  ----------------------------------------------------ATGGCG-GA-----TTTCGAAG  16
                                                                ||||.| ||     ||||..||
Sbjct    1  CTTTCAAAGTTTCACAAGTGGCTGTACCATTTTACATCCCTACCAGCAATGTATGGAGTGATCCAGTTTCTCAG  74

Query   17  ------------------------------------ATTTGAG-------GAATATGGTTTCTAGTTTTAGGGT  47
                                                ||||.||       ||||||||||||||||||||||||
Sbjct   75  CATCCTCGCCAGCATTTGGTGTTATCAGTGTTTTTCATTTTAGCCATTCTGAATATGGTTTCTAGTTTTAGGGT  148

Query   48  TTCTGAACTACAAGTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGG  121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTCTGAACTACAAGTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGG  222

Query  122  CGCTGCATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATAT  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGCTGCATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATAT  296

Query  196  CCACGAACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTTTGGATGGTGGCTCATC  269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCACGAACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTTTGGATGGTGGCTCATC  370

Query  270  ACCTGTAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTTACACCTCACTCACCAT  343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCTGTAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTTACACCTCACTCACCAT  444

Query  344  CCTCTCCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCCAATT  417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCTCTCCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCCAATT  518

Query  418  CCTCCTGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTCATCAAGCCCAC  491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCTCCTGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTCATCAAGCCCAC  592

Query  492  GAGTTTAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTGACACCTCAACAAGTTA  565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAGTTTAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTGACACCTCAACAAGTTA  666

Query  566  GAGAGATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTT  639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGAGATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTT  740

Query  640  TGCCTGGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCT  713
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGCCTGGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCT  814

Query  714  ATTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATA  787
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATA  888

Query  788  TTACATCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAG  861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTACATCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAG  962

Query  862  AATTACTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGAGATTAAAAATGAAAGG  935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AATTACTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGAGATTAAAAATGAAAGG  1036

Query  936  TATTAGAAACCCTGATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTA  1009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TATTAGAAACCCTGATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTA  1110

Query 1010  CAACTAGCCTTCGGGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACT  1083
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CAACTAGCCTTCGGGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACT  1184

Query 1084  TGTACACATCTGCAGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGCCCACCTGGATTTGTCC  1157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGTACACATCTGCAGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGCCCACCTGGATTTGTCC  1258

Query 1158  TGTGTGTGACAAAAAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAAATTCTCAATGACTGTT  1231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGTGTGTGACAAAAAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAAATTCTCAATGACTGTT  1332

Query 1232  CTGATGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAGAAGCTATGAAA  1305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CTGATGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAGAAGCTATGAAA  1406

Query 1306  GTATCCAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAG  1379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTATCCAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAG  1480

Query 1380  TGAGGCAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTC  1453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TGAGGCAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTC  1554

Query 1454  CTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCA  1527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCA  1628

Query 1528  TCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAGT  1601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAGT  1702

Query 1602  ACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGAAGAAATGATATTAATA  1675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  ACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGAAGAAATGATATTAATA  1776

Query 1676  ATGAACTGAAGCTTGGAACATCTTCTGATACTGTGCAACAG---------------------------------  1716
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct 1777  ATGAACTGAAGCTTGGAACATCTTCTGATACTGTGCAACAGTGAATACAAAATAAAACAAATAATTTGTATTTA  1850

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 1851  TGGAGTGGAAAACAGCTTATTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTTTG  1924

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 1925  GATTTTCTTTCCCTTATTCCAGTTGATCCCCAGTACTGTCCTCCTATGTTTTTGGATAGTCTCACCTCACCCTT  1998

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 1999  AACAGCAAGCAGTACGTCTGTCACCACCACCAGCTCCCATGAAAGCAGTACTCATGTTAGTTCATCCAGCAGCA  2072

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2073  GGAGTGAGACAGGGGTCATAACCAGCAGTGGAAGTAACATTCCTGACATCATCTCATTGGACTAAAGGAGGACT  2146

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2147  CACTTGATTCTGGGAATCATTCATCAGAACTGCTTTTTCTTGGATCTCTAGTCTGTGGAAACGTTCTTTTTTTT  2220

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2221  TTTTTTTTAATAATTTGGTATTTATTGAAAGTCAGATGGATTCTTTTGCTTTCTGAGGGGTGAACACAGAAGAC  2294

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2295  TGCAACAAGAACCAAATGACATGCAAGGATTTTTCTTAATTATGCTGTACTCTCAGCATCAGATACATTCAACC  2368

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2369  ATAACTGTATCTTCCTGAGAGATGGATTTCACTTTCATACGTTAATGGATGGAGTCTACAAATCAGTGAAAAAA  2442

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2443  GTTTTTGTTAAAATAAAGAGCAATAAAATTATGTAAATATTCAAGTAACCTTTTTTCTAATTAAAAAAAAAATT  2516

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2517  GTAATCACTGATTCTAGAATGACAGCAACTTCTGTTTAACCTTACGTGAAGGAAAAAAAATATATGGAAAGAAC  2590

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2591  TTAATGTTTGCTGAATGAGTCCTTTCCATGGAGATTTGCTCTGTTTCATTGAAGTAATGAAGTTTCAGTACGTG  2664

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2665  GCCAAAGCTTGGATTCCACTTTTCGTCCTGCATTTCCACTTTTCTTCGTGATTGCATCAAAGAAAAATGGCATT  2738

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2739  CGTGTTACTTGGTTTTTTTCCTGCTTATCATTTACACTTTGACGTTGTTTGCTAATGAGTGCTGTGTGAAGTTC  2812

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2813  TGGGATTTGGCTACTCTTCATTGGTGATTATGTTTAAAAGCACTATGCAGATTCTGCCCTGACATAAAGTGTGT  2886

Query 1717  -------------  1716
                         
Sbjct 2887  TATTATGTTTTTA  2899

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