Nucleotide Global Alignment

Description

Query:
TRCN0000477508
Subject:
XM_024448667.1
Aligned Length:
2839
Identities:
1380
Gaps:
1439

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGCGGGCTCCTGGCAGACCCTGGGGTTCCGCTGCTCGTTGCCATGGCTCCCGCCGGAGCGGCCAGAGCGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGTCGGGTTGGGTGTCAGCGGTATTCCGGGCCCGGTTCTCCACCCAGGCCTGGACCTGGACCCTCGGGCACTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCGTCCGTCTGTAGGTTTCCAGGCAGAGGAAATCCTGAGACATCCAGGCGCAGCTGGGAGTTGCTACCTGGCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCATCCGTGAGCACAGCGAGGTGCTGTCTTTCATGCTTATCTGTCTTCCTCTTGAATTCAGATTCCCAACCTGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGAGCATCCGCACACCCACTCAGGAGTTGGGGCCCAGCTCCCAGTTTACTTGGTTTCCCTTGTGCAGCCTGGGG  370

Query    1  --------------------------------ATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTG  42
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTCTGCCCAGGCCACCACAGGCAGGGGTCGACATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTG  444

Query   43  AAAGGTTCCATGAATGATGGTCGACTGAGGTTGAGCCGTCAGGGCATCATCTTCAAGAATAGCAAGACAGGCAA  116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAGGTTCCATGAATGATGGTCGACTGAGGTTGAGCCGTCAGGGCATCATCTTCAAGAATAGCAAGACAGGCAA  518

Query  117  AGTGGACAACATCCAGGCTGGGGAGTTAACAGAAGGTATCTGGCGCCGTGTTGCTCTGGGCCATGGACTTAAAC  190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGTGGACAACATCCAGGCTGGGGAGTTAACAGAAGGTATCTGGCGCCGTGTTGCTCTGGGCCATGGACTTAAAC  592

Query  191  TGCTTACAAAGAATGGCCATGTCTACAAGTATGATGGCTTCCGAGAATCGGAGTTTGAGAAACTCTCTGATTTC  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGCTTACAAAGAATGGCCATGTCTACAAGTATGATGGCTTCCGAGAATCGGAGTTTGAGAAACTCTCTGATTTC  666

Query  265  TTCAAAACTCACTATCGCCTTGAGCTAATGGAGAAGGACCTTTGTGTGAAGGGCTGGAACTGGGGGACAGTGAA  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTCAAAACTCACTATCGCCTTGAGCTAATGGAGAAGGACCTTTGTGTGAAGGGCTGGAACTGGGGGACAGTGAA  740

Query  339  ATTTGGT-------------------------------------------------------------------  345
            |||||||                                                                   
Sbjct  741  ATTTGGTGGTGAGTCCTGGGGAAGACTGAGGTTTGGGGAGGAAGATAGGGTGAAGGGTTTCAGCCTTTTACTTG  814

Query  346  --------------------------------------------------------------------------  345
                                                                                      
Sbjct  815  TTTTGCTCTTTTCCCTCTGCCACTGTCTCTGGTTTCCTATCTATTTGCATGTTCATCATGTGTTTATTGAGTAC  888

Query  346  --------------------------------------------------------------------------  345
                                                                                      
Sbjct  889  CTACAGTATACTGCCTGGGGTTGGGGTTATAGTCTAAACAGACTAACCGCAGTATCCTGTCTCTGTGGAACTCA  962

Query  346  ----------------------------------------------------------------------GGGC  349
                                                                                  ||||
Sbjct  963  GTTTGGTGGGAATATTGCTTATGCAGACTTAAGGGGAGGAGCTTGTGGCTGGATAAGCCCTTTCCTCACAGGGC  1036

Query  350  AGCTGCTTTCCTTTGACATTGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACA  423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGCTGCTTTCCTTTGACATTGGTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACA  1110

Query  424  GGCAAGAATGAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTA  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGCAAGAATGAGGTGACACTGGAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTA  1184

Query  498  CGTCCCACCCACCCAGGAGGATGGTGTGGACCCTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATG  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CGTCCCACCCACCCAGGAGGATGGTGTGGACCCTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATG  1258

Query  572  TAATCCAGGCCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACTCCTCGTGGTCGTTATGAC  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TAATCCAGGCCACGGGAGATGCCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACTCCTCGTGGTCGTTATGAC  1332

Query  646  ATTCGGATCTACCCCACCTTTCTGCACCTGCATGGCAAGACCTTTGACTACAAGATCCCCTACACCACAGTACT  719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATTCGGATCTACCCCACCTTTCTGCACCTGCATGGCAAGACCTTTGACTACAAGATCCCCTACACCACAGTACT  1406

Query  720  GCGTCTGTTTTTGTTACCCCACAAGGACCAGCGCCAGATGTTCTTTGTGATCAGCCTGGATCCCCCAATCAAGC  793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCGTCTGTTTTTGTTACCCCACAAGGACCAGCGCCAGATGTTCTTTGTGATCAGCCTGGATCCCCCAATCAAGC  1480

Query  794  AAGGCCAAACTCGCTACCACTTCCTGATCCTCCTCTTCTCCAAGGACGAGGACATTTCGTTGACTCTGAACATG  867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AAGGCCAAACTCGCTACCACTTCCTGATCCTCCTCTTCTCCAAGGACGAGGACATTTCGTTGACTCTGAACATG  1554

Query  868  AACGAGGAAGAAGTGGAGAAGCGCTTTGAGGGTCGGCTCACCAAGAACATGTCAGGATCCCTCTATGAGATGGT  941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AACGAGGAAGAAGTGGAGAAGCGCTTTGAGGGTCGGCTCACCAAGAACATGTCAGGATCCCTCTATGAGATGGT  1628

Query  942  CAGCCGGGTCATGAAAGCACTGGTAAACCGCAAGATCACAGTGCCAGGCAACTTCCAAGGGCACTCAGGGGCCC  1015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CAGCCGGGTCATGAAAGCACTGGTAAACCGCAAGATCACAGTGCCAGGCAACTTCCAAGGGCACTCAGGGGCCC  1702

Query 1016  AGTGCATTACCTGTTCCTACAAGGCAAGCTCAGGACTGCTCTACCCGCTGGAGCGGGGCTTCATCTACGTCCAC  1089
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGTGCATTACCTGTTCCTACAAGGCAAGCTCAGGACTGCTCTACCCGCTGGAGCGGGGCTTCATCTACGTCCAC  1776

Query 1090  AAGCCACCTGTGCACATCCGCTTCGATGAGATCTCCTTTGTCAACTTTGCTCGTGGTACCACTACTACTCGTTC  1163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AAGCCACCTGTGCACATCCGCTTCGATGAGATCTCCTTTGTCAACTTTGCTCGTGGTACCACTACTACTCGTTC  1850

Query 1164  CTTTGACTTTGAAATTGAGACCAAGCAGGGCACTCAGTATACCTTCAGCAGCATTGAGAGGGAGGAGTACGGGA  1237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CTTTGACTTTGAAATTGAGACCAAGCAGGGCACTCAGTATACCTTCAGCAGCATTGAGAGGGAGGAGTACGGGA  1924

Query 1238  AACTGTTTGATTTTGTCAACGCGAAAAAGCTCAACATCAAAAACCGAGGATTGAAAGAGGGCATGAACCCAAGC  1311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||   ||  
Sbjct 1925  AACTGTTTGATTTTGTCAACGCGAAAAAGCTCAACATCAAAAACCGAGGATTGAAAGA------GAA---AA--  1987

Query 1312  TACGATGAATATGC---TGACTCTGATGAGGACCAGCATGATGCCTACT--TGGAG-AGGATGAAGGAGGAAGG  1379
             |.||.|    |||   ||||.||                 |.||..||  |||.| |||.|            
Sbjct 1988  -AAGAGG----TGCGTGTGACCCT-----------------TTCCCCCTCCTGGTGCAGGTT------------  2027

Query 1380  CAAGATCCGGGAGGAGAATGCCAATGAC-----AGCAG-CGATG-----ACTCAGGAGAAGAAACCGATGAGTC  1442
                 |||        ..|||  |||||     |.||| |.|||     .||||||||      ||        
Sbjct 2028  -----TCC--------TCTGC--ATGACCTTAGACCAGTCTATGCAGCCCCTCAGGAG------CC--------  2072

Query 1443  ATTCAACCCAGGT-------GAAGA-GGAGGAAGATGTGGCAGAGGAGTTTGACAGCAACGCCTCTGCCAGCTC  1508
                  |||| ||       |.||| |||||       |||...||..||.|||                    
Sbjct 2073  ------CCCA-GTGGGGCTGGGAGAGGGAGG-------GGCTTGGGGCTTGGAC--------------------  2112

Query 1509  CTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGCGGAAACAGCTCAAAAAGGCCAAGATGGCCAAGG  1582
                                                                                      
Sbjct 2113  --------------------------------------------------------------------------  2112

Query 1583  ACCGCAAGAGCCGCAAGAAGCCTGTGGAGGTGAAGAAGGGCAAAGACCCCAATGCCCCCAAGAGGCCCATGTCT  1656
                                                                                      
Sbjct 2113  --------------------------------------------------------------------------  2112

Query 1657  GCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGCATCAGCATCACGGATCT  1730
                                                                                      
Sbjct 2113  --------------------------------------------------------------------------  2112

Query 1731  TTCCAAGAAGGCAGGCGAGATCTGGAAGGGAATGTCCAAAGAGAAGAAAGAGGAGTGGGATCGCAAGGCTGAGG  1804
                                                                                      
Sbjct 2113  --------------------------------------------------------------------------  2112

Query 1805  ATGCCAGGAGGGACTATGAAAAAGCCATGAAAGAATATGAAGGGGGCCGAGGCGAGTCTTCTAAGAGGGACAAG  1878
                                                                                      
Sbjct 2113  --------------------------------------------------------------------------  2112

Query 1879  TCAAAGAAGAAGAAGAAAGTAAAGGTAAAGATGGAAAAGAAATCCACGCCCTCTAGGGGCTCATCATCCAAGTC  1952
                                                                                      
Sbjct 2113  --------------------------------------------------------------------------  2112

Query 1953  GTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTTTGTGTCTAGTGATGAGAGCTCTTCGGGAGAGA  2026
                                                                                      
Sbjct 2113  --------------------------------------------------------------------------  2112

Query 2027  ACAAGAGCAAAAAGAAGAGGAGGAGGAGCGAGGACTCTGAAGAAGAAGAACTAGCCAGTACTCCCCCCAGCTCA  2100
                                                                                      
Sbjct 2113  --------------------------------------------------------------------------  2112

Query 2101  GAGGACTCAGCGTCAGGATCCGATGAG  2127
                                       
Sbjct 2113  ---------------------------  2112

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