Nucleotide Global Alignment

Description

Query:
TRCN0000478123
Subject:
XM_011513562.3
Aligned Length:
1602
Identities:
1325
Gaps:
276

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCCCATAAAGATGGCATTAATGCAGATGCACATGTTGTTTTTCAGATACAGACTTACTCAGACATTGCCAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGTCTCCAACTTCTGTAACCTTATAGGGTCTGCAGAGAATGCCATGTTTGAAGATGATGATTGGTGGTCTTGGG  148

Query    1  ---------------------AT-----------GGAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCT  42
                                 ||           ||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATGAAAAGTATTTGTGTTGTGATAACGGTGTTGGGGAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCT  222

Query   43  CCAGAAGAGTGGAAATGCCTGGACCCTGACCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAA  116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCAGAAGAGTGGAAATGCCTGGACCCTGACCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAA  296

Query  117  CCTGGTCTCCCTGGGTGTTGCTATCTCTAACCCAGACCTGGTCACCTGTCTGGAGCAAAGAAAAGAGCCCTACA  190
            |||||||||||||                                                             
Sbjct  297  CCTGGTCTCCCTG-------------------------------------------------------------  309

Query  191  ATGTGAAGATACATAAGATCGTAGCCAGACCCCCAGCTATGTGTTCTCATTTCACCCAAGACCATTGGCCAGTG  264
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  310  -----------------------------------GCTATGTGTTCTCATTTCACCCAAGACCATTGGCCAGTG  348

Query  265  CAGGGCATAGAAGATTCATTCCACAAACTTATACTGAGAAGATATGAGAAATGTGGACATGATAATTTACAATT  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  349  CAGGGCATAGAAGATTCATTCCACAAACTTATACTGAGAAGATATGAGAAATGTGGACATGATAATTTACAATT  422

Query  339  AAGAAAAGGCTGTAAAAGTTTGAATGAGTGTAAGTTGCAGAAAGGAGGTTATAATGAATTTAATGAATGCTTGT  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  423  AAGAAAAGGCTGTAAAAGTTTGAATGAGTGTAAGTTGCAGAAAGGAGGTTATAATGAATTTAATGAATGCTTGT  496

Query  413  CAACTACCCAGAGCAAAATACTTCAGTGTAAAGCAAGTGTCAAAGTTGTTAGTAAATTTTCAAATTCAAACAAA  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  497  CAACTACCCAGAGCAAAATACTTCAGTGTAAAGCAAGTGTCAAAGTTGTTAGTAAATTTTCAAATTCAAACAAA  570

Query  487  CGTAAGACAAGACATACTGGAGAGAAACACTTTAAAGAATGTGGCAAATCATTTCAGAAGTTTTCACACCTAAC  560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  571  CGTAAGACAAGACATACTGGAGAGAAACACTTTAAAGAATGTGGCAAATCATTTCAGAAGTTTTCACACCTAAC  644

Query  561  TCAACATAAGGTAATTCATGCTGGAGAGAAACCCTACACTTGTGAAGAATGTGGCAAAGCCTTTAAATGGTCTT  634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  645  TCAACATAAGGTAATTCATGCTGGAGAGAAACCCTACACTTGTGAAGAATGTGGCAAAGCCTTTAAATGGTCTT  718

Query  635  TAATATTTAATGAACATAAGAGAATTCATACTGGAGAGAAACCTTTTACTTGTGAAGAATGTGGCAGCATCTTT  708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  719  TAATATTTAATGAACATAAGAGAATTCATACTGGAGAGAAACCTTTTACTTGTGAAGAATGTGGCAGCATCTTT  792

Query  709  ACCACATCCTCACACTTTGCTAAGCATAAAATAATTCATACTGGAGAAAAACCCTATAAATGTGAAGAATGTGG  782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  ACCACATCCTCACACTTTGCTAAGCATAAAATAATTCATACTGGAGAAAAACCCTATAAATGTGAAGAATGTGG  866

Query  783  CAAAGCCTTTAATAGGTTCACAACCCTTACTAAACATAAGAGAATTCATGCTGGAGAGAAACCCATCACATGTG  856
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  867  CAAAGCCTTTAATAGGTTCACAACCCTTACTAAACATAAGAGAATTCATGCTGGAGAGAAACCCATCACATGTG  940

Query  857  AAGAATGTAGGAAAATCTTTACCTCATCCTCAAACTTTGCNAAACATAAGCGAATTCATACTGGAGAGAAACCC  930
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  941  AAGAATGTAGGAAAATCTTTACCTCATCCTCAAACTTTGCCAAACATAAGCGAATTCATACTGGAGAGAAACCC  1014

Query  931  TACAAATGTGAAGAATGTGGCAAAGCCTTTAATAGGTCCACAACCCTTACTAAACATAAGAGAATTCATACTGG  1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015  TACAAATGTGAAGAATGTGGCAAAGCCTTTAATAGGTCCACAACCCTTACTAAACATAAGAGAATTCATACTGG  1088

Query 1005  AGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCTTTTAGACAGTCCTCAAAACTGAATGAACATAAGAAAG  1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089  AGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCTTTTAGACAGTCCTCAAAACTGAATGAACATAAGAAAG  1162

Query 1079  TTCATACTGGAGAGCGGCCCTACAAATGTGATGAATGTGGCAAAGCCTTTGGACGGTCCAGGGTCCTGAATGAA  1152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163  TTCATACTGGAGAGCGGCCCTACAAATGTGATGAATGTGGCAAAGCCTTTGGACGGTCCAGGGTCCTGAATGAA  1236

Query 1153  CATAAAAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGACGGTCCACAGA  1226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237  CATAAAAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGACGGTCCACAGA  1310

Query 1227  TCGGAGTCAACATAAGAAAATTCATAGTGCAGATAAACCCTACAAATGTAAAGAATGTGACAAAGCCTTTAAAC  1300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311  TCGGAGTCAACATAAGAAAATTCATAGTGCAGATAAACCCTACAAATGTAAAGAATGTGACAAAGCCTTTAAAC  1384

Query 1301  AATTTTCGCTCCTGAGTCAACATAAGAAAATTCATACTGTAGATAAACCCTACAAATGTAAAGATTGTGACAAA  1374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1385  AATTTTCGCTCCTGAGTCAACATAAGAAAATTCATACTGTAGATAAACCCTACAAATGTAAAGATTGTGACAAA  1458

Query 1375  GCCTTTAAACGGTTCTCACACCTGAATAAACATAAGAAAATTCATACT  1422
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1459  GCCTTTAAACGGTTCTCACACCTGAATAAACATAAGAAAATTCATACT  1506

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