Nucleotide Global Alignment

Description

Query:
TRCN0000478280
Subject:
NM_001369764.1
Aligned Length:
2117
Identities:
164
Gaps:
1943

Alignment

Query    1  ATGGCTC-TCCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  73
            ||||||| |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTCTTCCTCAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74

Query   74  GGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGAGTTGT  147
            |||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||||    |.
Sbjct   75  GGACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGG----GG  144

Query  148  CAGGG----------GAGTGTC----------CATT--------------GACAGCAC-----------CTGCC  176
            ||.||          |.|| ||          ||||              |.||.|||           .|||.
Sbjct  145  CAAGGCAATACAGAAGCGT-TCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACATTGGAGATTTTTGCT  217

Query  177  TCC-----------------------------------------------------------------------  179
            |||                                                                       
Sbjct  218  TCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAAAGAAGATGAAACAAATGACCATGCAGCA  291

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  292  CCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAGCATAT  365

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  366  TAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTGCACATATTTCAGCCTGAAGGGAAAATTG  439

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  440  GTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAA  513

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  514  ACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAACGGAATGTACACAT  587

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  588  GAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTAATTGTAGCTCACTTTTAAAAAAACATCAGA  661

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  662  TAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGCAAGGTATTTAATCAGAAGCGATACCTTGCA  735

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  736  TGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGATCTTTGGTCACAATAC  809

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  810  ATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCA  883

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  884  GTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGAGGGAAACCATACAAATGTAAGGTTTGTGAC  957

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  958  AAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAATTCACACTGGAGAGAAACCTTACAAGTGTAA  1031

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1032  TGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCCATCGTAGGCTTCATACTGGAGAGAAACCTT  1105

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1106  ATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAAGAGGATTCATACTGGA  1179

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1180  GAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATATAATTCATACCTGGCAAAACATAGTATAAT  1253

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1254  TCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAACTCTTGCACGCC  1327

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1328  ATCATAGACTTCATACTGCAGAGAAACCATACAAATGTGAAGAATGTGACAAAGTTTTCAGGTGCAAATCACAC  1401

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1402  CTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAG  1475

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1476  TGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGTGGCAAGG  1549

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1550  TTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATGTGAAGAA  1623

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1624  TGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAACCGTACAA  1697

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1698  ATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGGAGAGA  1771

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1772  AACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAGGCTTCAT  1845

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1846  ACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTATACCATCA  1919

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1920  TAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCACACCTTG  1993

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1994  CACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATG  2067

Query  180  ---------------------------------------------  179
                                                         
Sbjct 2068  TCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCT  2112

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.