Nucleotide Global Alignment

Description

Query:
TRCN0000478280
Subject:
NR_163139.1
Aligned Length:
4924
Identities:
169
Gaps:
4746

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGCGGATCCCGTGGAATGACGGTGACGCCGCGGCGGGCGGATTGACTTCTAAAGAATCTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGGAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGGACTCATCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGCCAAGGAAGTCCTCACTGACTCTTTGAGAACTCTATATATGCAAACCCTTTGGGATGGCCACTAAATTTGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGAGTATGGTAACGTGGTTGACTGAACCACAGCCATGAAAGTGAGCTTCCAGCTCTTCTGCTGTTGCACCGC  296

Query    1  --------------------ATGG--------------------CTCTCCTC----------------------  12
                                ||||                    .|||||||                      
Sbjct  297  AGTCCACATTGCCAGCATTGATGGAACGGGCATCAGCCTCCATCTTCTCCTCAATGGACGTGATCACTGGGCCA  370

Query   13  -----------AGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGG  75
                       ||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCATTGCCTGGAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGG  444

Query   76  ACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGAGTT---G  146
            |||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.||   |
Sbjct  445  ACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATTTTCGG  518

Query  147  TC---------------AGGGGAGTG------------------------TCCA---------TTGACAGCA--  170
            ||               ||.|.||||                        ||||         ||.| ||||  
Sbjct  519  TCTGTCACCCAGGCTAAAGTGCAGTGGTGTCACCTCGGCTCACTGCAACCTCCACTTCCCAGGTTCA-AGCAAT  591

Query  171  ---CCTGCCTCC--------------------------------------------------------------  179
               ||||||||.                                                              
Sbjct  592  TCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGATATCTCTTCCAAATGCATGATGAAGACATTCTTCTC  665

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  666  AACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACATTGGAGATT  739

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  740  TTTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAAAGAAGATGAAACAAATGACCAT  813

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  814  GCAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAA  887

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  888  GCATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTGCACATATTTCAGCCTGAAGGGA  961

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  962  AAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGG  1035

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1036  CCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAACGGAATGT  1109

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1110  ACACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTAATTGTAGCTCACTTTTAAAAAAAC  1183

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1184  ATCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGCAAGGTATTTAATCAGAAGCGATAC  1257

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1258  CTTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGATCTTTGGTCA  1331

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1332  CAATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTTATGAATGTGAAGAATGTGACAAAG  1405

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1406  TTTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGAGGGAAACCATACAAATGTAAGGTT  1479

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1480  TGTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAATTCACACTGGAGAGAAACCTTACAA  1553

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1554  GTGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCCATCGTAGGCTTCATACTGGAGAGA  1627

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1628  AACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAAGAGGATTCAT  1701

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1702  ACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATATAATTCATACCTGGCAAAACATAG  1775

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1776  TATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAACTCTTG  1849

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1850  CACGCCATCATAGACTTCATACTGCAGAGAAACCATACAAATGTGAAGAATGTGACAAAGTTTTCAGGTGCAAA  1923

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1924  TCACACCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTT  1997

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1998  CCGGAGTGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGTG  2071

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2072  GCAAGGTTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATGT  2145

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2146  GAAGAATGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAACC  2219

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2220  GTACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTG  2293

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2294  GAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAGG  2367

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2368  CTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTATA  2441

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2442  CCATCATAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCAC  2515

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2516  ACCTTGCACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGT  2589

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2590  CAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTGAAAGTGTAATGAGTGTGGCAA  2663

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2664  GACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTAAAAGTGTAATG  2737

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2738  AGTGTGGCAACACCTTCCATCACAATTCAACCCTTGTAAGTCACAAAGCCATTCATACTGGAGAGAAACTTTAC  2811

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2812  AAGTGTAATGAATGTGGCAAGGTTTTTAATCAAAAAACAACCCTTGCACGTCATCATAGAATTCATACTGCAGA  2885

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2886  GAAACTTTACAAATAGGAAGAATGTGACAAAGTTTTCGGTTGCAAATCAAACCTTGAAACACATAAGAAAATGC  2959

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2960  ATGCTGAAGAGAAACCACACAGATGTAAGGTTTATGACAAGATTTTTGAATATAATTCATACCTGGCAAAACAT  3033

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3034  ATTAGAATTCAAACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAACACCTTTGGTCAAAATTCATACCT  3107

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3108  TGTAATTCAAAAGGCAATTCGTATTGGAGAGAAACCCTACAAGTGTAATGAATGTGGCATAGTTTTTAATCAAC  3181

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3182  AGTCACACCTTGCAAGTCATCATAGTCTTCATACTGCAGAGAAATCTTACAAATGTGAAGACTGTGACAAAGTT  3255

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3256  GTCAGTCACAAATCACAGCTTGAAAGACAGGAGAATTCATACTGGAGAAAAAACATACAAATGTAAGGTTTGTA  3329

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3330  ACAAGGCTTTTGGGAGTGATTCACACCTGGCACACCATACTAGAATTCACACTGGAGAGAAACCTTACAAGTGC  3403

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3404  AATGAGTGTGGCAAAGCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCAATCCATAGTATAGGGAAACT  3477

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3478  TGACTAATATAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCAAATCATTGGAGAATCCATAATG  3551

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3552  AGAGATCTTACAAGTGTAATAAATGTGACAGATTTTTCAGATATCGTTCATATATTGCTATTCATCATCGAACT  3625

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3626  CATGCTGGAGAGAAACCTTATAAATGTCATGATTGTGGCAAGGTCTTCAGTCAAGTTTCATCCTATGCAAAACA  3699

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3700  TAGGAGGATTCATACAGGAGAGAAACTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCACACCT  3773

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3774  CAATAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGTAAGGTCTTCAGTCCGA  3847

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3848  GATCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCCATTAGTATAGCAAGCCA  3921

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3922  TCAAGCATTAATTGACATTACAGTTAAATGAGCACTGACCTGAGTTTGAGTTGACTTAACATTGAGTTTAAGCA  3995

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 3996  TTAATTGACATTAAACTGTTTATGTTAAGAGGACTGGGCTGGGCACTGTGGCTCACGCCTGCAATGCCAGCACT  4069

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4070  TTGAGAGGCCAAGACTGGTAGGTCACTGGAGGTTAAGAGTTTGAGAACAGCCTGGCCAACAGACGGGAGCCACT  4143

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4144  TTTCCCAGCCTGTGTTTTCATTTCTATTCTTTCTTTCTTTTTTCTTTTTTTTGTTTTTGTTTTTGAGATGGAGT  4217

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4218  CTCTTGCTCTGTCATCCAGGTTGGAGTGCAGTGGCATGATCTTGACTCACTACAACCTCCGCCTCCCAGGTTCA  4291

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4292  AGCGATCCTCCTGCCTCAGTCTCCTGACTAGCTGGGACTACAGGTGCATGCCACCACACCTGGATAATTTTTTG  4365

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4366  TATTTTTAGTAGAGACTGGGTTTCGCTGTGTTAGCCTGGATGGTCTCGATTTTCTGATCTTATGATTCACCCAC  4439

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4440  CTCTACCTCCCGAAGTGCTGAGATTATGGGCGTGAGCCACCGTGACTGGCCTGTTTTTTGTTTCTTTAACAAAA  4513

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4514  AGTTATGGGGATTTCTATGAGTATTGTGTTGAATCTAAATCACATTCGGTTATATAATCATTGAGCAATACTAA  4587

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4588  TTTTTCCAATCAGTATGGATTGTATGTGTATTTATATGTTTTTAATCATTTTGATCAATGTTTGTAGATTTCAA  4661

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4662  GGTACAAACTTCTCACCTTTATATGTTTATTCCTAAATATTTCTTACTTTAAGCTCTTTAGCAAATGGAAGTGG  4735

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4736  TTTTTAATTTTATTTTAAAATTATTTAATGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTATTATTCTAT  4809

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 4810  TCTGCAAATACACTGAATATGTTTATTAGTTCCAGTTGTATTTTGGTTGACTGTGATTTTCTTCACAGATCATG  4883

Query  180  ----------------------------------------  179
                                                    
Sbjct 4884  TCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGA  4923

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