Nucleotide Global Alignment

Description

Query:
TRCN0000478280
Subject:
XR_001753718.2
Aligned Length:
2995
Identities:
172
Gaps:
2816

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGACCAGGAAGCGGATCCCGTGGAGTGAAGGTCGCACCGCGGCGGATTGACTTCTAAAGACTTGGTACGTGA  74

Query    1  -------------------------------------------ATGGCTC-TCCTCAGGGTCTATTGACATTCA  30
                                                       ||||||| ||.||||||||||.|||||||||
Sbjct   75  GGAAAAAACACGGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCTTCAGGGTCTACTGACATTCA  148

Query   31  GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGGGAC  104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  149  GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGAC  222

Query  105  GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGG------------------------AGTTGT-------  147
            |||||||||||||||||||||||||||||||||||||                        ||.|||       
Sbjct  223  GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATC  296

Query  148  --CAGG-------------GGAGT-GTC----------CATTG-----ACA-GC-------------------A  170
              ||||             |.||| |||          |||||     ||| ||                   |
Sbjct  297  AACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATA  370

Query  171  CCTGCCTCC-----------------------------------------------------------------  179
            |.|||.|||                                                                 
Sbjct  371  CTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCAT  444

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  445  GAAGCACTCATGACAAAAACCAAAAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAA  518

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  519  ACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGA  592

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  593  AAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGG  666

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  667  CCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGT  740

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  741  ACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAAC  814

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  815  ATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATAC  888

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  889  CTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGTCACAA  962

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  963  TTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTT  1036

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1037  TTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGT  1110

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1111  GACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATG  1184

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1185  TAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAAC  1258

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1259  CTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATACT  1332

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1333  GGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTAG  1406

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1407  ACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAAC  1480

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1481  GTCATCATAGACTTCATACTGGAAAGAAATCTTAGAAGTGTAAATTTGCAAGGTTTTTAGGCAACAGTCAAACC  1554

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1555  TTGCATGTCATCATAGACTTTATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAAGTTTTCAATTT  1628

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1629  CAAATCACTCCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGG  1702

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1703  ATTTCGGGTGTGATTCACACCTGGCCCAACATACTGGAATTCACACTGGAAAGGAACTGTACAAGTGTAATGAG  1776

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1777  TGTGGCAGAGCCTTTGGTGGTCAGTCAACACTTACTCACCATCAAGCAATCCATGGTATAGGGAAACTTGACTA  1850

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1851  ATGTAATGATTGTCACAAAGTCTTCAGTAATATTACAGCCATTGCAAAACATTGGAGAATCCATAATGAAGGAG  1924

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1925  GTCTTACAAGTGTAATAAATGTGGCAAGTTTTTCAGACATCATTCATAACTTGCAGTTCATTGGCGATCTTATA  1998

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1999  CAGGAGAGAAATCTTACAAATGTGATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTTTTGCAAAACGGGAG  2072

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2073  AATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGAGCAAAGCCTTTACTTCACGTTCACACCACATT  2146

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2147  AGATATCAGAGGATCCATACTGGACAGAAATCTTACAAACGTCCTATGTGTGGCAAGGTCTTCAGTCCGAGGTT  2220

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2221  ACTCCTTGCAGAATATCATAACGTTCATTTTTGAGGATTGATTTCCAAAGACTCATGCTATGTAAGGAAGCCAC  2294

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2295  CAAGAAGGGCAAAGAAAAGGAGCCAGGGACGGCTCTTCCTCAGGGACACTAGACTTTCAGGGATGTGGCTATAG  2368

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2369  ATTTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGCTTTATACAGGGAAGTGATGTTGGAGAAC  2442

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2443  TACAGGAACCTGGAGTTTGTGGGGACATACGTGACATTTGGTGAGATGTGGGACAGGAGGACTCCTTCAGGAGA  2516

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2517  CTGATCCCCTGTCCTGATCTCCATGAGGAGCTCCAGCTACGACCTCAGGTCCTCAGACCAACCAGCCCAAGGAA  2590

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2591  CGTCTCACCAATTTCAAATTGGACAGGAATGTCAGGCCTCTGAGCCCAAGACTGCAGGTATACATCCAGATGGC  2664

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2665  CTGAGGCAACCGAAAAGTACAAAAGAAGTGAAACAGCCAGCCCCTGTCTTAACTGATTGACCAACCTTATGACT  2738

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2739  TTCCATTATGACTTGTTCCTGCCCTGCCCCAACTGATCGATCGACCTTGAGAAATTCTTCTGGACAATGAGTCT  2812

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2813  TATGATCTCCCCACAATGCACCTTGTGACGCTCTCCTCTGCTGACAATAGATAACCACCTTTAACTGTAACTAT  2886

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2887  CCACTGCTTACCCCAGGCCTATAAAACTGCCCCACCCCATCTCCTTTTGCTGACTTCTTTTTCAGACCCAGTCT  2960

Query  180  -----------------------------------  179
                                               
Sbjct 2961  GCCTGCACCCAGGTGAAATAAACAGCCTTGTTGCT  2995

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