Nucleotide Global Alignment

Description

Query:
TRCN0000478280
Subject:
XR_002958275.1
Aligned Length:
2578
Identities:
172
Gaps:
2400

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCGCGTGAGTTTCGCTCTGTTTTATGTGTGCTTCCCAGTCCTGTGGTGCTGCTATACCGGGGACGTTGAGTCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCACAGACCTGGAAATTGCGGCCCCTCTTTCTCAACCCAGAGCAAATTGAGACGTCCGGAGTCTCACTCTGTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCAGGCTGTGAGTGCAGTCTCCTGATCTTGGCTCACTGCAACCTCTGTCTCCTGGGTTCAAGTGATTCTTGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCTCAGCCTACCAAGTAGCTGAGATACAGGATTGACTTCTAAAGACTCTTGGTACCTGAGGAAGAAACCCAGAA  296

Query    1  ----------------------------ATGGCTC-TCCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAG  45
                                        ||||||| |.|||||||||||.||||||||||||||||||||||||
Sbjct  297  GAGGAAGAGGAAAGCAAAGGAGTCGGGGATGGCTCTTTCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAG  370

Query   46  AATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAAT  119
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  371  AATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAAT  444

Query  120  TATAGGAACCTGGTCTCCCTGGA---------------------------GTTGT------CAGG---------  151
            |||||||||||||||||||||||                           .||||      ||||         
Sbjct  445  TATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATGATGAATACATTGTCATCAACAGGGCAAGGCAA  518

Query  152  ----GGAGTG-TC----------CATTGACAG---------------CACCT----GC------CTCC------  179
                |.|||| ||          ||||| |||               |||.|    ||      ||||      
Sbjct  519  TACAGAAGTGATCCACACAGGGACATTG-CAGAGACAAGCAAGTTATCACATTGGAGCATTTTGCTCCCAGGAA  591

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  592  ATTGAGAAAGACATTCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAACAAATGACCATGAAGCACCCATGAC  665

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  666  AGAAATAAAAAAGTTGACTAGTAGTACAGACCGATATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGGTC  739

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  740  AGCTTGAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAAATGT  813

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  814  GAAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAATACATAGGATAATTCATACTGGAGAGAAACC  887

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  888  ATACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCACACCTGGCAAAACATACTAGAATTCACAGGG  961

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  962  GAGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGATCAAAAAGCAACCCTTGCATGTCATCATAGA  1035

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1036  AGTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGACATCACACCTTGTGTA  1109

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1110  CCATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGACCTTCGCTCGAAATTCAG  1183

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1184  TCCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTATAAGTGTAATGAATGTGGCAAGGTTTTTAAG  1257

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1258  CAACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAGAGAAACCTTACAGATGTGAAGAATGCGACAA  1331

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1332  AGTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGG  1405

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1406  TTTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAGAACATCAGAGAGTTCATACTGGAGAGAGACCTTAC  1479

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1480  ACATGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCGTACCTCGCATGTCATCAAAAACTTCATACTGGAGA  1553

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1554  GAAACTTTACGAATGTGAAGAATGTGACAAAGTTTACATTCGCAAATCACACCTTGAAAGACATAGGAGGATTC  1627

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1628  ATACAGGAGAGAAACCTCACAAGTGTGGTGATTGTGGTAAAGCCTTTAATTCACCTTCACACCTTATTAGGCAT  1701

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1702  CAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTTTAGTCTGAGGTCACTCCT  1775

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1776  TGCAGAACATCAGAAAATTCCTTTTGGAGACAATTGTTTCAAGTGCAATGAGTATAGCAAACCATCAAGCATTA  1849

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1850  ATTGACATCAGAGTCAAATCAGCATTGACCTGAGTTTGAGTTGACTTAACATTGATTTCAAGCATTAATCGACA  1923

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1924  TTAAACTGTTTATGTTAAGAGGATTGGGCCAGGCGTGGTGTCTCACACCTGTAATCCCAGCACTTTGAGAGGCC  1997

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1998  AAGACAGATGGAATCTTGCTCTGTCGCCCACGTTGGAGTGCAGTGATGTGATCTCGGTTCACTGCAACATTCAC  2071

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2072  CTCCCAGGTTCATGCAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGATTGATTTCCAGAGACTT  2145

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2146  ATGTTACTTGAGGAAGACACCAAGAAGGCAAAGAAAAGGAGCCAGGGATGGCTCTTCCTCAGGGATACTTGACT  2219

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2220  TTCAGAGATGTGGCTATAGAGTTCTCTTTGCTGGAGTGGAAACGCCTGGACCCTGCACAGAACGCTTTATACAG  2293

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2294  GGCTGTGATGTGGGAGAACTACAGGAACCTGGAGTCTGTGGGTGAGGAAAATGTTCCTCCAGACATGAAGAATC  2367

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2368  TGTCCTTGTGTATCTTGGCTTTTCCTGGTTTTGTATTCTCTTTTGTGATTTTGCCCCATACGTGCTTTTGATGT  2441

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2442  ACACAGCTGGGATTCCAGGCACGTGCCACCATGCCCAGCATGTTATTTTGTATCTTTAGTGGAGATAGGGTTTT  2515

Query  180  --------------------------------------------------------------  179
                                                                          
Sbjct 2516  GCCATGTTGGCCAGGCTCGTCTCGAACTCCTGACCTCCATACCCACCCGCCTCGGCCTCTAA  2577

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