Nucleotide Global Alignment

Description

Query:
TRCN0000478280
Subject:
XR_002958276.1
Aligned Length:
2582
Identities:
172
Gaps:
2404

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGAGTTTCGCTCTGTTTTATGTGTGCTTCCCAGTCCTGTGGTGCTGCTATACCGGGGACGTTGAGTCCCCACAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACCTGGAAATTGCGGCCCCTCTTTCTCAACCCAGAGCAAATTGAGACGTCCGGGTGAGAGTCCAGTCTCACTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTCCTTCAGGCTGTGAGTGCAGTCTCCTGATCTTGGCTCACTGCAACCTCTGTCTCCTGGGTTCAAGTGATTCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGTGCCTCAGCCTACCAAGTAGCTGAGATACAGGATTGACTTCTAAAGACTCTTGGTACCTGAGGAAGAAACCC  296

Query    1  --------------------------------ATGGCTC-TCCTCAGGGTCTATTGACATTCAGGGATGTGGCC  41
                                            ||||||| |.|||||||||||.||||||||||||||||||||
Sbjct  297  AGAAGAGGAAGAGGAAAGCAAAGGAGTCGGGGATGGCTCTTTCTCAGGGTCTACTGACATTCAGGGATGTGGCC  370

Query   42  ATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGA  115
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  371  ATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGA  444

Query  116  GAATTATAGGAACCTGGTCTCCCTGGA---------------------------GTTGT------CAGG-----  151
            |||||||||||||||||||||||||||                           .||||      ||||     
Sbjct  445  GAATTATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATGATGAATACATTGTCATCAACAGGGCAAG  518

Query  152  --------GGAGTG-TC----------CATTGACAG---------------CACCT----GC------CTCC--  179
                    |.|||| ||          ||||| |||               |||.|    ||      ||||  
Sbjct  519  GCAATACAGAAGTGATCCACACAGGGACATTG-CAGAGACAAGCAAGTTATCACATTGGAGCATTTTGCTCCCA  591

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  592  GGAAATTGAGAAAGACATTCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAACAAATGACCATGAAGCACCCA  665

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  666  TGACAGAAATAAAAAAGTTGACTAGTAGTACAGACCGATATGATCAAAGGCATGCTGGAAACAAGCCTATTAAA  739

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  740  GGTCAGCTTGAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAA  813

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  814  ATGTGAAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAATACATAGGATAATTCATACTGGAGAGA  887

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  888  AACCATACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCACACCTGGCAAAACATACTAGAATTCAC  961

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  962  AGGGGAGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGATCAAAAAGCAACCCTTGCATGTCATCA  1035

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1036  TAGAAGTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGACATCACACCTTG  1109

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1110  TGTACCATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGACCTTCGCTCGAAAT  1183

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1184  TCAGTCCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTATAAGTGTAATGAATGTGGCAAGGTTTT  1257

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1258  TAAGCAACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAGAGAAACCTTACAGATGTGAAGAATGCG  1331

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1332  ACAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGT  1405

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1406  AAGGTTTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAGAACATCAGAGAGTTCATACTGGAGAGAGACC  1479

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1480  TTACACATGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCGTACCTCGCATGTCATCAAAAACTTCATACTG  1553

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1554  GAGAGAAACTTTACGAATGTGAAGAATGTGACAAAGTTTACATTCGCAAATCACACCTTGAAAGACATAGGAGG  1627

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1628  ATTCATACAGGAGAGAAACCTCACAAGTGTGGTGATTGTGGTAAAGCCTTTAATTCACCTTCACACCTTATTAG  1701

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1702  GCATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTTTAGTCTGAGGTCAC  1775

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1776  TCCTTGCAGAACATCAGAAAATTCCTTTTGGAGACAATTGTTTCAAGTGCAATGAGTATAGCAAACCATCAAGC  1849

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1850  ATTAATTGACATCAGAGTCAAATCAGCATTGACCTGAGTTTGAGTTGACTTAACATTGATTTCAAGCATTAATC  1923

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1924  GACATTAAACTGTTTATGTTAAGAGGATTGGGCCAGGCGTGGTGTCTCACACCTGTAATCCCAGCACTTTGAGA  1997

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1998  GGCCAAGACAGATGGAATCTTGCTCTGTCGCCCACGTTGGAGTGCAGTGATGTGATCTCGGTTCACTGCAACAT  2071

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2072  TCACCTCCCAGGTTCATGCAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGATTGATTTCCAGAG  2145

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2146  ACTTATGTTACTTGAGGAAGACACCAAGAAGGCAAAGAAAAGGAGCCAGGGATGGCTCTTCCTCAGGGATACTT  2219

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2220  GACTTTCAGAGATGTGGCTATAGAGTTCTCTTTGCTGGAGTGGAAACGCCTGGACCCTGCACAGAACGCTTTAT  2293

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2294  ACAGGGCTGTGATGTGGGAGAACTACAGGAACCTGGAGTCTGTGGGTGAGGAAAATGTTCCTCCAGACATGAAG  2367

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2368  AATCTGTCCTTGTGTATCTTGGCTTTTCCTGGTTTTGTATTCTCTTTTGTGATTTTGCCCCATACGTGCTTTTG  2441

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2442  ATGTACACAGCTGGGATTCCAGGCACGTGCCACCATGCCCAGCATGTTATTTTGTATCTTTAGTGGAGATAGGG  2515

Query  180  ------------------------------------------------------------------  179
                                                                              
Sbjct 2516  TTTTGCCATGTTGGCCAGGCTCGTCTCGAACTCCTGACCTCCATACCCACCCGCCTCGGCCTCTAA  2581

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