Nucleotide Global Alignment

Description

Query:
TRCN0000478280
Subject:
XR_002958279.1
Aligned Length:
2455
Identities:
172
Gaps:
2277

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGAGTTTCGCTCTGTTTTATGTGTGCTTCCCAGTCCTGTGGTGCTGCTATACCGGGGACGTTGAGTCCCCACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACCTGGAAATTGCGGCCCCTCTTTCTCAACCCAGAGCAAATTGAGACGTCCGGGATTGACTTCTAAAGACTCT  148

Query    1  -----------------------------------------------------ATGGCTC-TCCTCAGGGTCTA  20
                                                                 ||||||| |.|||||||||||
Sbjct  149  TGGTACCTGAGGAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCGGGGATGGCTCTTTCTCAGGGTCTA  222

Query   21  TTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCT  94
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCT  296

Query   95  ATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGA--------------------------  142
            ||||||.|||||||||||||||||||||||||||||||||||||||||                          
Sbjct  297  ATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATGATGAATA  370

Query  143  -GTTGT------CAGG-------------GGAGTG-TC----------CATTGACAG---------------CA  170
             .||||      ||||             |.|||| ||          ||||| |||               ||
Sbjct  371  CATTGTCATCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTG-CAGAGACAAGCAAGTTATCA  443

Query  171  CCT----GC------CTCC-------------------------------------------------------  179
            |.|    ||      ||||                                                       
Sbjct  444  CATTGGAGCATTTTGCTCCCAGGAAATTGAGAAAGACATTCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAA  517

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  518  CAAATGACCATGAAGCACCCATGACAGAAATAAAAAAGTTGACTAGTAGTACAGACCGATATGATCAAAGGCAT  591

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  592  GCTGGAAACAAGCCTATTAAAGGTCAGCTTGAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAGAATTCA  665

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  666  TACTGGAGAGAAACCTTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAATACATA  739

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  740  GGATAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCACACCTG  813

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  814  GCAAAACATACTAGAATTCACAGGGGAGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGATCAAAA  887

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  888  AGCAACCCTTGCATGTCATCATAGAAGTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAGACCT  961

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  962  TTAGTCAGACATCACACCTTGTGTACCATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAATGAGTGT  1035

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1036  GGCAAGACCTTCGCTCGAAATTCAGTCCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTATAAGTG  1109

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1110  TAATGAATGTGGCAAGGTTTTTAAGCAACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAGAGAAAC  1183

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1184  CTTACAGATGTGAAGAATGCGACAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATTCATACT  1257

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1258  GGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAGAACATCAGAG  1331

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1332  AGTTCATACTGGAGAGAGACCTTACACATGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCGTACCTCGCAT  1405

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1406  GTCATCAAAAACTTCATACTGGAGAGAAACTTTACGAATGTGAAGAATGTGACAAAGTTTACATTCGCAAATCA  1479

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1480  CACCTTGAAAGACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGGTGATTGTGGTAAAGCCTTTAA  1553

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1554  TTCACCTTCACACCTTATTAGGCATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCA  1627

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1628  AGGTCTTTAGTCTGAGGTCACTCCTTGCAGAACATCAGAAAATTCCTTTTGGAGACAATTGTTTCAAGTGCAAT  1701

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1702  GAGTATAGCAAACCATCAAGCATTAATTGACATCAGAGTCAAATCAGCATTGACCTGAGTTTGAGTTGACTTAA  1775

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1776  CATTGATTTCAAGCATTAATCGACATTAAACTGTTTATGTTAAGAGGATTGGGCCAGGCGTGGTGTCTCACACC  1849

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1850  TGTAATCCCAGCACTTTGAGAGGCCAAGACAGATGGAATCTTGCTCTGTCGCCCACGTTGGAGTGCAGTGATGT  1923

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1924  GATCTCGGTTCACTGCAACATTCACCTCCCAGGTTCATGCAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGA  1997

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1998  CTACAGGATTGATTTCCAGAGACTTATGTTACTTGAGGAAGACACCAAGAAGGCAAAGAAAAGGAGCCAGGGAT  2071

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2072  GGCTCTTCCTCAGGGATACTTGACTTTCAGAGATGTGGCTATAGAGTTCTCTTTGCTGGAGTGGAAACGCCTGG  2145

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2146  ACCCTGCACAGAACGCTTTATACAGGGCTGTGATGTGGGAGAACTACAGGAACCTGGAGTCTGTGGGTGAGGAA  2219

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2220  AATGTTCCTCCAGACATGAAGAATCTGTCCTTGTGTATCTTGGCTTTTCCTGGTTTTGTATTCTCTTTTGTGAT  2293

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2294  TTTGCCCCATACGTGCTTTTGATGTACACAGCTGGGATTCCAGGCACGTGCCACCATGCCCAGCATGTTATTTT  2367

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2368  GTATCTTTAGTGGAGATAGGGTTTTGCCATGTTGGCCAGGCTCGTCTCGAACTCCTGACCTCCATACCCACCCG  2441

Query  180  -------------  179
                         
Sbjct 2442  CCTCGGCCTCTAA  2454

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