Nucleotide Global Alignment

Description

Query:
TRCN0000478540
Subject:
NM_001352782.2
Aligned Length:
2347
Identities:
2170
Gaps:
170

Alignment

Query    1  ------------------------------------------------------------------ATGAATAA  8
                                                                              |.|     
Sbjct    1  ATGGGAGGCTCCCACTCTCAGACCCCGAGGGGCCGGGAACCCGCCGGGGAGAGGCACCCGAGACCCACG-----  69

Query    9  TATATTGAAACTTAAAAG-CTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAACCCCGATCCGATCA  81
                  ||.||     .| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   70  ------GAGAC-----CGCCTCGGATTCTGAAGGTAATTTTGAGACTCCTGAAGCTGAAACCCCGATCCGATCA  132

Query   82  CCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCACAAGAAGC  155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  CCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTGGCAGGACCTGGGGCCAAAAGCCAAGAATCACAAGAAGC  206

Query  156  TGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATGTTCATCTAAGACTTGTTCTAAACCTTCAGAAAATGAAG  229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  207  TGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATGTTCATCTAAGACTTGTTCTAAACCTTCAGAAAATGAAG  280

Query  230  TGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGAATTTCAGAGAAGAACCTGAACATGATTTTAGCAAAATT  303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  281  TGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGAATTTCAGAGAAGAACCTGAACATGATTTTAGCAAAATT  354

Query  304  TCCATCGTGAGGCCATTTTCAATAGAAACGAAGGATTCCACGGATATCTCGGCAGTCCTCGGAACAAAAGCAGC  377
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  355  TCCATCGTGAGGCCATTTTCAATAGAAACGAAGGATTCCACGGATATCTCGGCAGTCCTCGGAACAAAAGCAGC  428

Query  378  TCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCTGCCTTCCAGCCCGCCAGACGCCCTCCAGGACGAGGCGA  451
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  429  TCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCTGCCTTCCAGCCCGCCAGACGCCCTCCAGGACGAGGCGA  502

Query  452  TGACGGAAGGCAGCATGGGGGTCACCCTCGAGGCCTCCGCAGAAGCTGATCTAAAAGCTGGCAACTCCTGTCCA  525
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  503  TGACAGAAGGCAGCATGGGGGTCACCCTCGAGGCCTCCGCAGAAGCTGATCTAAAAGCTGGCAACTCCTGTCCA  576

Query  526  GAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAGCCCAAGCCTGTCCCCCTGAGGAAGAAAGCAATTGGAGG  599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  577  GAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAGCCCAAGCCTGTCCCCCTGAGGAAGAAAGCAATTGGAGG  650

Query  600  AGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCACACCTCTCCCCAAGGCATCCTATCACTTCAGTCCTGAAG  673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  651  AGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCACACCTCTCCCCAAGGCATCCTATCACTTCAGTCCTGAAG  724

Query  674  AGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGACCTTAAAGAAACT  747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  725  AGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATGCCAGGTTCCAGAAGTCTCCCCCTGACCTTAAAGAAACT  798

Query  748  CCCGGCACTCTCAGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAA  821
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  799  CCCGGCACTCTCAGTAGTGACACCAACGACTCAGGGGTTGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAA  872

Query  822  GCTTGAGTTTGATTTCACAGAAGATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGGA  895
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  873  GCTTGAGTTTGATTTCACAGAAGATACAGGAAACATAGAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGGA  946

Query  896  AACTGGGTAGCACACTGACTCCCAAGATACAAAAAGATGGCATCAGTAAGTCAGCAGGTTTAGAACAGCCTACA  969
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  947  AACTGGGTAGCACACTGACTCCCAAGATACAAAAAGATGGCATCAGTAAGTCAGCAGGTTTAGAACAGCCTACA  1020

Query  970  GACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACATCTTCCAAGCCAGATCCTAGTCAGTGGGAGAGCCCCAG  1043
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 1021  GACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACATCTTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAG  1094

Query 1044  CTTCAACCCCTTTGGGAGCCACTCTGTTCTGCAGAACTCCCCACCCCTCTCTTCTGAGGGCTCCTACCACTTTG  1117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095  CTTCAACCCCTTTGGGAGCCACTCTGTTCTGCAGAACTCCCCACCCCTCTCTTCTGAGGGCTCCTACCACTTTG  1168

Query 1118  ACCCAGATAACTTTGACGAATCCATGGATCACTTTAAACCAACTACGACCTTAACAAGCAGTGACTTTTGTTCT  1191
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1169  ACCCAGATAACTTTGACGAATCCATGGATCCCTTTAAACCAACTACGACCTTAACAAGCAGTGACTTTTGTTCT  1242

Query 1192  CCCACTGGTAATCACGTTAATGAAATCTTAGAATCACCCAAGAAGGCAAAGTCGCGTTTAATAACGAGTGGCTG  1265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1243  CCCACTGGTAATCACGTTAATGAAATCTTAGAATCACCCAAGAAGGCAAAGTCGCGTTTAATAACGAGTGGCTG  1316

Query 1266  TAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAAGGGGCAGTGATCTCCC  1339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317  TAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCTGGATGCATGTTCTCGGGATGAAGGGGCAGTGATCTCCC  1390

Query 1340  AGATTTCAGACATTTCTAATAGGGATGGCCATGCTACTGATGAGGAGAAACTGGCATCCACGTCATGTGGTCAG  1413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1391  AGATTTCAGACATTTCTAATAGGGATGGCCATGCTACTGATGAGGAGAAACTGGCATCCACGTCATGTGGTCAG  1464

Query 1414  AAATCAGCTGGTGCCGAGGTGAA---------------------------------------------------  1436
            |||||||||||||||||||||||                                                   
Sbjct 1465  AAATCAGCTGGTGCCGAGGTGAAAGGTGAGCCAGAGGAAGACCTGGAGTACTTTGAATGTTCCAATGTTCCTGT  1538

Query 1437  ------------------------------------AGGCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAG  1474
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct 1539  GTCTACCATAAATCATGCGTTTTCATCCTCAGAAGCAGGCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAG  1612

Query 1475  ACGGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTGCAGAGAAGGCCCCTGTGTCGGTGTCCTGTGGAGGTGAG  1548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1613  ACGGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTGCAGAGAAGGCCCCTGTGTCGGTGTCCTGTGGAGGTGAG  1686

Query 1549  AGCCCCCTGGATGGGATCTGCCTCAGCGAATCAGACAAGACAGCCGTGCTCACCTTAATAAGAGAAGAGATAAT  1622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687  AGCCCCCTGGATGGGATCTGCCTCAGCGAATCAGACAAGACAGCCGTGCTCACCTTAATAAGAGAAGAGATAAT  1760

Query 1623  TACCAAAGAGATTGAAGCAAATGAATGGAAGAAGAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGA  1696
            |||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1761  TACTAAAGAGATTGAAGCAAATGAATGGAAGAAGAAATACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGA  1834

Query 1697  AAATTGTAGCTGAATATGAAAAGACTATTGCTCAAATGATTGAAGATGAACAAAGGACAAGTATGACCTCTCAG  1770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1835  AAATTGTAGCTGAATATGAAAAGACTATTGCTCAAATGATTGAAGATGAACAAAGGACAAGTATGACCTCTCAG  1908

Query 1771  AAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGCCCTGGCTGACCTTAACTCTGTGGAAAGGTCCCTTTC  1844
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1909  AAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAGGCCCTGGCTGACCTTAACTCTGTGGAAAGGTCCCTTTC  1982

Query 1845  TGATCTCTTCAGGAGATATGAGAACCTGAAAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAGA  1918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1983  TGATCTCTTCAGGAGATATGAGAACCTGAAAGGTGTTCTGGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAGA  2056

Query 1919  AATGTGCTCAGGATTACTTAGCCAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCTGAAAATCCACGCAGAA  1992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2057  AATGTGCTCAGGATTACTTAGCCAGAGTTAAACAAGAGGAGCAGCGATACCAGGCCCTGAAAATCCACGCAGAA  2130

Query 1993  GAGAAACTGGACAAAGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCA  2066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2131  GAGAAACTGGACAAAGCCAATGAAGAGATTGCTCAGGTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCA  2204

Query 2067  TGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTG  2140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2205  TGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTCCCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTG  2278

Query 2141  AAGAACTGACAAAAATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTGAC  2193
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2279  AAGAACTGACAAAAATCTGTGATGAGCTGATTGCAAAGCTGGGAAAGACTGAC  2331

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