Nucleotide Global Alignment

Description

Query:
TRCN0000478540
Subject:
NM_001352787.2
Aligned Length:
2311
Identities:
2179
Gaps:
122

Alignment

Query    1  -------------------------------ATGAATAATATATTGAAACTTAAAAGCTCGGATTCTGAAGGTA  43
                                           |||.| ||.|.|   ||.|.|.|||||||||||||||||||||
Sbjct    1  ATGTTTACTCTTCCAAGTACACTGAGATCAAATGCA-AAGACA---AACCATCAAAGCTCGGATTCTGAAGGTA  70

Query   44  ATTTTGAGACTCCTGAAGCTGAAACCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTG  117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   71  ATTTTGAGACTCCTGAAGCTGAAACCCCGATCCGATCACCTTTCAAGGAGTCCTGTGATCCATCACTCGGATTG  144

Query  118  GCAGGACCTGGGGCCAAAAGCCAAGAATCACAAGAAGCTGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATG  191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  145  GCAGGACCTGGGGCCAAAAGCCAAGAATCACAAGAAGCTGATGAACAGCTTGTAGCAGAAGTGGTTGAAAAATG  218

Query  192  TTCATCTAAGACTTGTTCTAAACCTTCAGAAAATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGA  265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  219  TTCATCTAAGACTTGTTCTAAACCTTCAGAAAATGAAGTGCCACAGCAGGCCATTGACTCTCACTCAGTCAAGA  292

Query  266  ATTTCAGAGAAGAACCTGAACATGATTTTAGCAAAATTTCCATCGTGAGGCCATTTTCAATAGAAACGAAGGAT  339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  293  ATTTCAGAGAAGAACCTGAACATGATTTTAGCAAAATTTCCATCGTGAGGCCATTTTCAATAGAAACGAAGGAT  366

Query  340  TCCACGGATATCTCGGCAGTCCTCGGAACAAAAGCAGCTCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCT  413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  367  TCCACGGATATCTCGGCAGTCCTCGGAACAAAAGCAGCTCATGGCTGTGTAACTGCAGTCTCAGGCAAGGCTCT  440

Query  414  GCCTTCCAGCCCGCCAGACGCCCTCCAGGACGAGGCGATGACGGAAGGCAGCATGGGGGTCACCCTCGAGGCCT  487
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  441  GCCTTCCAGCCCGCCAGACGCCCTCCAGGACGAGGCGATGACAGAAGGCAGCATGGGGGTCACCCTCGAGGCCT  514

Query  488  CCGCAGAAGCTGATCTAAAAGCTGGCAACTCCTGTCCAGAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAG  561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  515  CCGCAGAAGCTGATCTAAAAGCTGGCAACTCCTGTCCAGAGCTTGTGCCCAGCAGAAGAAGCAAGCTGAGAAAG  588

Query  562  CCCAAGCCTGTCCCCCTGAGGAAGAAAGCAATTGGAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCAC  635
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  589  CCCAAGCCTGTCCCCCTGAGGAAGAAAGCAATTGGAGGAGAGTTCTCAGACACCAACGCTGCTGTGGAGGGCAC  662

Query  636  ACCTCTCCCCAAGGCATCCTATCACTTCAGTCCTGAAGAGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATG  709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  663  ACCTCTCCCCAAGGCATCCTATCACTTCAGTCCTGAAGAGTTGGATGAGAACACAAGTCCTTTGCTAGGAGATG  736

Query  710  CCAGGTTCCAGAAGTCTCCCCCTGACCTTAAAGAAACTCCCGGCACTCTCAGTAGTGACACCAACGACTCAGGG  783
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  737  CCAGGTTCCAGAAGTCTCCCCCTGACCTTAAAGAAACTCCCGGCACTCTCAGTAGTGACACCAACGACTCAGGG  810

Query  784  GTTGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTTCACAGAAGATACAGGAAACAT  857
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  GTTGAGCTGGGGGAGGAGTCGAGGAGCTCACCTCTCAAGCTTGAGTTTGATTTCACAGAAGATACAGGAAACAT  884

Query  858  AGAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGGAAACTGGGTAGCACACTGACTCCCAAGATACAAAAAG  931
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  885  AGAGGCCAGGAAAGCCCTTCCAAGGAAGCTTGGCAGGAAACTGGGTAGCACACTGACTCCCAAGATACAAAAAG  958

Query  932  ATGGCATCAGTAAGTCAGCAGGTTTAGAACAGCCTACAGACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACA  1005
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  ATGGCATCAGTAAGTCAGCAGGTTTAGAACAGCCTACAGACCCAGTGGCACGAGACGGGCCTCTCTCCCAAACA  1032

Query 1006  TCTTCCAAGCCAGATCCTAGTCAGTGGGAGAGCCCCAGCTTCAACCCCTTTGGGAGCCACTCTGTTCTGCAGAA  1079
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033  TCTTCCAAGCCAGATCCTAGTCAGTGGGAAAGCCCCAGCTTCAACCCCTTTGGGAGCCACTCTGTTCTGCAGAA  1106

Query 1080  CTCCCCACCCCTCTCTTCTGAGGGCTCCTACCACTTTGACCCAGATAACTTTGACGAATCCATGGATCACTTTA  1153
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1107  CTCCCCACCCCTCTCTTCTGAGGGCTCCTACCACTTTGACCCAGATAACTTTGACGAATCCATGGATCCCTTTA  1180

Query 1154  AACCAACTACGACCTTAACAAGCAGTGACTTTTGTTCTCCCACTGGTAATCACGTTAATGAAATCTTAGAATCA  1227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181  AACCAACTACGACCTTAACAAGCAGTGACTTTTGTTCTCCCACTGGTAATCACGTTAATGAAATCTTAGAATCA  1254

Query 1228  CCCAAGAAGGCAAAGTCGCGTTTAATAACGAGTGGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCT  1301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255  CCCAAGAAGGCAAAGTCGCGTTTAATAACGAGTGGCTGTAAGGTGAAGAAGCATGAAACTCAGTCTCTCGCCCT  1328

Query 1302  GGATGCATGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTA  1375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329  GGATGCATGTTCTCGGGATGAAGGGGCAGTGATCTCCCAGATTTCAGACATTTCTAATAGGGATGGCCATGCTA  1402

Query 1376  CTGATGAGGAGAAACTGGCATCCACGTCATGTGGTCAGAAATCAGCTGGTGCCGAGGTGAA-------------  1436
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct 1403  CTGATGAGGAGAAACTGGCATCCACGTCATGTGGTCAGAAATCAGCTGGTGCCGAGGTGAAAGGTGAGCCAGAG  1476

Query 1437  --------------------------------------------------------------------------  1436
                                                                                      
Sbjct 1477  GAAGACCTGGAGTACTTTGAATGTTCCAATGTTCCTGTGTCTACCATAAATCATGCGTTTTCATCCTCAGAAGC  1550

Query 1437  AGGCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTG  1510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551  AGGCATAGAGAAGGAGACGTGCCAGAAGATGGAAGAAGACGGGTCCACTGTGCTTGGGCTGCTGGAGTCCTCTG  1624

Query 1511  CAGAGAAGGCCCCTGTGTCGGTGTCCTGTGGAGGTGAGAGCCCCCTGGATGGGATCTGCCTCAGCGAATCAGAC  1584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1625  CAGAGAAGGCCCCTGTGTCGGTGTCCTGTGGAGGTGAGAGCCCCCTGGATGGGATCTGCCTCAGCGAATCAGAC  1698

Query 1585  AAGACAGCCGTGCTCACCTTAATAAGAGAAGAGATAATTACCAAAGAGATTGAAGCAAATGAATGGAAGAAGAA  1658
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1699  AAGACAGCCGTGCTCACCTTAATAAGAGAAGAGATAATTACTAAAGAGATTGAAGCAAATGAATGGAAGAAGAA  1772

Query 1659  ATACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGAAAATTGTAGCTGAATATGAAAAGACTATTGCTCAAA  1732
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1773  ATACGAAGAGACCCGGCAAGAAGTTTTGGAGATGAGGAAAATTGTAGCTGAATATGAAAAGACTATTGCTCAAA  1846

Query 1733  TGATTGAAGATGAACAAAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAG  1806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1847  TGATTGAAGATGAACAAAGGACAAGTATGACCTCTCAGAAGAGCTTCCAGCAACTGACCATGGAGAAGGAACAG  1920

Query 1807  GCCCTGGCTGACCTTAACTCTGTGGAAAGGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACCTGAAAGGTGT  1880
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921  GCCCTGGCTGACCTTAACTCTGTGGAAAGGTCCCTTTCTGATCTCTTCAGGAGATATGAGAACCTGAAAGGTGT  1994

Query 1881  TCTGGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAGAAATGTGCTCAGGATTACTTAGCCAGAGTTAAACAAG  1954
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1995  TCTGGAAGGGTTCAAGAAGAATGAAGAAGCCTTGAAGAAATGTGCTCAGGATTACTTAGCCAGAGTTAAACAAG  2068

Query 1955  AGGAGCAGCGATACCAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGATTGCTCAG  2028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2069  AGGAGCAGCGATACCAGGCCCTGAAAATCCACGCAGAAGAGAAACTGGACAAAGCCAATGAAGAGATTGCTCAG  2142

Query 2029  GTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTC  2102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2143  GTTCGAACAAAAGCAAAGGCTGAGAGTGCAGCTCTCCATGCTGGACTCCGCAAAGAGCAGATGAAGGTGGAGTC  2216

Query 2103  CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTGACAAAAATCTGTGATGAGCTGATTGCAA  2176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2217  CCTGGAAAGGGCCCTGCAGCAGAAGAACCAAGAAATTGAAGAACTGACAAAAATCTGTGATGAGCTGATTGCAA  2290

Query 2177  AGCTGGGAAAGACTGAC  2193
            |||||||||||||||||
Sbjct 2291  AGCTGGGAAAGACTGAC  2307

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